BLASTX nr result
ID: Coptis24_contig00036247
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00036247
(544 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI28241.3| unnamed protein product [Vitis vinifera] 71 1e-21
ref|XP_003550816.1| PREDICTED: uncharacterized protein LOC100783... 65 1e-20
ref|XP_003541477.1| PREDICTED: uncharacterized protein LOC100800... 64 9e-20
ref|XP_003549145.1| PREDICTED: zinc finger BED domain-containing... 67 9e-20
ref|NP_001136571.1| uncharacterized protein LOC100216693 [Zea ma... 60 2e-19
>emb|CBI28241.3| unnamed protein product [Vitis vinifera]
Length = 839
Score = 71.2 bits (173), Expect(3) = 1e-21
Identities = 39/85 (45%), Positives = 55/85 (64%)
Frame = -3
Query: 257 LCESEMWATETNCVQSNAKYEVEVYLEEGIYVGCDGTFDVLNWWKANILKFRILSKMARD 78
L + +++ ET+ Q K E++ YLEE + FD+L WWK N LK+ LSKMARD
Sbjct: 636 LSDFDVYILETSSQQM--KSELDQYLEESVLPRVH-EFDLLGWWKLNKLKYPTLSKMARD 692
Query: 77 ILSIPVTSVAYESAFSAAGRVIDDH 3
ILSIPV+SVA ES + G+ +D++
Sbjct: 693 ILSIPVSSVAVESIYDTVGKEMDEY 717
Score = 41.6 bits (96), Expect(3) = 1e-21
Identities = 15/39 (38%), Positives = 27/39 (69%)
Frame = -3
Query: 539 MVKAMKDKFDKYWEECNLLMAIGVVLDPLKQIEIYRVCF 423
+ K M++K DKYW++C L++AI V +DP ++++ F
Sbjct: 535 LAKPMQEKVDKYWKDCGLVLAIAVAMDPRFKMKLVEFSF 573
Score = 35.4 bits (80), Expect(3) = 1e-21
Identities = 15/38 (39%), Positives = 27/38 (71%)
Frame = -1
Query: 448 KLKYIEFAFNKLYPTQSAEDKLKVVRDSMIELFEDYVS 335
K+K +EF+F K+Y ++A ++VV + + ELF +YV+
Sbjct: 565 KMKLVEFSFPKIYGDEAAPTCIRVVDEGLHELFLEYVA 602
>ref|XP_003550816.1| PREDICTED: uncharacterized protein LOC100783258 [Glycine max]
Length = 1154
Score = 65.5 bits (158), Expect(3) = 1e-20
Identities = 38/85 (44%), Positives = 52/85 (61%)
Frame = -3
Query: 257 LCESEMWATETNCVQSNAKYEVEVYLEEGIYVGCDGTFDVLNWWKANILKFRILSKMARD 78
L + +++ ET+ Q K E++ YLEE + FDVL WWK N LK+ LSKMARD
Sbjct: 1038 LTDFDVYIMETSSHQM--KSELDQYLEESLLPRVPD-FDVLGWWKLNKLKYPTLSKMARD 1094
Query: 77 ILSIPVTSVAYESAFSAAGRVIDDH 3
ILS+PV+SV ES F + +D +
Sbjct: 1095 ILSVPVSSVPPESVFDTKVKEMDQY 1119
Score = 43.1 bits (100), Expect(3) = 1e-20
Identities = 16/39 (41%), Positives = 28/39 (71%)
Frame = -3
Query: 539 MVKAMKDKFDKYWEECNLLMAIGVVLDPLKQIEIYRVCF 423
+ K M+ K DKYW++C+L++AI VV+DP ++++ F
Sbjct: 937 LTKPMQQKIDKYWKDCSLVLAIAVVMDPRFKMKLVEFSF 975
Score = 36.2 bits (82), Expect(3) = 1e-20
Identities = 16/38 (42%), Positives = 27/38 (71%)
Frame = -1
Query: 448 KLKYIEFAFNKLYPTQSAEDKLKVVRDSMIELFEDYVS 335
K+K +EF+F K+Y + A + +K+V D + ELF +YV+
Sbjct: 967 KMKLVEFSFTKIYG-EDAHEYVKIVDDGIHELFHEYVA 1003
>ref|XP_003541477.1| PREDICTED: uncharacterized protein LOC100800468 [Glycine max]
Length = 1100
Score = 63.5 bits (153), Expect(3) = 9e-20
Identities = 37/85 (43%), Positives = 52/85 (61%)
Frame = -3
Query: 257 LCESEMWATETNCVQSNAKYEVEVYLEEGIYVGCDGTFDVLNWWKANILKFRILSKMARD 78
