BLASTX nr result

ID: Coptis24_contig00036167 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00036167
         (520 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002324339.1| predicted protein [Populus trichocarpa] gi|2...   267   6e-70
ref|XP_002308712.1| predicted protein [Populus trichocarpa] gi|2...   259   2e-67
ref|XP_002283360.2| PREDICTED: uncharacterized protein LOC100244...   251   6e-65
emb|CAN79215.1| hypothetical protein VITISV_025941 [Vitis vinifera]   251   6e-65
ref|XP_003545404.1| PREDICTED: uncharacterized protein LOC100806...   241   5e-62

>ref|XP_002324339.1| predicted protein [Populus trichocarpa] gi|222865773|gb|EEF02904.1|
           predicted protein [Populus trichocarpa]
          Length = 519

 Score =  267 bits (683), Expect = 6e-70
 Identities = 125/174 (71%), Positives = 152/174 (87%), Gaps = 1/174 (0%)
 Frame = +1

Query: 1   KILKDYPFRNLLFFAQLLYATSGMLDLMFILRWNLKIGIPDYFFVVMEECISRIVSRIRW 180
           K LKDYPFR+LL +AQLLY  +GMLD++F LRWNL IGIPDYFFV+MEEC+SRI+SRIRW
Sbjct: 331 KTLKDYPFRSLLLYAQLLYGMTGMLDVIFFLRWNLVIGIPDYFFVIMEECVSRIISRIRW 390

Query: 181 MPMIVLSTKLCPLGIEGTFFALLMCIDSLGSLSNKWAGGIVLHLLNVTRTDFTNLWLVIL 360
           +PMIVLST+LCPLGIEGTFFALLMCIDSLGSLS+KW GGIVLHL +VTRTDFTNLWL IL
Sbjct: 391 IPMIVLSTRLCPLGIEGTFFALLMCIDSLGSLSSKWGGGIVLHLFHVTRTDFTNLWLAIL 450

Query: 361 IRNLLRFSTLSLIFLIPKGDQSNVLVPPDLLSQGSTLNM-EEGLQLVSVNKKTQ 519
           IRN LRF+T+ LIFL+PKGDQ + L+PPD+L+  S  ++ ++GL+L  V + ++
Sbjct: 451 IRNFLRFATIGLIFLVPKGDQEDDLIPPDILTANSDASLDDDGLELAPVKETSE 504


>ref|XP_002308712.1| predicted protein [Populus trichocarpa] gi|222854688|gb|EEE92235.1|
           predicted protein [Populus trichocarpa]
          Length = 479

 Score =  259 bits (662), Expect = 2e-67
 Identities = 120/174 (68%), Positives = 152/174 (87%), Gaps = 1/174 (0%)
 Frame = +1

Query: 1   KILKDYPFRNLLFFAQLLYATSGMLDLMFILRWNLKIGIPDYFFVVMEECISRIVSRIRW 180
           K LK+ PFR+L+ +AQLLY  SGMLDL F+LRWNL +GIPDYFFV+ EEC++RI+SRIRW
Sbjct: 297 KALKNCPFRSLILYAQLLYGMSGMLDLTFVLRWNLALGIPDYFFVIAEECVTRIISRIRW 356

Query: 181 MPMIVLSTKLCPLGIEGTFFALLMCIDSLGSLSNKWAGGIVLHLLNVTRTDFTNLWLVIL 360
           MPMIVLST+LCPLGIEGTFFALLMCIDSLG+LS+KW GG++LHL +VTRTDFTNLWLVIL
Sbjct: 357 MPMIVLSTRLCPLGIEGTFFALLMCIDSLGALSSKWGGGVLLHLFHVTRTDFTNLWLVIL 416

Query: 361 IRNLLRFSTLSLIFLIPKGDQSNVLVPPDLLSQGSTLNM-EEGLQLVSVNKKTQ 519
           IRN LRF+TL LIFL+P+GDQ++ L+P D+L+  S  ++ ++GL+LV V + ++
Sbjct: 417 IRNFLRFATLGLIFLVPRGDQADSLIPSDVLTANSAASLDDDGLELVPVKETSE 470


>ref|XP_002283360.2| PREDICTED: uncharacterized protein LOC100244119 [Vitis vinifera]
           gi|296082148|emb|CBI21153.3| unnamed protein product
           [Vitis vinifera]
          Length = 518

 Score =  251 bits (640), Expect = 6e-65
 Identities = 117/161 (72%), Positives = 143/161 (88%)
 Frame = +1

