BLASTX nr result
ID: Coptis24_contig00036208
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00036208 (610 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002331338.1| predicted protein [Populus trichocarpa] gi|2... 84 2e-14 ref|XP_002467234.1| hypothetical protein SORBIDRAFT_01g021750 [S... 78 1e-12 ref|XP_002438569.1| hypothetical protein SORBIDRAFT_10g022040 [S... 74 2e-11 emb|CAN68153.1| hypothetical protein VITISV_009302 [Vitis vinifera] 74 2e-11 emb|CAN67224.1| hypothetical protein VITISV_029053 [Vitis vinifera] 74 3e-11 >ref|XP_002331338.1| predicted protein [Populus trichocarpa] gi|222873371|gb|EEF10502.1| predicted protein [Populus trichocarpa] Length = 819 Score = 84.3 bits (207), Expect = 2e-14 Identities = 56/205 (27%), Positives = 88/205 (42%), Gaps = 3/205 (1%) Frame = -1 Query: 607 DHKSSGCFYTWTNN-GDGILRKWSKIDRCLINSLWTSMFPSSGVEFLPQGLSDHSPIVI- 434 D + SG YTW+N + ++ + K+DR L+N W FP S FLP G+SDHSP+V+ Sbjct: 553 DLRYSGMHYTWSNQCPENLIMR--KLDRVLVNEKWNLKFPLSEARFLPSGMSDHSPMVVK 610 Query: 433 AISNSYTCRPPFKFCNYWLVNPSFKETLINCW-FISHDNPSFMXXXXXXXXXXXXKGWPR 257 I N + PF+F + W+ + F + W S P + K + Sbjct: 611 VIGNDQNKKKPFRFFDMWMDHDEFMPLVKKVWDQNSRGCPMYQLCCKLRKLKQELKLFNM 670 Query: 256 LSSSNLQKLVESTRANLEDIQMXXXXXXXXXXXXXLERIRRTELCDLMLMEEYDLMQRTN 77 SN+ V + ++ Q ER + + EE Q+ Sbjct: 671 AHFSNISDRVRDAKNKMDKAQQALHTAHENPILCMRERDVVHKYASTVRAEESFFKQKAR 730 Query: 76 TDWLSFGDKCNAFFNNSVKEKKTRN 2 WLS GD+ ++F+ SV ++ RN Sbjct: 731 IQWLSLGDQNTSYFHKSVNGRQNRN 755 >ref|XP_002467234.1| hypothetical protein SORBIDRAFT_01g021750 [Sorghum bicolor] gi|241921088|gb|EER94232.1| hypothetical protein SORBIDRAFT_01g021750 [Sorghum bicolor] Length = 426 Score = 78.2 bits (191), Expect = 1e-12 Identities = 53/204 (25%), Positives = 90/204 (44%), Gaps = 6/204 (2%) Frame = -1 Query: 595 SGCFYTWTNNGDGILRKWSKIDRCLINSLWTSMFPSSGVEFLPQGLSDHSPIVIAI-SNS 419 SG YTWTN + ++DRCL N+ W M+P + V LP SDH+PI+ + SN+ Sbjct: 181 SGPAYTWTNKRFSTTPTFERLDRCLANAEWCMMYPRTTVYHLPMLRSDHTPILALLDSNT 240 Query: 418 YTCRPPFKFCNYWLVNPSFKETLINCWFIS-----HDNPSFMXXXXXXXXXXXXKGWPRL 254 Y PF+F N+WL+ ++ET W S H ++ P+L Sbjct: 241 YNNTKPFRFENWWLMEQDYEETAKKSWQRSTNRLFHQKTKYLAVDLKKWCRKK----PKL 296 Query: 253 SSSNLQKLVESTRANLEDIQMXXXXXXXXXXXXXLERIRRTELCDLMLMEEYDLMQRTNT 74 S+ +++ED+ + L+ L+ +E+ +QR Sbjct: 297 SNQ---------LSSVEDLLLEEQSKPPSQQDFHLQMKLAEHHQQLLDKDEHYHLQRAKK 347 Query: 73 DWLSFGDKCNAFFNNSVKEKKTRN 2 +W GD+ FF+ ++ ++ +N Sbjct: 348 NWAIHGDRNTHFFHQAIVKRTRKN 371 >ref|XP_002438569.1| hypothetical protein SORBIDRAFT_10g022040 [Sorghum bicolor] gi|241916792|gb|EER89936.1| hypothetical