BLASTX nr result

ID: Coptis24_contig00036180 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00036180
         (402 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_199569.1| uncharacterized protein [Arabidopsis thaliana] ...    92   6e-17
ref|XP_003550904.1| PREDICTED: uncharacterized protein LOC100794...    92   6e-17
ref|XP_002863334.1| hypothetical protein ARALYDRAFT_494215 [Arab...    92   6e-17
emb|CAN71255.1| hypothetical protein VITISV_043222 [Vitis vinifera]    92   6e-17
ref|XP_002303507.1| predicted protein [Populus trichocarpa] gi|2...    91   8e-17

>ref|NP_199569.1| uncharacterized protein [Arabidopsis thaliana]
           gi|9758786|dbj|BAB09084.1| unnamed protein product
           [Arabidopsis thaliana] gi|16974605|gb|AAL31205.1|
           AT5g47580/MNJ7_17 [Arabidopsis thaliana]
           gi|23506171|gb|AAN31097.1| At5g47580/MNJ7_17
           [Arabidopsis thaliana] gi|332008151|gb|AED95534.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 748

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 46/125 (36%), Positives = 68/125 (54%)
 Frame = -3

Query: 400 GFRYRKRWLPCRXXXXXXXXXXXXSIAAKIPVDLTTPMPSAWDQISKLSGSTFICISMGF 221
           GFR+RK W PC+            ++  K+ VDL T MPS  DQ++KLS + F+C  MG 
Sbjct: 46  GFRHRKFWFPCKFFSLNATSLTFIAVGIKLSVDLNTSMPSRQDQLAKLSSTVFVCTVMGN 105

Query: 220 LMPSLGTNQISECLTNMAALSLFXXXXXXXXXXXISTGVIFMFIVEHIMIMCCMLVLLAV 41
            MPSLG    ++ L N+ AL +            + TG I++F  EH +++  ML++L +
Sbjct: 106 SMPSLGIMDNNDLLMNLMALGILVITDVVNICIQLGTGAIYVFSEEHFLVVLLMLLMLMI 165

Query: 40  LWISA 26
           L  SA
Sbjct: 166 LCFSA 170


>ref|XP_003550904.1| PREDICTED: uncharacterized protein LOC100794740 [Glycine max]
          Length = 760

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 49/132 (37%), Positives = 69/132 (52%)
 Frame = -3

Query: 400 GFRYRKRWLPCRXXXXXXXXXXXXSIAAKIPVDLTTPMPSAWDQISKLSGSTFICISMGF 221
           G R RK W PC+            ++A K+ VDL TPMP   DQ+SKLS S  IC  M  
Sbjct: 46  GIRGRKLWFPCKFFCLNATSLAIIAVAVKLSVDLNTPMPHRHDQLSKLSSSALICTIMAN 105

Query: 220 LMPSLGTNQISECLTNMAALSLFXXXXXXXXXXXISTGVIFMFIVEHIMIMCCMLVLLAV 41
            MP+LG  +  + + N  A+++              TGVI++F VEH +IM  ML+LL  
Sbjct: 106 SMPTLGITENKDTMMNFMAMAILVITMIVNICIQFVTGVIYLFWVEHAVIMLIMLILLMT 165

Query: 40  LWISALFINRHK 5
           +  SA+ + + K
Sbjct: 166 MASSAISLPKMK 177


>ref|XP_002863334.1| hypothetical protein ARALYDRAFT_494215 [Arabidopsis lyrata subsp.
           lyrata] gi|297309169|gb|EFH39593.1| hypothetical protein
           ARALYDRAFT_494215 [Arabidopsis lyrata subsp. lyrata]
          Length = 748

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 46/125 (36%), Positives = 68/125 (54%)
 Frame = -3

Query: 400 GFRYRKRWLPCRXXXXXXXXXXXXSIAAKIPVDLTTPMPSAWDQISKLSGSTFICISMGF 221
           GFR+RK W PC+            ++  K+ VDL T MPS  DQ++KLS + F+C  MG 
Sbjct: 46  GFRHRKFWFPCKFFSLNATSLTFIAVGIKLSVDLNTSMPSRQDQLAKLSSTVFVCTVMGN 105

Query: 220 LMPSLGTNQISECLTNMAALSLFXXXXXXXXXXXISTGVIFMFIVEHIMIMCCMLVLLAV 41
            MPSLG    ++ L N+ AL +            + TG I++F  EH +++  ML++L +
Sbjct: 106 SMPSLGIMDNNDLLMNLMALGILVITDVVNICIQLGTGAIYVFSEEHFLVVLLMLLMLMI 165

Query: 40  LWISA 26
           L  SA
Sbjct: 166 LCFSA 170


>emb|CAN71255.1| hypothetical protein VITISV_043222 [Vitis vinifera]
          Length = 287

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 48/127 (37%), Positives = 68/127 (53%)
 Frame = -3

Query: 397 FRYRKRWLPCRXXXXXXXXXXXXSIAAKIPVDLTTPMPSAWDQISKLSGSTFICISMGFL 218
           FR+ K W PC+            ++A  + VDL T MP   DQ+SKLS +  +C  MG  
Sbjct: 79  FRHTKFWFPCKVFSLNVTSLTIIAVATNLSVDLNTSMPRCQDQLSKLSSTVLMCTVMGNF 138

Query: 217 MPSLGTNQISECLTNMAALSLFXXXXXXXXXXXISTGVIFMFIVEHIMIMCCMLVLLAVL 38
           MPS+GT +  E  +N+ AL +            + TGVI++F  EH ++M  MLVLL +L
Sbjct: 139 MPSIGTTENKEVFSNVIALDILMITLMVNVCIKMGTGVIYVFWKEHAVLMFIMLVLLLIL 198

Query: 37  WISALFI 17
             SAL +
Sbjct: 199 SFSALTV 205


>ref|XP_002303507.1| predicted protein [Populus trichocarpa] gi|222840939|gb|EEE78486.1|
           predicted protein [Populus trichocarpa]
          Length = 753

 Score = 91.3 bits (225), Expect = 8e-17
 Identities = 50/128 (39%), Positives = 67/128 (52%)
 Frame = -3

Query: 400 GFRYRKRWLPCRXXXXXXXXXXXXSIAAKIPVDLTTPMPSAWDQISKLSGSTFICISMGF 221
           GFR RK W P +            ++A K+ VDL T MP   DQ++KLS    +C  MG 
Sbjct: 46  GFRRRKFWFPSKYFSINATSLTIIAVAVKLSVDLNTAMPRRVDQLAKLSSGALLCTVMGN 105

Query: 220 LMPSLGTNQISECLTNMAALSLFXXXXXXXXXXXISTGVIFMFIVEHIMIMCCMLVLLAV 41
            MPSLG    S+  TNM AL +            + TGVI+++  EH+ IM  ML+LL +
Sbjct: 106 SMPSLGAMDNSDLCTNMIALGILVITVIVNIGIQLGTGVIYLYWKEHVFIMFLMLILLLI 165

Query: 40  LWISALFI 17
           L  SAL +
Sbjct: 166 LSFSALTV 173


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