BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00036255
         (339 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510773.1| ATP-dependent RNA helicase, putative [Ricinu...   100   2e-19
ref|XP_002318357.1| predicted protein [Populus trichocarpa] gi|2...    99   4e-19
ref|XP_002334091.1| predicted protein [Populus trichocarpa] gi|2...    99   4e-19
ref|XP_004156439.1| PREDICTED: probable pre-mRNA-splicing factor...    99   5e-19
ref|XP_004139208.1| PREDICTED: uncharacterized protein LOC101216...    99   5e-19

>ref|XP_002510773.1| ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223551474|gb|EEF52960.1| ATP-dependent RNA helicase,
           putative [Ricinus communis]
          Length = 1177

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 67/156 (42%), Positives = 75/156 (48%), Gaps = 45/156 (28%)
 Frame = +1

Query: 7   PNSSKPKRMTSPDRWEAKQLMAAGVLXXXXXXXXXXXXXXXXX----------------- 135
           P+    KRM+SP+RWEAKQL+A+GVL                                  
Sbjct: 346 PSRRPLKRMSSPERWEAKQLIASGVLGVQEYPMYDDEGDGLLYQEGGAEEELEIELNEDE 405

Query: 136 PAFLHGQTRYSLDTSPVKIFRN------RAAALQSALIKXXXXXXXXXXXTM-------- 273
           PAFL GQTRYS+D SPVKIF+N      RAAALQSALIK           TM        
Sbjct: 406 PAFLQGQTRYSVDMSPVKIFKNPEGSLSRAAALQSALIKERREVREQQQRTMLDSIPKDL 465

Query: 274 --------------HLAQALRGIGLSTYDMPEWKKD 339
                         HLAQ LRG+GLS YDMPEWKKD
Sbjct: 466 NRPWEDPMPETGERHLAQELRGVGLSAYDMPEWKKD 501


>ref|XP_002318357.1| predicted protein [Populus trichocarpa] gi|222859030|gb|EEE96577.1|
           predicted protein [Populus trichocarpa]
          Length = 1207

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 66/156 (42%), Positives = 75/156 (48%), Gaps = 45/156 (28%)
 Frame = +1

Query: 7   PNSSKPKRMTSPDRWEAKQLMAAGVLXXXXXXXXXXXXXXXXX----------------- 135
           P+    KRM+SP++WEAKQL+A+GVL                                  
Sbjct: 376 PSRRPLKRMSSPEKWEAKQLIASGVLSVQEHPMYDDEVDGFLYQEEGVEEELEIEMNEDE 435

Query: 136 PAFLHGQTRYSLDTSPVKIFRN------RAAALQSALIKXXXXXXXXXXXTM-------- 273
           PAFL GQTRYS+D SPVKIF+N      RAAALQSALIK           TM        
Sbjct: 436 PAFLQGQTRYSVDVSPVKIFKNPEGSLSRAAALQSALIKERREVRDQQQRTMLDSIPKDL 495

Query: 274 --------------HLAQALRGIGLSTYDMPEWKKD 339
                         HLAQ LRG+GLS YDMPEWKKD
Sbjct: 496 NRPWEDPMPETGERHLAQELRGVGLSAYDMPEWKKD 531


>ref|XP_002334091.1| predicted protein [Populus trichocarpa] gi|222839603|gb|EEE77940.1|
           predicted protein [Populus trichocarpa]
          Length = 332

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 66/156 (42%), Positives = 75/156 (48%), Gaps = 45/156 (28%)
 Frame = +1

Query: 7   PNSSKPKRMTSPDRWEAKQLMAAGVLXXXXXXXXXXXXXXXXX----------------- 135
           P+    KRM+SP++WEAKQL+A+GVL                                  
Sbjct: 56  PSRRPLKRMSSPEKWEAKQLIASGVLSVQEHPMYDDEVDGFLYQEEGVEEELEIEMNEDE 115

Query: 136 PAFLHGQTRYSLDTSPVKIFRN------RAAALQSALIKXXXXXXXXXXXTM-------- 273
           PAFL GQTRYS+D SPVKIF+N      RAAALQSALIK           TM        
Sbjct: 116 PAFLQGQTRYSVDVSPVKIFKNPEGSLSRAAALQSALIKERREVRDQQQRTMLDSIPKDL 175

Query: 274 --------------HLAQALRGIGLSTYDMPEWKKD 339
                         HLAQ LRG+GLS YDMPEWKKD
Sbjct: 176 NRPWEDPMPETGERHLAQELRGVGLSAYDMPEWKKD 211


>ref|XP_004156439.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
           helicase-like [Cucumis sativus]
          Length = 1181

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 66/156 (42%), Positives = 75/156 (48%), Gaps = 45/156 (28%)
 Frame = +1

Query: 7   PNSSKPKRMTSPDRWEAKQLMAAGVLXXXXXXXXXXXXXXXXX----------------- 135
           P+    KRM+SP+RWEAKQL+A+GVL                                  
Sbjct: 350 PSRRPLKRMSSPERWEAKQLIASGVLSVSEYPSYDDEGDGLLYQEEGAEEELEIELNEDE 409

Query: 136 PAFLHGQTRYSLDTSPVKIFRN------RAAALQSALIKXXXXXXXXXXXTM-------- 273
           PAFL GQ+RYS+D SPVKIF+N      RAAALQSALIK           TM        
Sbjct: 410 PAFLQGQSRYSIDMSPVKIFKNPEGSLSRAAALQSALIKERREVREQQQRTMLDSIPKDL 469

Query: 274 --------------HLAQALRGIGLSTYDMPEWKKD 339
                         HLAQ LRG+GLS YDMPEWKKD
Sbjct: 470 NRPWEDPMPETGERHLAQELRGVGLSAYDMPEWKKD 505


>ref|XP_004139208.1| PREDICTED: uncharacterized protein LOC101216792 [Cucumis sativus]
          Length = 1218

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 66/156 (42%), Positives = 75/156 (48%), Gaps = 45/156 (28%)
 Frame = +1

Query: 7   PNSSKPKRMTSPDRWEAKQLMAAGVLXXXXXXXXXXXXXXXXX----------------- 135
           P+    KRM+SP+RWEAKQL+A+GVL                                  
Sbjct: 387 PSRRPLKRMSSPERWEAKQLIASGVLSVSEYPSYDDEGDGLLYQEEGAEEELEIELNEDE 446

Query: 136 PAFLHGQTRYSLDTSPVKIFRN------RAAALQSALIKXXXXXXXXXXXTM-------- 273
           PAFL GQ+RYS+D SPVKIF+N      RAAALQSALIK           TM        
Sbjct: 447 PAFLQGQSRYSIDMSPVKIFKNPEGSLSRAAALQSALIKERREVREQQQRTMLDSIPKDL 506

Query: 274 --------------HLAQALRGIGLSTYDMPEWKKD 339
                         HLAQ LRG+GLS YDMPEWKKD
Sbjct: 507 NRPWEDPMPETGERHLAQELRGVGLSAYDMPEWKKD 542