BLASTX nr result
ID: Coptis24_contig00036170
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00036170 (253 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002529079.1| ATP-binding cassette transporter, putative [... 125 4e-27 ref|XP_004164072.1| PREDICTED: ABC transporter G family member 3... 123 2e-26 ref|XP_004143306.1| PREDICTED: ABC transporter G family member 3... 122 2e-26 ref|XP_002311035.1| predicted protein [Populus trichocarpa] gi|2... 121 7e-26 emb|CAN80610.1| hypothetical protein VITISV_042903 [Vitis vinifera] 120 2e-25 >ref|XP_002529079.1| ATP-binding cassette transporter, putative [Ricinus communis] gi|223531491|gb|EEF33323.1| ATP-binding cassette transporter, putative [Ricinus communis] Length = 1446 Score = 125 bits (314), Expect = 4e-27 Identities = 64/92 (69%), Positives = 70/92 (76%), Gaps = 9/92 (9%) Frame = -2 Query: 249 DTPDLSVSRVNVGEELQG---------RGMVLPFQPLALAFNHVNYYVDMPAEMKIQGIE 97 D PD R N G + +GMVLPFQPLALAFNHVNYYVDMPAEMK QG+E Sbjct: 807 DEPDSIARRQNAGGSISSNSGITNQSKKGMVLPFQPLALAFNHVNYYVDMPAEMKSQGVE 866 Query: 96 DSRLQLLQDVSGVFRPGVLTALVGVSGAGKTT 1 +SRLQLL+DVSG FRPG+LTALVGVSGAGKTT Sbjct: 867 ESRLQLLRDVSGAFRPGILTALVGVSGAGKTT 898 >ref|XP_004164072.1| PREDICTED: ABC transporter G family member 39-like [Cucumis sativus] Length = 1455 Score = 123 bits (308), Expect = 2e-26 Identities = 61/81 (75%), Positives = 67/81 (82%) Frame = -2 Query: 243 PDLSVSRVNVGEELQGRGMVLPFQPLALAFNHVNYYVDMPAEMKIQGIEDSRLQLLQDVS 64 P S + N + +GMVLPFQPL+LAFNHVNYYVDMPAEMK QGI+D RLQLL+DVS Sbjct: 827 PIKSSNAANNSNSTEKKGMVLPFQPLSLAFNHVNYYVDMPAEMKSQGIDDDRLQLLRDVS 886 Query: 63 GVFRPGVLTALVGVSGAGKTT 1 G FRPGVLTALVGVSGAGKTT Sbjct: 887 GAFRPGVLTALVGVSGAGKTT 907 >ref|XP_004143306.1| PREDICTED: ABC transporter G family member 39-like [Cucumis sativus] Length = 1455 Score = 122 bits (307), Expect = 2e-26 Identities = 61/81 (75%), Positives = 67/81 (82%) Frame = -2 Query: 243 PDLSVSRVNVGEELQGRGMVLPFQPLALAFNHVNYYVDMPAEMKIQGIEDSRLQLLQDVS 64 P S + N + +GMVLPFQPL+LAFNHVNYYVDMPAEMK QGI+D RLQLL+DVS Sbjct: 827 PIKSSNAANNSNSTKKKGMVLPFQPLSLAFNHVNYYVDMPAEMKSQGIDDDRLQLLRDVS 886 Query: 63 GVFRPGVLTALVGVSGAGKTT 1 G FRPGVLTALVGVSGAGKTT Sbjct: 887 GAFRPGVLTALVGVSGAGKTT 907 >ref|XP_002311035.1| predicted protein [Populus trichocarpa] gi|222850855|gb|EEE88402.1| predicted protein [Populus trichocarpa] Length = 1390 Score = 121 bits (303), Expect = 7e-26 Identities = 58/65 (89%), Positives = 63/65 (96%) Frame = -2 Query: 195 RGMVLPFQPLALAFNHVNYYVDMPAEMKIQGIEDSRLQLLQDVSGVFRPGVLTALVGVSG 16 RGMVLPFQPL+LAFNHVNYYVDMPAEMK+QGI++ RLQLL+DVSG FRPGVLTALVGVSG Sbjct: 784 RGMVLPFQPLSLAFNHVNYYVDMPAEMKMQGIKEDRLQLLRDVSGAFRPGVLTALVGVSG 843 Query: 15 AGKTT 1 AGKTT Sbjct: 844 AGKTT 848 >emb|CAN80610.1| hypothetical protein VITISV_042903 [Vitis vinifera] Length = 1357 Score = 120 bits (300), Expect = 2e-25 Identities = 58/78 (74%), Positives = 64/78 (82%) Frame = -2 Query: 234 SVSRVNVGEELQGRGMVLPFQPLALAFNHVNYYVDMPAEMKIQGIEDSRLQLLQDVSGVF 55 S S + +GMVLPFQPL LAFNHVNYYVDMPAEMK QG+E+ RLQLL+DVSG F Sbjct: 732 SSSXIGAANNESRKGMVLPFQPLPLAFNHVNYYVDMPAEMKSQGVEEDRLQLLRDVSGAF 791 Query: 54 RPGVLTALVGVSGAGKTT 1 RPG+LTALVGVSGAGKTT Sbjct: 792 RPGILTALVGVSGAGKTT 809