BLASTX nr result
ID: Coptis24_contig00036249
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00036249 (288 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002532882.1| conserved hypothetical protein [Ricinus comm... 111 7e-23 ref|XP_002309973.1| predicted protein [Populus trichocarpa] gi|2... 106 2e-21 emb|CBI38427.3| unnamed protein product [Vitis vinifera] 97 1e-18 >ref|XP_002532882.1| conserved hypothetical protein [Ricinus communis] gi|223527367|gb|EEF29511.1| conserved hypothetical protein [Ricinus communis] Length = 302 Score = 111 bits (277), Expect = 7e-23 Identities = 48/71 (67%), Positives = 60/71 (84%) Frame = +1 Query: 55 CNSMQSSPNFGLDWPSPFQLGPSTFILLSCPPPTSSLTIKGTPICDDTVNSHLCGLIHTC 234 C SM SPN GLDW SPFQLGPSTF+LLSCPPPTSSLT+KG+P+CD + +S+LC I+TC Sbjct: 97 CTSMHQSPNLGLDWASPFQLGPSTFLLLSCPPPTSSLTMKGSPVCDAS-SSYLCASIYTC 155 Query: 235 PAMVSLGLSIF 267 P+++ LGL +F Sbjct: 156 PSVIGLGLPLF 166 >ref|XP_002309973.1| predicted protein [Populus trichocarpa] gi|222852876|gb|EEE90423.1| predicted protein [Populus trichocarpa] Length = 307 Score = 106 bits (264), Expect = 2e-21 Identities = 47/71 (66%), Positives = 57/71 (80%) Frame = +1 Query: 55 CNSMQSSPNFGLDWPSPFQLGPSTFILLSCPPPTSSLTIKGTPICDDTVNSHLCGLIHTC 234 C SMQ SPN GLDW SPFQLG STF+LLSC PPTSSL IKG+P+CD +S+LC I+TC Sbjct: 101 CTSMQQSPNLGLDWASPFQLGSSTFLLLSCTPPTSSLNIKGSPVCD--TSSYLCASIYTC 158 Query: 235 PAMVSLGLSIF 267 P+++ LGL +F Sbjct: 159 PSVIGLGLPLF 169 >emb|CBI38427.3| unnamed protein product [Vitis vinifera] Length = 300 Score = 97.1 bits (240), Expect = 1e-18 Identities = 49/72 (68%), Positives = 56/72 (77%), Gaps = 1/72 (1%) Frame = +1 Query: 55 CNSMQSSPNFGLDWPSPFQLGPSTFILLSCPPPTSSLTIKGT-PICDDTVNSHLCGLIHT 231 C SMQ SPN GLDW SPFQLGPS FILLSCPP SLT K + PICD ++ SHLC I+T Sbjct: 100 CTSMQPSPNLGLDWASPFQLGPSAFILLSCPP---SLTSKASPPICDPSL-SHLCASIYT 155 Query: 232 CPAMVSLGLSIF 267 CP++VSLGL +F Sbjct: 156 CPSVVSLGLPLF 167