BLASTX nr result
ID: Coptis24_contig00036228
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00036228 (254 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI17922.3| unnamed protein product [Vitis vinifera] 76 3e-12 ref|XP_002275124.1| PREDICTED: guanylate-binding protein 4-like ... 76 3e-12 emb|CAN71361.1| hypothetical protein VITISV_039421 [Vitis vinifera] 76 3e-12 ref|XP_002306811.1| predicted protein [Populus trichocarpa] gi|2... 62 5e-08 ref|XP_003536798.1| PREDICTED: guanylate-binding protein 4-like ... 61 1e-07 >emb|CBI17922.3| unnamed protein product [Vitis vinifera] Length = 602 Score = 75.9 bits (185), Expect = 3e-12 Identities = 37/48 (77%), Positives = 40/48 (83%) Frame = -1 Query: 146 MKFWTWVIFLCFFGSGSSSIHDFRQAFPIVEPDSGHTKLRLSREGLEA 3 + FW IFLC F SGSSSI +FRQAFPIVEPD GHTKLRL+REGLEA Sbjct: 8 LAFW---IFLCLFASGSSSIENFRQAFPIVEPDPGHTKLRLAREGLEA 52 >ref|XP_002275124.1| PREDICTED: guanylate-binding protein 4-like [Vitis vinifera] Length = 674 Score = 75.9 bits (185), Expect = 3e-12 Identities = 37/48 (77%), Positives = 40/48 (83%) Frame = -1 Query: 146 MKFWTWVIFLCFFGSGSSSIHDFRQAFPIVEPDSGHTKLRLSREGLEA 3 + FW IFLC F SGSSSI +FRQAFPIVEPD GHTKLRL+REGLEA Sbjct: 80 LAFW---IFLCLFASGSSSIENFRQAFPIVEPDPGHTKLRLAREGLEA 124 >emb|CAN71361.1| hypothetical protein VITISV_039421 [Vitis vinifera] Length = 246 Score = 75.9 bits (185), Expect = 3e-12 Identities = 37/48 (77%), Positives = 40/48 (83%) Frame = -1 Query: 146 MKFWTWVIFLCFFGSGSSSIHDFRQAFPIVEPDSGHTKLRLSREGLEA 3 + FW IFLC F SGSSSI +FRQAFPIVEPD GHTKLRL+REGLEA Sbjct: 124 LAFW---IFLCLFASGSSSIENFRQAFPIVEPDPGHTKLRLAREGLEA 168 >ref|XP_002306811.1| predicted protein [Populus trichocarpa] gi|222856260|gb|EEE93807.1| predicted protein [Populus trichocarpa] Length = 663 Score = 62.0 bits (149), Expect = 5e-08 Identities = 30/52 (57%), Positives = 36/52 (69%), Gaps = 4/52 (7%) Frame = -1 Query: 146 MKFWTWVIF----LCFFGSGSSSIHDFRQAFPIVEPDSGHTKLRLSREGLEA 3 MK W++F LC F SGS SI +F +AFPI+EPD HTKL L+ EGLEA Sbjct: 1 MKISRWILFYWLFLCVFASGSLSIDNFNRAFPIIEPDPNHTKLHLASEGLEA 52 >ref|XP_003536798.1| PREDICTED: guanylate-binding protein 4-like [Glycine max] Length = 601 Score = 60.8 bits (146), Expect = 1e-07 Identities = 31/41 (75%), Positives = 33/41 (80%) Frame = -1 Query: 125 IFLCFFGSGSSSIHDFRQAFPIVEPDSGHTKLRLSREGLEA 3 +FL S SSSI +F QAFPIVEPD GHTKLRLSREGLEA Sbjct: 13 LFLSPTPSSSSSIDNFHQAFPIVEPDPGHTKLRLSREGLEA 53