Query: 1   KILKDYPFRNLLFFAQLLYATSGMLDLMFILRWNLKIGIPDYFFVVMEECISRIVSRIRW 180
           K LKD PFR LLFFAQL+YA SG+LD++FILRWNL +G+PDY FVVMEECISR+V+R+RW
Sbjct: 345 KTLKDCPFRTLLFFAQLIYAISGILDVIFILRWNLALGVPDYLFVVMEECISRVVARVRW 404

Query: 181 MPMIVLSTKLCPLGIEGTFFALLMCIDSLGSLSNKWAGGIVLHLLNVTRTDFTNLWLVIL 360
           MPMI+LSTKLCPLGIEGTFFALLMCIDSLGSLS+KWAGG+VLHLL+VTR+DFTNLWLV+L
Sbjct: 405 MPMIILSTKLCPLGIEGTFFALLMCIDSLGSLSSKWAGGMVLHLLHVTRSDFTNLWLVVL 464

Query: 361 IRNLLRFSTLSLIFLIPKGDQSNVLVPPDLLSQGSTLNMEE 483
           IRN+LR +TL LIFL+P   QS+ ++  D L+  S+++ E+
Sbjct: 465 IRNILRLATLGLIFLVPNVGQSDEVISSDFLNDTSSVSEED 505


>emb|CAN79215.1| hypothetical protein VITISV_025941 [Vitis vinifera]
          Length = 242

 Score =  251 bits (640), Expect = 6e-65
 Identities = 117/161 (72%), Positives = 143/161 (88%)
 Frame = +1

Query: 1   KILKDYPFRNLLFFAQLLYATSGMLDLMFILRWNLKIGIPDYFFVVMEECISRIVSRIRW 180
           K LKD PFR LLFFAQL+YA SG+LD++FILRWNL +G+PDY FVVMEECISR+V+R+RW
Sbjct: 69  KTLKDCPFRTLLFFAQLIYAISGILDVIFILRWNLALGVPDYLFVVMEECISRVVARVRW 128

Query: 181 MPMIVLSTKLCPLGIEGTFFALLMCIDSLGSLSNKWAGGIVLHLLNVTRTDFTNLWLVIL 360
           MPMI+LSTKLCPLGIEGTFFALLMCIDSLGSLS+KWAGG+VLHLL+VTR+DFTNLWLV+L
Sbjct: 129 MPMIILSTKLCPLGIEGTFFALLMCIDSLGSLSSKWAGGMVLHLLHVTRSDFTNLWLVVL 188

Query: 361 IRNLLRFSTLSLIFLIPKGDQSNVLVPPDLLSQGSTLNMEE 483
           IRN+LR +TL LIFL+P   QS+ ++  D L+  S+++ E+
Sbjct: 189 IRNILRLATLGLIFLVPNVGQSDEVISSDFLNDTSSVSEED 229


>ref|XP_003545404.1| PREDICTED: uncharacterized protein LOC100806186 [Glycine max]
          Length = 523

 Score =  241 bits (615), Expect = 5e-62
 Identities = 113/175 (64%), Positives = 150/175 (85%), Gaps = 2/175 (1%)
 Frame = +1

Query: 1   KILKDYPFRNLLFFAQLLYATSGMLDLMFILRWNLKIGIPDYFFVVMEECISRIVSRIRW 180
           K LKDYPFR+L+F+AQLLY  SG+LDL+FILRWNL IGIPDYFFVV+EE  +RI S+IRW
Sbjct: 348 KALKDYPFRDLVFYAQLLYGISGVLDLIFILRWNLVIGIPDYFFVVIEESATRITSKIRW 407

Query: 181 MPMIVLSTKLCPLGIEGTFFALLMCIDSLGSLSNKWAGGIVLHLLNVTRTDFTNLWLVIL 360
           MPM+VLST+LCPLGIEGTFFALLMCIDS+G+L ++W GG++L +L++TRTDFTNLWL +L
Sbjct: 408 MPMMVLSTQLCPLGIEGTFFALLMCIDSIGALLSRWGGGVLLRVLHITRTDFTNLWLAVL 467

Query: 361 IRNLLRFSTLSLIFLIPKGDQSNVLVPPDLLSQGST--LNMEEGLQLVSVNKKTQ 519
           IR++LRF+TL+L+FL+PK DQ   L+P ++  + ++  ++ EE L+LV +N KT+
Sbjct: 468 IRDMLRFATLALVFLVPKTDQYEELLPFEVSGKNTSDKVDEEETLELVPINGKTE 522


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