BLASTX nr result

ID: Coptis24_contig00036199 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00036199
         (356 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524008.1| AMP dependent ligase, putative [Ricinus comm...   179   3e-43
ref|XP_002265371.1| PREDICTED: acyl-CoA synthetase family member...   174   5e-42
ref|XP_003627657.1| Acetyl-coenzyme A synthetase [Medicago trunc...   171   6e-41
ref|XP_002325887.1| predicted protein [Populus trichocarpa] gi|2...   169   3e-40
ref|XP_003521941.1| PREDICTED: acyl-CoA synthetase family member...   168   5e-40

>ref|XP_002524008.1| AMP dependent ligase, putative [Ricinus communis]
            gi|223536735|gb|EEF38376.1| AMP dependent ligase,
            putative [Ricinus communis]
          Length = 1144

 Score =  179 bits (453), Expect = 3e-43
 Identities = 84/116 (72%), Positives = 95/116 (81%), Gaps = 1/116 (0%)
 Frame = -1

Query: 350  QACWSAQYPRNRK-GSLHELWKVHSKSCIDASPLVVSKDSDIYLFIGSHSQIFLCIDAAS 174
            Q  WS + PRN K  SL ELWK+H  SC+DASPLVV KD D++LFIGSH+Q F+CIDA S
Sbjct: 761  QLSWSVEVPRNGKCSSLQELWKIHMVSCVDASPLVVFKDQDVFLFIGSHAQKFICIDAKS 820

Query: 173  GLVQWEVKLEGRIECSAAIVDDFSQVVVGCYKGKIYFLDFMTGNISWAFNTLGEVK 6
            G VQWEVKL+GRIECSAAIV D+SQVVVGCY+GKIYFLDF+ GNI W F T GEVK
Sbjct: 821  GSVQWEVKLQGRIECSAAIVADYSQVVVGCYEGKIYFLDFVNGNICWTFQTCGEVK 876


>ref|XP_002265371.1| PREDICTED: acyl-CoA synthetase family member 4 [Vitis vinifera]
            gi|296088768|emb|CBI38218.3| unnamed protein product
            [Vitis vinifera]
          Length = 1175

 Score =  174 bits (442), Expect = 5e-42
 Identities = 77/118 (65%), Positives = 93/118 (78%)
 Frame = -1

Query: 356  VCQACWSAQYPRNRKGSLHELWKVHSKSCIDASPLVVSKDSDIYLFIGSHSQIFLCIDAA 177
            +C   WS ++PRN+ G + ELWKVH +SC+DAS +VV KD DIYL IGSHS  F+C++A 
Sbjct: 797  ICHTTWSIEFPRNKSGFMRELWKVHMESCVDASAIVVFKDWDIYLLIGSHSHKFVCVNAK 856

Query: 176  SGLVQWEVKLEGRIECSAAIVDDFSQVVVGCYKGKIYFLDFMTGNISWAFNTLGEVKS 3
            SG ++W ++LEGRIECSAAI+DDFSQVVVGCY G IYFLDF  GNI W F T GEVKS
Sbjct: 857  SGFIRWGIELEGRIECSAAILDDFSQVVVGCYSGIIYFLDFSNGNICWTFQTRGEVKS 914


>ref|XP_003627657.1| Acetyl-coenzyme A synthetase [Medicago truncatula]
            gi|355521679|gb|AET02133.1| Acetyl-coenzyme A synthetase
            [Medicago truncatula]
          Length = 1224

 Score =  171 bits (433), Expect = 6e-41
 Identities = 78/116 (67%), Positives = 91/116 (78%)
 Frame = -1

Query: 350  QACWSAQYPRNRKGSLHELWKVHSKSCIDASPLVVSKDSDIYLFIGSHSQIFLCIDAASG 171
            Q  WS+  PR  +G +   WKV+ +SC+DASP+VVSK SD+YLFIGSHS  FLCI+  SG
Sbjct: 840  QTTWSSNVPRGSRGHMKSFWKVYMESCVDASPMVVSKGSDLYLFIGSHSHKFLCINVRSG 899

Query: 170  LVQWEVKLEGRIECSAAIVDDFSQVVVGCYKGKIYFLDFMTGNISWAFNTLGEVKS 3
             +QWE+KLEGRIEC+AAIV DFSQVVVGCY GKIYFLDF  G+I W F T GEVKS
Sbjct: 900  SMQWEIKLEGRIECTAAIVSDFSQVVVGCYMGKIYFLDFWNGHICWIFQTSGEVKS 955


>ref|XP_002325887.1| predicted protein [Populus trichocarpa] gi|222862762|gb|EEF00269.1|
            predicted protein [Populus trichocarpa]
          Length = 1058

 Score =  169 bits (427), Expect = 3e-40
 Identities = 80/111 (72%), Positives = 92/111 (82%), Gaps = 1/111 (0%)
 Frame = -1

Query: 335  AQYPRNRKGS-LHELWKVHSKSCIDASPLVVSKDSDIYLFIGSHSQIFLCIDAASGLVQW 159
            A+ PRN KGS +HELWKV+ +SC+DASPLVV K  D+YLFIGSHS  F+C++A SG +QW
Sbjct: 676  AKVPRNGKGSSMHELWKVYMESCVDASPLVVVKQQDVYLFIGSHSHKFVCVNALSGSIQW 735

Query: 158  EVKLEGRIECSAAIVDDFSQVVVGCYKGKIYFLDFMTGNISWAFNTLGEVK 6
            EVKLEGRIE SAAIV DFSQVVVGCY GKIYFLDF+ G+I W F T GEVK
Sbjct: 736  EVKLEGRIESSAAIVGDFSQVVVGCYSGKIYFLDFLDGSICWTFQTCGEVK 786


>ref|XP_003521941.1| PREDICTED: acyl-CoA synthetase family member 4-like [Glycine max]
          Length = 1153

 Score =  168 bits (425), Expect = 5e-40
 Identities = 76/116 (65%), Positives = 92/116 (79%)
 Frame = -1

Query: 350  QACWSAQYPRNRKGSLHELWKVHSKSCIDASPLVVSKDSDIYLFIGSHSQIFLCIDAASG 171
            Q  WSA  PR  +G ++  WKV+ +SC+DASP++V K +DIYLFIGSHS  FLCI+A SG
Sbjct: 773  QTTWSANVPRGSRGHMNNFWKVYMESCVDASPILVFKGTDIYLFIGSHSHKFLCINARSG 832

Query: 170  LVQWEVKLEGRIECSAAIVDDFSQVVVGCYKGKIYFLDFMTGNISWAFNTLGEVKS 3
             VQWE+KL+GRIEC+AAIV DFSQVVVGCY GKI+FLDF+ G I W F T GEVK+
Sbjct: 833  SVQWEIKLKGRIECTAAIVSDFSQVVVGCYMGKIHFLDFLNGRICWIFQTSGEVKA 888


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