BLASTX nr result

ID: Coptis24_contig00036205 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00036205
         (264 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310296.1| predicted protein [Populus trichocarpa] gi|2...    90   2e-16
ref|XP_002510484.1| protein with unknown function [Ricinus commu...    89   4e-16
ref|XP_002306906.1| predicted protein [Populus trichocarpa] gi|2...    89   4e-16
emb|CBI19800.3| unnamed protein product [Vitis vinifera]               88   8e-16
ref|XP_002280668.1| PREDICTED: probable LRR receptor-like serine...    88   8e-16

>ref|XP_002310296.1| predicted protein [Populus trichocarpa] gi|222853199|gb|EEE90746.1|
           predicted protein [Populus trichocarpa]
          Length = 1126

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 47/88 (53%), Positives = 57/88 (64%)
 Frame = +1

Query: 1   DWRGISCYNTQVHELRLPRLQLSGPLTPQXXXXXXXXXXXXXXXXXXGTIPYSLSKCRRL 180
           DWRG+ C N +V ELRLPRLQL G L+ Q                  GT+P+SL+KC  L
Sbjct: 55  DWRGVFCTNNRVTELRLPRLQLRGQLSDQFASLTSLRKISLRSNFLNGTLPHSLAKCTLL 114

Query: 181 RAIFLQYNSFSGYFPQEILTNLTDIQVL 264
           RA+FLQYNSFSG  P EI +NLT++QVL
Sbjct: 115 RALFLQYNSFSGNLPPEI-SNLTNLQVL 141


>ref|XP_002510484.1| protein with unknown function [Ricinus communis]
           gi|223551185|gb|EEF52671.1| protein with unknown
           function [Ricinus communis]
          Length = 1135

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 47/88 (53%), Positives = 55/88 (62%)
 Frame = +1

Query: 1   DWRGISCYNTQVHELRLPRLQLSGPLTPQXXXXXXXXXXXXXXXXXXGTIPYSLSKCRRL 180
           DWRGI CY+ +V ELRLPRLQL G +TPQ                  G+IP SLS+C  L
Sbjct: 60  DWRGIVCYSNRVRELRLPRLQLGGSITPQLANLRQLRKLSLHSNNFNGSIPPSLSQCPLL 119

Query: 181 RAIFLQYNSFSGYFPQEILTNLTDIQVL 264
           RA++ QYNS SG  P  IL NLT+IQVL
Sbjct: 120 RAVYFQYNSLSGNLPSSIL-NLTNIQVL 146


>ref|XP_002306906.1| predicted protein [Populus trichocarpa] gi|222856355|gb|EEE93902.1|
           predicted protein [Populus trichocarpa]
          Length = 1127

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 47/88 (53%), Positives = 56/88 (63%)
 Frame = +1

Query: 1   DWRGISCYNTQVHELRLPRLQLSGPLTPQXXXXXXXXXXXXXXXXXXGTIPYSLSKCRRL 180
           DWRGI CYN +VHELRLPRL LSG L+ Q                  G+IP SLS+C  L
Sbjct: 61  DWRGIVCYNNRVHELRLPRLYLSGQLSDQLSNLRQLRKLSLHSNNFNGSIPPSLSQCSLL 120

Query: 181 RAIFLQYNSFSGYFPQEILTNLTDIQVL 264
           RA++LQYNS SG  P  I+ NLT++QVL
Sbjct: 121 RAVYLQYNSLSGNLPSTIV-NLTNLQVL 147


>emb|CBI19800.3| unnamed protein product [Vitis vinifera]
          Length = 898

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 47/88 (53%), Positives = 55/88 (62%)
 Frame = +1

Query: 1   DWRGISCYNTQVHELRLPRLQLSGPLTPQXXXXXXXXXXXXXXXXXXGTIPYSLSKCRRL 180
           DWRGI CYN +V ELRLPRLQL G LT Q                  G++P SLS+C  L
Sbjct: 61  DWRGILCYNGRVWELRLPRLQLGGRLTDQLSNLRQLRKLSLHSNAFNGSVPLSLSQCSLL 120

Query: 181 RAIFLQYNSFSGYFPQEILTNLTDIQVL 264
           RA++L YNSFSG  P   LTNLT++QVL
Sbjct: 121 RAVYLHYNSFSGGLP-PALTNLTNLQVL 147


>ref|XP_002280668.1| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase At4g36180 [Vitis vinifera]
          Length = 1127

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 47/88 (53%), Positives = 55/88 (62%)
 Frame = +1

Query: 1   DWRGISCYNTQVHELRLPRLQLSGPLTPQXXXXXXXXXXXXXXXXXXGTIPYSLSKCRRL 180
           DWRGI CYN +V ELRLPRLQL G LT Q                  G++P SLS+C  L
Sbjct: 61  DWRGILCYNGRVWELRLPRLQLGGRLTDQLSNLRQLRKLSLHSNAFNGSVPLSLSQCSLL 120

Query: 181 RAIFLQYNSFSGYFPQEILTNLTDIQVL 264
           RA++L YNSFSG  P   LTNLT++QVL
Sbjct: 121 RAVYLHYNSFSGGLP-PALTNLTNLQVL 147


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