BLASTX nr result

ID: Coptis24_contig00036270 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00036270
         (293 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAW66639.1| ribulose-1,5-bisphosphate carboxylase/oxygenase l...   205   4e-51
gb|AAA16665.1| ribulose-1,5-bisphosphate carboxylase/oxygenase l...   205   4e-51
gb|AAB93790.1| ribulose-1,5-bisphosphate carboxylase/oxygenase l...   205   4e-51
gb|AAC97876.1| ribulose-1,5-bisphosphate carboxylase/oxygenase l...   205   4e-51
gb|AAG32306.1|AF284694_1 ribulose-1,5-bisphosphate carboxylase/o...   205   4e-51

>gb|AAW66639.1| ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit
           [Platanus orientalis]
          Length = 475

 Score =  205 bits (521), Expect = 4e-51
 Identities = 97/97 (100%), Positives = 97/97 (100%)
 Frame = -1

Query: 293 LDFTKDDENVNSQPFMRWRDRFLFCAEAIYKAQAETGEIKGHYLNATAGTCEEMIKRAVF 114
           LDFTKDDENVNSQPFMRWRDRFLFCAEAIYKAQAETGEIKGHYLNATAGTCEEMIKRAVF
Sbjct: 197 LDFTKDDENVNSQPFMRWRDRFLFCAEAIYKAQAETGEIKGHYLNATAGTCEEMIKRAVF 256

Query: 113 ARELGVPIVMHDYLTGGFTANTSLSHYCRDNGLLLHI 3
           ARELGVPIVMHDYLTGGFTANTSLSHYCRDNGLLLHI
Sbjct: 257 ARELGVPIVMHDYLTGGFTANTSLSHYCRDNGLLLHI 293


>gb|AAA16665.1| ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit,
           partial (chloroplast) [Bergenia cordifolia]
          Length = 465

 Score =  205 bits (521), Expect = 4e-51
 Identities = 97/97 (100%), Positives = 97/97 (100%)
 Frame = -1

Query: 293 LDFTKDDENVNSQPFMRWRDRFLFCAEAIYKAQAETGEIKGHYLNATAGTCEEMIKRAVF 114
           LDFTKDDENVNSQPFMRWRDRFLFCAEAIYKAQAETGEIKGHYLNATAGTCEEMIKRAVF
Sbjct: 187 LDFTKDDENVNSQPFMRWRDRFLFCAEAIYKAQAETGEIKGHYLNATAGTCEEMIKRAVF 246

Query: 113 ARELGVPIVMHDYLTGGFTANTSLSHYCRDNGLLLHI 3
           ARELGVPIVMHDYLTGGFTANTSLSHYCRDNGLLLHI
Sbjct: 247 ARELGVPIVMHDYLTGGFTANTSLSHYCRDNGLLLHI 283


>gb|AAB93790.1| ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit,
           partial (chloroplast) [Groenlandia densa]
          Length = 394

 Score =  205 bits (521), Expect = 4e-51
 Identities = 97/97 (100%), Positives = 97/97 (100%)
 Frame = -1

Query: 293 LDFTKDDENVNSQPFMRWRDRFLFCAEAIYKAQAETGEIKGHYLNATAGTCEEMIKRAVF 114
           LDFTKDDENVNSQPFMRWRDRFLFCAEAIYKAQAETGEIKGHYLNATAGTCEEMIKRAVF
Sbjct: 188 LDFTKDDENVNSQPFMRWRDRFLFCAEAIYKAQAETGEIKGHYLNATAGTCEEMIKRAVF 247

Query: 113 ARELGVPIVMHDYLTGGFTANTSLSHYCRDNGLLLHI 3
           ARELGVPIVMHDYLTGGFTANTSLSHYCRDNGLLLHI
Sbjct: 248 ARELGVPIVMHDYLTGGFTANTSLSHYCRDNGLLLHI 284


>gb|AAC97876.1| ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit
           [Zantedeschia aethiopica]
          Length = 479

 Score =  205 bits (521), Expect = 4e-51
 Identities = 97/97 (100%), Positives = 97/97 (100%)
 Frame = -1

Query: 293 LDFTKDDENVNSQPFMRWRDRFLFCAEAIYKAQAETGEIKGHYLNATAGTCEEMIKRAVF 114
           LDFTKDDENVNSQPFMRWRDRFLFCAEAIYKAQAETGEIKGHYLNATAGTCEEMIKRAVF
Sbjct: 197 LDFTKDDENVNSQPFMRWRDRFLFCAEAIYKAQAETGEIKGHYLNATAGTCEEMIKRAVF 256

Query: 113 ARELGVPIVMHDYLTGGFTANTSLSHYCRDNGLLLHI 3
           ARELGVPIVMHDYLTGGFTANTSLSHYCRDNGLLLHI
Sbjct: 257 ARELGVPIVMHDYLTGGFTANTSLSHYCRDNGLLLHI 293


>gb|AAG32306.1|AF284694_1 ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit,
           partial (chloroplast) [Carpobrotus chilensis]
          Length = 470

 Score =  205 bits (521), Expect = 4e-51
 Identities = 97/97 (100%), Positives = 97/97 (100%)
 Frame = -1

Query: 293 LDFTKDDENVNSQPFMRWRDRFLFCAEAIYKAQAETGEIKGHYLNATAGTCEEMIKRAVF 114
           LDFTKDDENVNSQPFMRWRDRFLFCAEAIYKAQAETGEIKGHYLNATAGTCEEMIKRAVF
Sbjct: 187 LDFTKDDENVNSQPFMRWRDRFLFCAEAIYKAQAETGEIKGHYLNATAGTCEEMIKRAVF 246

Query: 113 ARELGVPIVMHDYLTGGFTANTSLSHYCRDNGLLLHI 3
           ARELGVPIVMHDYLTGGFTANTSLSHYCRDNGLLLHI
Sbjct: 247 ARELGVPIVMHDYLTGGFTANTSLSHYCRDNGLLLHI 283


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