L + +++ ET+ Q K E++ YLEE + FDVL WWK N LK+ LSKMARD
Sbjct: 984 LTDFDVYIMETSNHQM--KSELDQYLEESLLPRVPD-FDVLGWWKLNKLKYPTLSKMARD 1040
Query: 77 ILSIPVTSVAYESAFSAAGRVIDDH 3
ILS+PV+S+ ES F + +D +
Sbjct: 1041 ILSVPVSSLPPESVFDTKVKEMDQY 1065
Score = 42.0 bits (97), Expect(3) = 9e-20
Identities = 15/39 (38%), Positives = 28/39 (71%)
Frame = -3
Query: 539 MVKAMKDKFDKYWEECNLLMAIGVVLDPLKQIEIYRVCF 423
+ K M+ K DKYW++C++++AI VV+DP ++++ F
Sbjct: 883 LTKPMQQKIDKYWKDCSVVLAIAVVMDPRFKMKLVEFSF 921
Score = 36.2 bits (82), Expect(3) = 9e-20
Identities = 16/38 (42%), Positives = 27/38 (71%)
Frame = -1
Query: 448 KLKYIEFAFNKLYPTQSAEDKLKVVRDSMIELFEDYVS 335
K+K +EF+F K+Y + A + +K+V D + ELF +YV+
Sbjct: 913 KMKLVEFSFTKIYG-EDAHEYVKIVDDGIHELFHEYVT 949
>ref|XP_003549145.1| PREDICTED: zinc finger BED domain-containing protein 1-like [Glycine
max]
Length = 1038
Score = 66.6 bits (161), Expect(3) = 9e-20
Identities = 38/85 (44%), Positives = 54/85 (63%)
Frame = -3
Query: 257 LCESEMWATETNCVQSNAKYEVEVYLEEGIYVGCDGTFDVLNWWKANILKFRILSKMARD 78
L + + + ET Q+ K E++ YLEE + FDVL WWK N +K+ LSKMARD
Sbjct: 923 LTDFDAYIMETTSQQT--KSELDQYLEESLLPRVPD-FDVLAWWKLNKIKYPTLSKMARD 979
Query: 77 ILSIPVTSVAYESAFSAAGRVIDDH 3
ILSIPV++VA +S F + + ID++
Sbjct: 980 ILSIPVSTVAPDSVFYSKSKEIDEY 1004
Score = 42.7 bits (99), Expect(3) = 9e-20
Identities = 16/37 (43%), Positives = 26/37 (70%)
Frame = -3
Query: 533 KAMKDKFDKYWEECNLLMAIGVVLDPLKQIEIYRVCF 423
K M +K DKYW EC+L++A+ VV+DP ++++ F
Sbjct: 839 KIMSEKIDKYWRECSLVLALAVVMDPRFKMKLVEFSF 875
Score = 32.3 bits (72), Expect(3) = 9e-20
Identities = 15/38 (39%), Positives = 25/38 (65%)
Frame = -1
Query: 448 KLKYIEFAFNKLYPTQSAEDKLKVVRDSMIELFEDYVS 335
K+K +EF+F K+Y + A ++ V D + ELF +YV+
Sbjct: 867 KMKLVEFSFTKIY-GEDAHFYIRTVDDGIQELFHEYVA 903
>ref|NP_001136571.1| uncharacterized protein LOC100216693 [Zea mays]
gi|194696216|gb|ACF82192.1| unknown [Zea mays]
Length = 503
Score = 60.5 bits (145), Expect(3) = 2e-19
Identities = 36/88 (40%), Positives = 55/88 (62%), Gaps = 3/88 (3%)
Frame = -3
Query: 257 LCESEMWATETNCVQSNAKYEVEVYLEEGIYVGCDGTFDVLNWWKANILKFRILSKMARD 78
L + +M+ +E Q + K E+E YL+E + FD+LNWWK N +KF LS+MA D
Sbjct: 390 LLDFDMYLSEIQSSQPS-KPELEQYLDESLTPRTQ-EFDILNWWKLNRVKFPTLSRMACD 447
Query: 77 ILSIPVTSVAYESAFSAAG---RVIDDH 3
IL+IP++ V+ S+ AG R++DD+
Sbjct: 448 ILAIPMSMVSSGSSIFTAGTGSRMLDDY 475
Score = 42.0 bits (97), Expect(3) = 2e-19
Identities = 14/28 (50%), Positives = 24/28 (85%)
Frame = -3
Query: 539 MVKAMKDKFDKYWEECNLLMAIGVVLDP 456
+ K M ++FDKYW++C+L++A+ VV+DP
Sbjct: 287 IAKDMHERFDKYWKDCSLVLAVAVVMDP 314
Score = 38.5 bits (88), Expect(3) = 2e-19
Identities = 19/55 (34%), Positives = 36/55 (65%), Gaps = 10/55 (18%)
Frame = -1
Query: 448 KLKYIEFAFNKLYPTQSAEDKLKVVRDSMIELFEDYVS----------KEADGGN 314
K+K +EF++ K+Y ++A+ +KVV D++ EL+E+YV+ ++ +GGN
Sbjct: 317 KMKLVEFSYTKIYGAEAAKH-VKVVNDAVHELYEEYVAHPLPLTPAYVEQGEGGN 370