BLASTX nr result

ID: Coptis24_contig00036249 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00036249
         (288 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532882.1| conserved hypothetical protein [Ricinus comm...   111   7e-23
ref|XP_002309973.1| predicted protein [Populus trichocarpa] gi|2...   106   2e-21
emb|CBI38427.3| unnamed protein product [Vitis vinifera]               97   1e-18

>ref|XP_002532882.1| conserved hypothetical protein [Ricinus communis]
           gi|223527367|gb|EEF29511.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 302

 Score =  111 bits (277), Expect = 7e-23
 Identities = 48/71 (67%), Positives = 60/71 (84%)
 Frame = +1

Query: 55  CNSMQSSPNFGLDWPSPFQLGPSTFILLSCPPPTSSLTIKGTPICDDTVNSHLCGLIHTC 234
           C SM  SPN GLDW SPFQLGPSTF+LLSCPPPTSSLT+KG+P+CD + +S+LC  I+TC
Sbjct: 97  CTSMHQSPNLGLDWASPFQLGPSTFLLLSCPPPTSSLTMKGSPVCDAS-SSYLCASIYTC 155

Query: 235 PAMVSLGLSIF 267
           P+++ LGL +F
Sbjct: 156 PSVIGLGLPLF 166


>ref|XP_002309973.1| predicted protein [Populus trichocarpa] gi|222852876|gb|EEE90423.1|
           predicted protein [Populus trichocarpa]
          Length = 307

 Score =  106 bits (264), Expect = 2e-21
 Identities = 47/71 (66%), Positives = 57/71 (80%)
 Frame = +1

Query: 55  CNSMQSSPNFGLDWPSPFQLGPSTFILLSCPPPTSSLTIKGTPICDDTVNSHLCGLIHTC 234
           C SMQ SPN GLDW SPFQLG STF+LLSC PPTSSL IKG+P+CD   +S+LC  I+TC
Sbjct: 101 CTSMQQSPNLGLDWASPFQLGSSTFLLLSCTPPTSSLNIKGSPVCD--TSSYLCASIYTC 158

Query: 235 PAMVSLGLSIF 267
           P+++ LGL +F
Sbjct: 159 PSVIGLGLPLF 169


>emb|CBI38427.3| unnamed protein product [Vitis vinifera]
          Length = 300

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 49/72 (68%), Positives = 56/72 (77%), Gaps = 1/72 (1%)
 Frame = +1

Query: 55  CNSMQSSPNFGLDWPSPFQLGPSTFILLSCPPPTSSLTIKGT-PICDDTVNSHLCGLIHT 231
           C SMQ SPN GLDW SPFQLGPS FILLSCPP   SLT K + PICD ++ SHLC  I+T
Sbjct: 100 CTSMQPSPNLGLDWASPFQLGPSAFILLSCPP---SLTSKASPPICDPSL-SHLCASIYT 155

Query: 232 CPAMVSLGLSIF 267
           CP++VSLGL +F
Sbjct: 156 CPSVVSLGLPLF 167


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