BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00036266
         (261 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF98195.1|AC000107_18 F17F8.24 [Arabidopsis thaliana]              58   3e-14
ref|XP_002534138.1| Protein YIF1A, putative [Ricinus communis] g...    58   4e-14
ref|XP_002451711.1| hypothetical protein SORBIDRAFT_04g006430 [S...    59   4e-14
ref|NP_001148495.1| LOC100282110 [Zea mays] gi|195619792|gb|ACG3...    59   4e-14
gb|ACF82724.1| unknown [Zea mays] gi|413926289|gb|AFW66221.1| pr...    59   4e-14

>gb|AAF98195.1|AC000107_18 F17F8.24 [Arabidopsis thaliana]
          Length = 286

 Score = 58.2 bits (139), Expect(2) = 3e-14
 Identities = 25/27 (92%), Positives = 26/27 (96%)
 Frame = -2

Query: 260 SDPQYYFQVNGQYVRNKLKVILFPFLH 180
           SDPQYYFQVN QYVRNKLKV+LFPFLH
Sbjct: 66  SDPQYYFQVNDQYVRNKLKVVLFPFLH 92



 Score = 45.1 bits (105), Expect(2) = 3e-14
 Identities = 18/25 (72%), Positives = 22/25 (88%)
 Frame = -3

Query: 76  SSIQGHWTRITKPVDGRLSYKPPAF 2
           S+ QGHWTRI++PV GRLSYKPP +
Sbjct: 104 SNPQGHWTRISEPVGGRLSYKPPIY 128


>ref|XP_002534138.1| Protein YIF1A, putative [Ricinus communis]
           gi|223525796|gb|EEF28242.1| Protein YIF1A, putative
           [Ricinus communis]
          Length = 269

 Score = 58.2 bits (139), Expect(2) = 4e-14
 Identities = 25/27 (92%), Positives = 26/27 (96%)
 Frame = -2

Query: 260 SDPQYYFQVNGQYVRNKLKVILFPFLH 180
           SDPQYYFQVN QYVRNKLKV+LFPFLH
Sbjct: 63  SDPQYYFQVNDQYVRNKLKVVLFPFLH 89



 Score = 44.3 bits (103), Expect(2) = 4e-14
 Identities = 17/22 (77%), Positives = 20/22 (90%)
 Frame = -3

Query: 67  QGHWTRITKPVDGRLSYKPPAF 2
           +GHWTRIT+PV GRLSYKPP +
Sbjct: 90  RGHWTRITEPVGGRLSYKPPIY 111


>ref|XP_002451711.1| hypothetical protein SORBIDRAFT_04g006430 [Sorghum bicolor]
           gi|241931542|gb|EES04687.1| hypothetical protein
           SORBIDRAFT_04g006430 [Sorghum bicolor]
          Length = 267

 Score = 58.9 bits (141), Expect(2) = 4e-14
 Identities = 26/27 (96%), Positives = 26/27 (96%)
 Frame = -2

Query: 260 SDPQYYFQVNGQYVRNKLKVILFPFLH 180
           SDPQYYFQVN QYVRNKLKVILFPFLH
Sbjct: 63  SDPQYYFQVNSQYVRNKLKVILFPFLH 89



 Score = 43.5 bits (101), Expect(2) = 4e-14
 Identities = 17/20 (85%), Positives = 19/20 (95%)
 Frame = -3

Query: 67  QGHWTRITKPVDGRLSYKPP 8
           +GHWTRIT+PV GRLSYKPP
Sbjct: 90  RGHWTRITEPVGGRLSYKPP 109


>ref|NP_001148495.1| LOC100282110 [Zea mays] gi|195619792|gb|ACG31726.1| protein YIF1A
           [Zea mays]
          Length = 267

 Score = 58.9 bits (141), Expect(2) = 4e-14
 Identities = 26/27 (96%), Positives = 26/27 (96%)
 Frame = -2

Query: 260 SDPQYYFQVNGQYVRNKLKVILFPFLH 180
           SDPQYYFQVN QYVRNKLKVILFPFLH
Sbjct: 63  SDPQYYFQVNSQYVRNKLKVILFPFLH 89



 Score = 43.5 bits (101), Expect(2) = 4e-14
 Identities = 17/20 (85%), Positives = 19/20 (95%)
 Frame = -3

Query: 67  QGHWTRITKPVDGRLSYKPP 8
           +GHWTRIT+PV GRLSYKPP
Sbjct: 90  RGHWTRITEPVGGRLSYKPP 109


>gb|ACF82724.1| unknown [Zea mays] gi|413926289|gb|AFW66221.1| protein YIF1A [Zea
           mays]
          Length = 267

 Score = 58.9 bits (141), Expect(2) = 4e-14
 Identities = 26/27 (96%), Positives = 26/27 (96%)
 Frame = -2

Query: 260 SDPQYYFQVNGQYVRNKLKVILFPFLH 180
           SDPQYYFQVN QYVRNKLKVILFPFLH
Sbjct: 63  SDPQYYFQVNSQYVRNKLKVILFPFLH 89



 Score = 43.5 bits (101), Expect(2) = 4e-14
 Identities = 17/20 (85%), Positives = 19/20 (95%)
 Frame = -3

Query: 67  QGHWTRITKPVDGRLSYKPP 8
           +GHWTRIT+PV GRLSYKPP
Sbjct: 90  RGHWTRITEPVGGRLSYKPP 109