BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00036201
         (316 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF79618.1|AC027665_19 F5M15.26 [Arabidopsis thaliana]             115   4e-24
emb|CAC33017.1| hypothetical protein [Antirrhinum hispanicum]         109   3e-22
gb|ABW81060.1| GagPol3 [Arabidopsis lyrata subsp. lyrata]             108   4e-22
gb|AAD22505.1| putative retroelement gag/pol polyprotein [Arabid...   105   4e-21
emb|CAN69143.1| hypothetical protein VITISV_027770 [Vitis vinifera]   104   9e-21

>gb|AAF79618.1|AC027665_19 F5M15.26 [Arabidopsis thaliana]
          Length = 1838

 Score =  115 bits (288), Expect = 4e-24
 Identities = 54/105 (51%), Positives = 79/105 (75%)
 Frame = +1

Query: 1    LRNTLDFEWTPECERAFQELKDYLGKAPMLSRPEQGEKLYLYLGVTEYAISSVLVRIVGK 180
            L+    F+W  + E AF++LKDYL   P+L +PE GE LYLY+ V+++A+SSVLVR    
Sbjct: 1083 LKRRAQFDWDKDSEEAFEKLKDYLSTPPILVKPEVGETLYLYIAVSDHAVSSVLVREDRG 1142

Query: 181  LEKPVYFQSKTLLEAETRYSRIEKYALALVFSALKLKPYFEAHSV 315
             ++P+++ SK+L+EAETRY  IEK ALA+V SA KL+PYF++H++
Sbjct: 1143 EQRPIFYTSKSLVEAETRYPVIEKAALAVVTSARKLRPYFQSHTI 1187


>emb|CAC33017.1| hypothetical protein [Antirrhinum hispanicum]
          Length = 1455

 Score =  109 bits (272), Expect = 3e-22
 Identities = 51/105 (48%), Positives = 74/105 (70%)
 Frame = +1

Query: 1    LRNTLDFEWTPECERAFQELKDYLGKAPMLSRPEQGEKLYLYLGVTEYAISSVLVRIVGK 180
            L N  +F+W+ EC++AF +LK YL   P L +P+QGE+LY+YL V +  +S+VL R  G+
Sbjct: 932  LHNVKNFQWSDECQKAFDDLKGYLLCPPPLVKPQQGERLYVYLAVRKEVVSAVLARAEGR 991

Query: 181  LEKPVYFQSKTLLEAETRYSRIEKYALALVFSALKLKPYFEAHSV 315
               P+Y+ S+TL +A+TRYS IEK+A ALV +A KL+ YF  H +
Sbjct: 992  DHLPIYYTSRTLKDAKTRYSLIEKFAFALVTTAQKLRSYFLTHPI 1036


>gb|ABW81060.1| GagPol3 [Arabidopsis lyrata subsp. lyrata]
          Length = 1103

 Score =  108 bits (271), Expect = 4e-22
 Identities = 53/105 (50%), Positives = 74/105 (70%)
 Frame = +1

Query: 1   LRNTLDFEWTPECERAFQELKDYLGKAPMLSRPEQGEKLYLYLGVTEYAISSVLVRIVGK 180
           L+    F W  +CE AF +LK YL   P+LS+PE  EKLYLY+ V+ +A+S VLVR    
Sbjct: 280 LKGNKGFLWDEKCEEAFGQLKAYLTTPPILSKPEVDEKLYLYVSVSNHAVSGVLVREDRG 339

Query: 181 LEKPVYFQSKTLLEAETRYSRIEKYALALVFSALKLKPYFEAHSV 315
            +KP+Y+ SK++ + ETRY+ +EK ALA+V SA KL+PYF++H V
Sbjct: 340 EQKPIYYVSKSMTDPETRYTMMEKLALAVVTSARKLRPYFQSHPV 384


>gb|AAD22505.1| putative retroelement gag/pol polyprotein [Arabidopsis thaliana]
          Length = 1212

 Score =  105 bits (262), Expect = 4e-21
 Identities = 48/99 (48%), Positives = 72/99 (72%)
 Frame = +1

Query: 19  FEWTPECERAFQELKDYLGKAPMLSRPEQGEKLYLYLGVTEYAISSVLVRIVGKLEKPVY 198
           F W   CE AF++LK YL +  +L++PE GE+L+LY+ V+E AIS VLVR+    E+P++
Sbjct: 586 FVWDERCEEAFRQLKSYLSEPLVLAKPEFGERLFLYISVSENAISGVLVRVERSDERPIF 645

Query: 199 FQSKTLLEAETRYSRIEKYALALVFSALKLKPYFEAHSV 315
           + SK+  + ETRY  +EK ALA+V +A KL+PYF++H +
Sbjct: 646 YVSKSFSDVETRYPMMEKLALAVVTAARKLRPYFQSHPI 684


>emb|CAN69143.1| hypothetical protein VITISV_027770 [Vitis vinifera]
          Length = 622

 Score =  104 bits (259), Expect = 9e-21
 Identities = 51/94 (54%), Positives = 71/94 (75%), Gaps = 1/94 (1%)
 Frame = +1

Query: 37  CERAFQELKDYLGKAPMLSRPEQGEKLYLYLGVTEYAISSVLVRIVGKLE-KPVYFQSKT 213
           C+ AF+E+K YL + P+LS P+ GE+LYLYL V ++A+S VL+R +   E +PVYF SK 
Sbjct: 144 CQNAFEEIKRYLSQPPILSSPQPGERLYLYLAVIDWAVSVVLLRSLSPREQRPVYFISKA 203

Query: 214 LLEAETRYSRIEKYALALVFSALKLKPYFEAHSV 315
           L + ETRYSR+E+ ALAL  +A KL+PYF+AH +
Sbjct: 204 LADTETRYSRMEQTALALRTAAQKLRPYFQAHPI 237