BLASTX nr result

ID: Coptis24_contig00036271 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00036271
         (229 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001237022.1| uncharacterized protein LOC100305555 precurs...   125   5e-27
ref|XP_004160339.1| PREDICTED: lamin-like protein-like [Cucumis ...   124   8e-27
ref|XP_004137655.1| PREDICTED: lamin-like protein-like [Cucumis ...   124   8e-27
ref|XP_002263869.1| PREDICTED: lamin-like protein [Vitis vinifer...   123   2e-26
emb|CAN70727.1| hypothetical protein VITISV_028080 [Vitis vinifera]   122   4e-26

>ref|NP_001237022.1| uncharacterized protein LOC100305555 precursor [Glycine max]
           gi|255625899|gb|ACU13294.1| unknown [Glycine max]
          Length = 170

 Score =  125 bits (313), Expect = 5e-27
 Identities = 54/60 (90%), Positives = 56/60 (93%)
 Frame = -1

Query: 181 VCATDHIVGANKGWNPGINYTLWANNHTFYVGDLISFRYAKNQYNVFRVNETGYDNCTTE 2
           V ATDHIVGAN+GWNPG NYTLWANNHTFYVGDLISFRY KNQYNVF VN+TGYDNCTTE
Sbjct: 21  VTATDHIVGANRGWNPGFNYTLWANNHTFYVGDLISFRYQKNQYNVFEVNQTGYDNCTTE 80


>ref|XP_004160339.1| PREDICTED: lamin-like protein-like [Cucumis sativus]
          Length = 171

 Score =  124 bits (311), Expect = 8e-27
 Identities = 54/60 (90%), Positives = 56/60 (93%)
 Frame = -1

Query: 181 VCATDHIVGANKGWNPGINYTLWANNHTFYVGDLISFRYAKNQYNVFRVNETGYDNCTTE 2
           V ATDHIVGAN+GWNPGINYTLWANNHTFYVGDLISFRY KNQYNVF VN+TGYDNCT E
Sbjct: 23  VSATDHIVGANRGWNPGINYTLWANNHTFYVGDLISFRYQKNQYNVFEVNQTGYDNCTIE 82


>ref|XP_004137655.1| PREDICTED: lamin-like protein-like [Cucumis sativus]
          Length = 171

 Score =  124 bits (311), Expect = 8e-27
 Identities = 54/60 (90%), Positives = 56/60 (93%)
 Frame = -1

Query: 181 VCATDHIVGANKGWNPGINYTLWANNHTFYVGDLISFRYAKNQYNVFRVNETGYDNCTTE 2
           V ATDHIVGAN+GWNPGINYTLWANNHTFYVGDLISFRY KNQYNVF VN+TGYDNCT E
Sbjct: 23  VSATDHIVGANRGWNPGINYTLWANNHTFYVGDLISFRYQKNQYNVFEVNQTGYDNCTIE 82


>ref|XP_002263869.1| PREDICTED: lamin-like protein [Vitis vinifera]
           gi|298204685|emb|CBI25183.3| unnamed protein product
           [Vitis vinifera]
          Length = 168

 Score =  123 bits (308), Expect = 2e-26
 Identities = 53/60 (88%), Positives = 56/60 (93%)
 Frame = -1

Query: 181 VCATDHIVGANKGWNPGINYTLWANNHTFYVGDLISFRYAKNQYNVFRVNETGYDNCTTE 2
           V ATDHIVGAN+GWNPGINYTLWANNHTFYV DLISFRY KNQYNVF VN+TGYDNCTT+
Sbjct: 18  VTATDHIVGANRGWNPGINYTLWANNHTFYVNDLISFRYQKNQYNVFEVNQTGYDNCTTD 77


>emb|CAN70727.1| hypothetical protein VITISV_028080 [Vitis vinifera]
          Length = 168

 Score =  122 bits (305), Expect = 4e-26
 Identities = 52/60 (86%), Positives = 56/60 (93%)
 Frame = -1

Query: 181 VCATDHIVGANKGWNPGINYTLWANNHTFYVGDLISFRYAKNQYNVFRVNETGYDNCTTE 2
           V ATDHIVGAN+GWNPG+NYTLWANNHTFYV DLISFRY KNQYNVF VN+TGYDNCTT+
Sbjct: 18  VTATDHIVGANRGWNPGMNYTLWANNHTFYVNDLISFRYQKNQYNVFEVNQTGYDNCTTD 77


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