BLASTX nr result

ID: Coptis24_contig00036165 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00036165
         (264 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI25448.3| unnamed protein product [Vitis vinifera]              148   4e-34
ref|XP_002272996.1| PREDICTED: U-box domain-containing protein 1...   148   4e-34
emb|CAN60363.1| hypothetical protein VITISV_024685 [Vitis vinifera]   148   4e-34
ref|XP_002311243.1| predicted protein [Populus trichocarpa] gi|2...   146   2e-33
ref|XP_002316197.1| predicted protein [Populus trichocarpa] gi|2...   144   6e-33

>emb|CBI25448.3| unnamed protein product [Vitis vinifera]
          Length = 518

 Score =  148 bits (374), Expect = 4e-34
 Identities = 72/87 (82%), Positives = 84/87 (96%)
 Frame = -3

Query: 262 PLLIELLMDDKAGITDDALAVLALLSGCIEGLEEIRENRVVVPLLIDLLRFGSPKGRENS 83
           PLLIELLMDDKAGITDDALAVLALL GC +GLEEIR++R++VPLLIDLLRFGSPKG+ENS
Sbjct: 396 PLLIELLMDDKAGITDDALAVLALLLGCPDGLEEIRKSRILVPLLIDLLRFGSPKGKENS 455

Query: 82  VTLLLGLCRNGGEELARRLLIHPHSIP 2
           +TLLLGLC++GGEE+ARRLL++P SIP
Sbjct: 456 ITLLLGLCKDGGEEVARRLLLNPRSIP 482


>ref|XP_002272996.1| PREDICTED: U-box domain-containing protein 13 [Vitis vinifera]
          Length = 688

 Score =  148 bits (374), Expect = 4e-34
 Identities = 72/87 (82%), Positives = 84/87 (96%)
 Frame = -3

Query: 262 PLLIELLMDDKAGITDDALAVLALLSGCIEGLEEIRENRVVVPLLIDLLRFGSPKGRENS 83
           PLLIELLMDDKAGITDDALAVLALL GC +GLEEIR++R++VPLLIDLLRFGSPKG+ENS
Sbjct: 566 PLLIELLMDDKAGITDDALAVLALLLGCPDGLEEIRKSRILVPLLIDLLRFGSPKGKENS 625

Query: 82  VTLLLGLCRNGGEELARRLLIHPHSIP 2
           +TLLLGLC++GGEE+ARRLL++P SIP
Sbjct: 626 ITLLLGLCKDGGEEVARRLLLNPRSIP 652


>emb|CAN60363.1| hypothetical protein VITISV_024685 [Vitis vinifera]
          Length = 668

 Score =  148 bits (374), Expect = 4e-34
 Identities = 72/87 (82%), Positives = 84/87 (96%)
 Frame = -3

Query: 262 PLLIELLMDDKAGITDDALAVLALLSGCIEGLEEIRENRVVVPLLIDLLRFGSPKGRENS 83
           PLLIELLMDDKAGITDDALAVLALL GC +GLEEIR++R++VPLLIDLLRFGSPKG+ENS
Sbjct: 546 PLLIELLMDDKAGITDDALAVLALLLGCPDGLEEIRKSRILVPLLIDLLRFGSPKGKENS 605

Query: 82  VTLLLGLCRNGGEELARRLLIHPHSIP 2
           +TLLLGLC++GGEE+ARRLL++P SIP
Sbjct: 606 ITLLLGLCKDGGEEVARRLLLNPRSIP 632


>ref|XP_002311243.1| predicted protein [Populus trichocarpa] gi|222851063|gb|EEE88610.1|
           predicted protein [Populus trichocarpa]
          Length = 688

 Score =  146 bits (368), Expect = 2e-33
 Identities = 70/87 (80%), Positives = 84/87 (96%)
 Frame = -3

Query: 262 PLLIELLMDDKAGITDDALAVLALLSGCIEGLEEIRENRVVVPLLIDLLRFGSPKGRENS 83
           PLLIELLMDDKAGITDDALA+LALLSGC EGLEEIR++R+++P++IDLLRFGS KG+ENS
Sbjct: 566 PLLIELLMDDKAGITDDALALLALLSGCSEGLEEIRQSRILMPMVIDLLRFGSTKGKENS 625

Query: 82  VTLLLGLCRNGGEELARRLLIHPHSIP 2
           +TLLLGLC++GGEE+ARRLLI+P SIP
Sbjct: 626 ITLLLGLCKDGGEEVARRLLINPRSIP 652


>ref|XP_002316197.1| predicted protein [Populus trichocarpa] gi|222865237|gb|EEF02368.1|
           predicted protein [Populus trichocarpa]
          Length = 688

 Score =  144 bits (364), Expect = 6e-33
 Identities = 70/87 (80%), Positives = 83/87 (95%)
 Frame = -3

Query: 262 PLLIELLMDDKAGITDDALAVLALLSGCIEGLEEIRENRVVVPLLIDLLRFGSPKGRENS 83
           PLL+E+LMDDKAGITDDALA+LALL GC EGLEEIR+++V+VPLLIDLLRFGS KG+ENS
Sbjct: 566 PLLVEMLMDDKAGITDDALALLALLLGCSEGLEEIRKSKVLVPLLIDLLRFGSTKGKENS 625

Query: 82  VTLLLGLCRNGGEELARRLLIHPHSIP 2
           +TLLLGLC++GGEE+ARRLLI+P SIP
Sbjct: 626 ITLLLGLCKDGGEEVARRLLINPRSIP 652


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