BLASTX nr result

ID: Coptis24_contig00036228 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00036228
         (254 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17922.3| unnamed protein product [Vitis vinifera]               76   3e-12
ref|XP_002275124.1| PREDICTED: guanylate-binding protein 4-like ...    76   3e-12
emb|CAN71361.1| hypothetical protein VITISV_039421 [Vitis vinifera]    76   3e-12
ref|XP_002306811.1| predicted protein [Populus trichocarpa] gi|2...    62   5e-08
ref|XP_003536798.1| PREDICTED: guanylate-binding protein 4-like ...    61   1e-07

>emb|CBI17922.3| unnamed protein product [Vitis vinifera]
          Length = 602

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 37/48 (77%), Positives = 40/48 (83%)
 Frame = -1

Query: 146 MKFWTWVIFLCFFGSGSSSIHDFRQAFPIVEPDSGHTKLRLSREGLEA 3
           + FW   IFLC F SGSSSI +FRQAFPIVEPD GHTKLRL+REGLEA
Sbjct: 8   LAFW---IFLCLFASGSSSIENFRQAFPIVEPDPGHTKLRLAREGLEA 52


>ref|XP_002275124.1| PREDICTED: guanylate-binding protein 4-like [Vitis vinifera]
          Length = 674

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 37/48 (77%), Positives = 40/48 (83%)
 Frame = -1

Query: 146 MKFWTWVIFLCFFGSGSSSIHDFRQAFPIVEPDSGHTKLRLSREGLEA 3
           + FW   IFLC F SGSSSI +FRQAFPIVEPD GHTKLRL+REGLEA
Sbjct: 80  LAFW---IFLCLFASGSSSIENFRQAFPIVEPDPGHTKLRLAREGLEA 124


>emb|CAN71361.1| hypothetical protein VITISV_039421 [Vitis vinifera]
          Length = 246

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 37/48 (77%), Positives = 40/48 (83%)
 Frame = -1

Query: 146 MKFWTWVIFLCFFGSGSSSIHDFRQAFPIVEPDSGHTKLRLSREGLEA 3
           + FW   IFLC F SGSSSI +FRQAFPIVEPD GHTKLRL+REGLEA
Sbjct: 124 LAFW---IFLCLFASGSSSIENFRQAFPIVEPDPGHTKLRLAREGLEA 168


>ref|XP_002306811.1| predicted protein [Populus trichocarpa] gi|222856260|gb|EEE93807.1|
           predicted protein [Populus trichocarpa]
          Length = 663

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 30/52 (57%), Positives = 36/52 (69%), Gaps = 4/52 (7%)
 Frame = -1

Query: 146 MKFWTWVIF----LCFFGSGSSSIHDFRQAFPIVEPDSGHTKLRLSREGLEA 3
           MK   W++F    LC F SGS SI +F +AFPI+EPD  HTKL L+ EGLEA
Sbjct: 1   MKISRWILFYWLFLCVFASGSLSIDNFNRAFPIIEPDPNHTKLHLASEGLEA 52


>ref|XP_003536798.1| PREDICTED: guanylate-binding protein 4-like [Glycine max]
          Length = 601

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 31/41 (75%), Positives = 33/41 (80%)
 Frame = -1

Query: 125 IFLCFFGSGSSSIHDFRQAFPIVEPDSGHTKLRLSREGLEA 3
           +FL    S SSSI +F QAFPIVEPD GHTKLRLSREGLEA
Sbjct: 13  LFLSPTPSSSSSIDNFHQAFPIVEPDPGHTKLRLSREGLEA 53


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