BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00036234
         (317 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEJ07891.1| putative coat protein [Pepper cryptic virus 1]         108   4e-22
ref|YP_002364402.1| hypothetical protein RSCV3_s2gp1 [Raphanus s...    87   1e-15
ref|YP_006390090.1| coat protein [Persimmon cryptic virus] gi|38...    86   4e-15
gb|ACZ54927.1| hypothetical protein [Mulberry cryptic virus 1]         79   5e-13
gb|AEJ07893.1| putative coat protein [Pepper cryptic virus 2]          78   7e-13

>gb|AEJ07891.1| putative coat protein [Pepper cryptic virus 1]
          Length = 412

 Score =  108 bits (271), Expect = 4e-22
 Identities = 54/111 (48%), Positives = 73/111 (65%), Gaps = 6/111 (5%)
 Frame = -3

Query: 315 NIKGVSENTLYIPIVSSSVAWT-NEGN--PFNIQDFILDRCLFRVILSMMKG---WKMYS 154
           +I+   ENTL+IPI+  +  W  NE N  PF I +F L+  LF  +L+++K    +K+ +
Sbjct: 159 HIQHTPENTLWIPILCENYDWDRNEANHNPFGITNFTLNSNLFYGLLAILKERKEFKLST 218

Query: 153 TTTDTVGRPFWLFDWHSKDTVCVWFPMEGNYTLEDVCLAYIVGVACTPNLG 1
            TT+T+GRP WLFDWH    VC WFP E N+  +DV  AYI+GVACTP LG
Sbjct: 219 LTTNTIGRPCWLFDWHDNVQVCAWFPREANFNSQDVTAAYIIGVACTPKLG 269


>ref|YP_002364402.1| hypothetical protein RSCV3_s2gp1 [Raphanus sativus cryptic virus 3]
           gi|217039789|gb|ACJ76982.1| hypothetical protein
           [Raphanus sativus cryptic virus 3]
          Length = 374

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 40/108 (37%), Positives = 67/108 (62%), Gaps = 3/108 (2%)
 Frame = -3

Query: 315 NIKGVSENTLYIPIVSSSVAWTNEGNPFNIQDFILDRCLFRVILSMMKGWKMYSTT---T 145
           +I G  E+ +Y+P++S +    N+ NPF I +++    LF  I++ MK  K ++     +
Sbjct: 161 HIVGNPEDVMYVPLISEATD-VNQVNPFGINNYVHQPELFSAIVATMKDRKKFNMVPLPS 219

Query: 144 DTVGRPFWLFDWHSKDTVCVWFPMEGNYTLEDVCLAYIVGVACTPNLG 1
           +  GRP WLFDWH++D +C  F  EGN+  ED+ +A+++G ACT  +G
Sbjct: 220 NYSGRPSWLFDWHAEDQICAPFQPEGNFNNEDIAMAFVLGTACTSLIG 267


>ref|YP_006390090.1| coat protein [Persimmon cryptic virus] gi|388877113|emb|CCH50610.1|
           coat protein [Persimmon cryptic virus]
          Length = 415

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 39/109 (35%), Positives = 65/109 (59%), Gaps = 4/109 (3%)
 Frame = -3

Query: 315 NIKGVSENTLYIPIVSSSVAWTNEGNPFNIQDFILDRCLFRVILSMM----KGWKMYSTT 148
           +I G  E++LYIP++++ V W N+ +PF I  + ++  L + +L +M      W+    +
Sbjct: 174 HIPGGLEDSLYIPLIANHVQWGNQ-SPFGINHYAINESLVQGLLDVMDLKNNTWRTVPLS 232

Query: 147 TDTVGRPFWLFDWHSKDTVCVWFPMEGNYTLEDVCLAYIVGVACTPNLG 1
            DT+GRP WL DW        WFP E +++ ED+  A+I+G+ C+P LG
Sbjct: 233 HDTLGRPMWLLDWRQNQAYA-WFPQENHFSKEDLIAAHILGIPCSPRLG 280


>gb|ACZ54927.1| hypothetical protein [Mulberry cryptic virus 1]
          Length = 324

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 42/110 (38%), Positives = 64/110 (58%), Gaps = 5/110 (4%)
 Frame = -3

Query: 315 NIKGVSENTLYIPIVSSSVAWTNEG-NPFNIQDFILDRCLFRVILSMMKG----WKMYST 151
           +I+   E+TLYIP+VS+++    E  N F + +F LD  +   IL++M      W     
Sbjct: 125 HIQNSLEDTLYIPLVSTTINLEAENMNIFGMNNFYLDENIVLAILNIMDAPRNDWNTVPL 184

Query: 150 TTDTVGRPFWLFDWHSKDTVCVWFPMEGNYTLEDVCLAYIVGVACTPNLG 1
           +T+T+GRP WLFD+        WFPME N++  D+   +I+G+ CTP LG
Sbjct: 185 STNTLGRPGWLFDYRLGKAYS-WFPMESNFSRVDLIAPHILGIPCTPRLG 233


>gb|AEJ07893.1| putative coat protein [Pepper cryptic virus 2]
          Length = 430

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 43/114 (37%), Positives = 65/114 (57%), Gaps = 9/114 (7%)
 Frame = -3

Query: 315 NIKGVSENTLYIPIVSSSVAWTNEGNPFNIQDFILDRC--LFRVILSMMKG----WKMYS 154
           +IK   E+ +YIP +++++  TN  NPF + +   DR       I+  MK     W++  
Sbjct: 171 HIKLALEDCIYIPRIATNMNITNP-NPFGLTEATWDRDADFAYSIMDRMKAPGSRWRVEP 229

Query: 153 TTTDTVGRPFWLFDWH---SKDTVCVWFPMEGNYTLEDVCLAYIVGVACTPNLG 1
             TDT+GRP WL DWH   ++     WFP EGNY++ED+   +I+G A TP +G
Sbjct: 230 LVTDTLGRPGWLLDWHQVGAQQQAYAWFPSEGNYSMEDLIAPHIIGEALTPLMG 283