BLASTX nr result
ID: Coptis24_contig00036271
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00036271 (229 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_001237022.1| uncharacterized protein LOC100305555 precurs... 125 5e-27 ref|XP_004160339.1| PREDICTED: lamin-like protein-like [Cucumis ... 124 8e-27 ref|XP_004137655.1| PREDICTED: lamin-like protein-like [Cucumis ... 124 8e-27 ref|XP_002263869.1| PREDICTED: lamin-like protein [Vitis vinifer... 123 2e-26 emb|CAN70727.1| hypothetical protein VITISV_028080 [Vitis vinifera] 122 4e-26 >ref|NP_001237022.1| uncharacterized protein LOC100305555 precursor [Glycine max] gi|255625899|gb|ACU13294.1| unknown [Glycine max] Length = 170 Score = 125 bits (313), Expect = 5e-27 Identities = 54/60 (90%), Positives = 56/60 (93%) Frame = -1 Query: 181 VCATDHIVGANKGWNPGINYTLWANNHTFYVGDLISFRYAKNQYNVFRVNETGYDNCTTE 2 V ATDHIVGAN+GWNPG NYTLWANNHTFYVGDLISFRY KNQYNVF VN+TGYDNCTTE Sbjct: 21 VTATDHIVGANRGWNPGFNYTLWANNHTFYVGDLISFRYQKNQYNVFEVNQTGYDNCTTE 80 >ref|XP_004160339.1| PREDICTED: lamin-like protein-like [Cucumis sativus] Length = 171 Score = 124 bits (311), Expect = 8e-27 Identities = 54/60 (90%), Positives = 56/60 (93%) Frame = -1 Query: 181 VCATDHIVGANKGWNPGINYTLWANNHTFYVGDLISFRYAKNQYNVFRVNETGYDNCTTE 2 V ATDHIVGAN+GWNPGINYTLWANNHTFYVGDLISFRY KNQYNVF VN+TGYDNCT E Sbjct: 23 VSATDHIVGANRGWNPGINYTLWANNHTFYVGDLISFRYQKNQYNVFEVNQTGYDNCTIE 82 >ref|XP_004137655.1| PREDICTED: lamin-like protein-like [Cucumis sativus] Length = 171 Score = 124 bits (311), Expect = 8e-27 Identities = 54/60 (90%), Positives = 56/60 (93%) Frame = -1 Query: 181 VCATDHIVGANKGWNPGINYTLWANNHTFYVGDLISFRYAKNQYNVFRVNETGYDNCTTE 2 V ATDHIVGAN+GWNPGINYTLWANNHTFYVGDLISFRY KNQYNVF VN+TGYDNCT E Sbjct: 23 VSATDHIVGANRGWNPGINYTLWANNHTFYVGDLISFRYQKNQYNVFEVNQTGYDNCTIE 82 >ref|XP_002263869.1| PREDICTED: lamin-like protein [Vitis vinifera] gi|298204685|emb|CBI25183.3| unnamed protein product [Vitis vinifera] Length = 168 Score = 123 bits (308), Expect = 2e-26 Identities = 53/60 (88%), Positives = 56/60 (93%) Frame = -1 Query: 181 VCATDHIVGANKGWNPGINYTLWANNHTFYVGDLISFRYAKNQYNVFRVNETGYDNCTTE 2 V ATDHIVGAN+GWNPGINYTLWANNHTFYV DLISFRY KNQYNVF VN+TGYDNCTT+ Sbjct: 18 VTATDHIVGANRGWNPGINYTLWANNHTFYVNDLISFRYQKNQYNVFEVNQTGYDNCTTD 77 >emb|CAN70727.1| hypothetical protein VITISV_028080 [Vitis vinifera] Length = 168 Score = 122 bits (305), Expect = 4e-26 Identities = 52/60 (86%), Positives = 56/60 (93%) Frame = -1 Query: 181 VCATDHIVGANKGWNPGINYTLWANNHTFYVGDLISFRYAKNQYNVFRVNETGYDNCTTE 2 V ATDHIVGAN+GWNPG+NYTLWANNHTFYV DLISFRY KNQYNVF VN+TGYDNCTT+ Sbjct: 18 VTATDHIVGANRGWNPGMNYTLWANNHTFYVNDLISFRYQKNQYNVFEVNQTGYDNCTTD 77