BLASTX nr result

ID: Coptis24_contig00036246 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00036246
         (305 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308651.1| predicted protein [Populus trichocarpa] gi|2...    77   1e-12
ref|XP_004136472.1| PREDICTED: U-box domain-containing protein 1...    71   8e-11
ref|XP_003603432.1| hypothetical protein MTR_3g107650 [Medicago ...    71   8e-11
ref|XP_002515549.1| conserved hypothetical protein [Ricinus comm...    69   4e-10

>ref|XP_002308651.1| predicted protein [Populus trichocarpa] gi|222854627|gb|EEE92174.1|
           predicted protein [Populus trichocarpa]
          Length = 386

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 39/61 (63%), Positives = 50/61 (81%)
 Frame = +3

Query: 123 KLLETFTQCLAEAQSDSREAQRKALRTLASLTKVSPPNRNLLAQIHGAIDTLVGLSRSSS 302
           +L ET T+CLA+ QSDS +AQRKAL+TLA+LTKVSP NR+LLAQ  G + TL+ L++ SS
Sbjct: 117 RLRETITECLADVQSDSVDAQRKALQTLAALTKVSPQNRSLLAQTDGVVSTLLTLTKISS 176

Query: 303 S 305
           S
Sbjct: 177 S 177


>ref|XP_004136472.1| PREDICTED: U-box domain-containing protein 11-like [Cucumis
           sativus] gi|449503554|ref|XP_004162060.1| PREDICTED:
           U-box domain-containing protein 11-like [Cucumis
           sativus]
          Length = 320

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 33/58 (56%), Positives = 47/58 (81%)
 Frame = +3

Query: 132 ETFTQCLAEAQSDSREAQRKALRTLASLTKVSPPNRNLLAQIHGAIDTLVGLSRSSSS 305
           +T T+C+A A+SD+ E Q KAL+ L ++T+VSP +RNLL Q+ G+I TL+GLS+SSSS
Sbjct: 22  KTITECMAGARSDAHEVQEKALQNLVTITQVSPLHRNLLVQVDGSISTLIGLSKSSSS 79


>ref|XP_003603432.1| hypothetical protein MTR_3g107650 [Medicago truncatula]
           gi|355492480|gb|AES73683.1| hypothetical protein
           MTR_3g107650 [Medicago truncatula]
          Length = 316

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 36/63 (57%), Positives = 45/63 (71%)
 Frame = +3

Query: 117 SEKLLETFTQCLAEAQSDSREAQRKALRTLASLTKVSPPNRNLLAQIHGAIDTLVGLSRS 296
           S ++ +T  +CL   QSDS E Q K L+TLA++TKVSP NR LLAQI GAI TL  L+ +
Sbjct: 8   SSRVFDTINECLILVQSDSHETQEKGLQTLAAVTKVSPQNRTLLAQIDGAISTLATLTNA 67

Query: 297 SSS 305
           SSS
Sbjct: 68  SSS 70


>ref|XP_002515549.1| conserved hypothetical protein [Ricinus communis]
           gi|223545493|gb|EEF46998.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 358

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 35/57 (61%), Positives = 44/57 (77%)
 Frame = +3

Query: 132 ETFTQCLAEAQSDSREAQRKALRTLASLTKVSPPNRNLLAQIHGAIDTLVGLSRSSS 302
           ET  QC+++AQSDS E Q+KAL TLAS+TKVSP NR+L+AQ  GAI   + L+ SSS
Sbjct: 59  ETIAQCVSDAQSDSIEVQQKALHTLASMTKVSPHNRSLVAQTDGAISAFLMLTESSS 115


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