protein SORBIDRAFT_10g022040 [Sorghum bicolor] Length = 1088 Score = 74.3 bits (181), Expect = 2e-11 Identities = 58/206 (28%), Positives = 89/206 (43%), Gaps = 3/206 (1%) Frame = -1 Query: 610 YDHKSSGCFYTWTNNGDGILRKWSKIDRCLINSLWTSMFPSSGVEFLPQGLSDHSPIVIA 431 +D G YTW+N + ++DR N+ W + FP++ V LP SDH+PI +A Sbjct: 176 FDLGYHGPAYTWSNKRFSSFPTYERLDRFFGNAEWCANFPNTSVFHLPMLYSDHAPI-LA 234 Query: 430 ISNSYTCRP---PFKFCNYWLVNPSFKETLINCWFISHDNPSFMXXXXXXXXXXXXKGWP 260 + NS CR PF+F N+WL+ F ET W SH + + W Sbjct: 235 VLNS-VCRKANHPFRFENWWLLTEDFGETARQSWKKSH---ARLFHLKTHYLGKDLCKWR 290 Query: 259 RLSSSNLQKLVESTRANLEDIQMXXXXXXXXXXXXXLERIRRTELCDLMLMEEYDLMQRT 80 R +N +L + ANL +Q L + D++ EE QR Sbjct: 291 RSKQNNSSRL-KWVEANLLHVQSLPPTRNNISLQKHLISLHE----DILAKEEAYHRQRY 345 Query: 79 NTDWLSFGDKCNAFFNNSVKEKKTRN 2 +W GD+ FF+ ++ ++ RN Sbjct: 346 KKNWAVAGDRNTKFFHQAILKRARRN 371 >emb|CAN68153.1| hypothetical protein VITISV_009302 [Vitis vinifera] Length = 1323 Score = 74.3 bits (181), Expect = 2e-11 Identities = 53/196 (27%), Positives = 88/196 (44%), Gaps = 3/196 (1%) Frame = -1 Query: 583 YTWTNNGDGILRKWSKIDRCLINSLWTSMFPSSGVEFLPQGLSDHSPIVIAISNSYTCRP 404 +TW+N + + K ++DR L ++ W +FP E +P+ SDH PIV+ +N + P Sbjct: 473 FTWSNLQESSVCK--RLDRFLYSNEWGQLFPQGLQEAVPRRTSDHWPIVLD-TNPFKWGP 529 Query: 403 P-FKFCNYWLVNPSFKETLINCW--FISHDNPSFMXXXXXXXXXXXXKGWPRLSSSNLQK 233 F+F N WL +PSFKE N W F + K W ++S L++ Sbjct: 530 TLFRFENMWLQHPSFKENFRNWWRGFQGNGWEGHKFMRRLQFVKANLKEWNKVSFGELKE 589 Query: 232 LVESTRANLEDIQMXXXXXXXXXXXXXLERIRRTELCDLMLMEEYDLMQRTNTDWLSFGD 53 +S +L + +R+ EL +L+L EE Q+ W+ GD Sbjct: 590 RKKSILNDLANFDAIEQVGGLTSNLLVQRALRKGELEELILREEIHWRQKARVKWVKEGD 649 Query: 52 KCNAFFNNSVKEKKTR 5 + FF+ +++ R Sbjct: 650 YNSKFFHKVANDRRNR 665 >emb|CAN67224.1| hypothetical protein VITISV_029053 [Vitis vinifera] Length = 1120 Score = 73.6 bits (179), Expect = 3e-11 Identities = 54/196 (27%), Positives = 88/196 (44%), Gaps = 3/196 (1%) Frame = -1 Query: 583 YTWTNNGDGILRKWSKIDRCLINSLWTSMFPSSGVEFLPQGLSDHSPIVIAISNSYTCRP 404 +TW+N + + K ++DR L ++ W +FP S E LP+ SDH PIV+ +N + P Sbjct: 256 FTWSNMQEHPVCK--RLDRFLYSNEWEQLFPQSLQEVLPRWTSDHWPIVLE-TNPFKWDP 312 Query: 403 -PFKFCNYWLVNPSFKETLINCW--FISHDNPSFMXXXXXXXXXXXXKGWPRLSSSNLQK 233 PF+F N WL +PSFKE+ + W F K W + S ++ + Sbjct: 313 TPFRFENMWLQHPSFKESFKSWWREFQGDGWEGHKFMRKLQFLRANLKEWNKTSFGDVIE 372 Query: 232 LVESTRANLEDIQMXXXXXXXXXXXXXLERIRRTELCDLMLMEEYDLMQRTNTDWLSFGD 53 +S +L + +R+ EL +++L EE Q+ W+ GD Sbjct: 373 RKKSILLDLANFDSMEQEGGLSPELLIQRALRKGELEEVILREEIHWRQKARVKWVKEGD 432 Query: 52 KCNAFFNNSVKEKKTR 5 + FF+ K+ R Sbjct: 433 CNSKFFHKVANGKRNR 448