BLASTX nr result

ID: Coptis24_contig00036162 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00036162
         (254 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282629.2| PREDICTED: probable L-type lectin-domain con...   126   2e-27
ref|XP_002324854.1| predicted protein [Populus trichocarpa] gi|2...   122   2e-26
ref|XP_002515529.1| conserved hypothetical protein [Ricinus comm...   104   9e-21
ref|XP_003635251.1| PREDICTED: L-type lectin-domain containing r...    97   2e-18
ref|XP_003631720.1| PREDICTED: L-type lectin-domain containing r...    96   4e-18

>ref|XP_002282629.2| PREDICTED: probable L-type lectin-domain containing receptor kinase
           S.7-like [Vitis vinifera]
          Length = 661

 Score =  126 bits (317), Expect = 2e-27
 Identities = 59/83 (71%), Positives = 71/83 (85%)
 Frame = +1

Query: 4   EYNACLGDFGLARFFESEAAVTTMLAGTPGYLAPECTYTGKATPESDAFSYGIVVLEVVC 183
           +YNA LGDFGLAR  +++A+VTTMLAGTPGYLAPE  +TGKATP+SD +S+G+VVLEVVC
Sbjct: 475 DYNAQLGDFGLARLLQNDASVTTMLAGTPGYLAPEVGFTGKATPDSDVYSFGMVVLEVVC 534

Query: 184 GRRSMGGIGQNNLVDYVWNLHGK 252
           GRRS G   + +LVDYVW LHGK
Sbjct: 535 GRRSRGITEETSLVDYVWILHGK 557


>ref|XP_002324854.1| predicted protein [Populus trichocarpa] gi|222866288|gb|EEF03419.1|
           predicted protein [Populus trichocarpa]
          Length = 282

 Score =  122 bits (307), Expect = 2e-26
 Identities = 56/83 (67%), Positives = 70/83 (84%)
 Frame = +1

Query: 4   EYNACLGDFGLARFFESEAAVTTMLAGTPGYLAPECTYTGKATPESDAFSYGIVVLEVVC 183
           ++NA LGDFGLAR   S++AVTTMLAGTPGYLAPE  YTGKA PESD +S+G+VV+EVV 
Sbjct: 153 DFNAHLGDFGLARLLRSDSAVTTMLAGTPGYLAPEVAYTGKAAPESDVYSFGMVVIEVVT 212

Query: 184 GRRSMGGIGQNNLVDYVWNLHGK 252
           G+RS G   +N+L+DYVW+LHG+
Sbjct: 213 GQRSRGIFEENSLLDYVWSLHGR 235


>ref|XP_002515529.1| conserved hypothetical protein [Ricinus communis]
           gi|223545473|gb|EEF46978.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 584

 Score =  104 bits (259), Expect = 9e-21
 Identities = 50/82 (60%), Positives = 64/82 (78%), Gaps = 1/82 (1%)
 Frame = +1

Query: 10  NACLGDFGLARFFESEAA-VTTMLAGTPGYLAPECTYTGKATPESDAFSYGIVVLEVVCG 186
           N  LGDFGLAR   + ++ VTTMLA TPGYLAPE  Y+GKATPESD +S+G++V+EVV G
Sbjct: 397 NGHLGDFGLARLLHNNSSSVTTMLADTPGYLAPEVGYSGKATPESDVYSFGMIVIEVVSG 456

Query: 187 RRSMGGIGQNNLVDYVWNLHGK 252
           RRS G   +N+L++Y W+LH K
Sbjct: 457 RRSKGVFEENSLLNYFWSLHEK 478


>ref|XP_003635251.1| PREDICTED: L-type lectin-domain containing receptor kinase IX.1-like
            [Vitis vinifera]
          Length = 957

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 48/86 (55%), Positives = 63/86 (73%), Gaps = 4/86 (4%)
 Frame = +1

Query: 7    YNACLGDFGLARFFESE-AAVTTMLAGTPGYLAPECTYTGKATPESDAFSYGIVVLEVVC 183
            +NA LGDFGLARF + E  + TT+LAGT GYLAPEC  TGKA+ ESD +S+G+V LE+ C
Sbjct: 751  FNAKLGDFGLARFVDHELGSQTTVLAGTMGYLAPECVTTGKASKESDVYSFGVVALEITC 810

Query: 184  GRRSM---GGIGQNNLVDYVWNLHGK 252
            GRR +       +  LV++VW+L+GK
Sbjct: 811  GRRPVEPRAEPSKTRLVEWVWSLYGK 836


>ref|XP_003631720.1| PREDICTED: L-type lectin-domain containing receptor kinase
           IX.1-like [Vitis vinifera]
          Length = 688

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 47/86 (54%), Positives = 65/86 (75%), Gaps = 4/86 (4%)
 Frame = +1

Query: 4   EYNACLGDFGLARFFE-SEAAVTTMLAGTPGYLAPECTYTGKATPESDAFSYGIVVLEVV 180
           ++NA LGDFGLARF +  + + TT+LAGT GY+APEC  T KA+ ESD +S+G+VVLE+ 
Sbjct: 507 DFNAKLGDFGLARFVDHGKGSQTTVLAGTMGYMAPECFMTSKASKESDVYSFGVVVLEIC 566

Query: 181 CGRRSMGGIGQNN---LVDYVWNLHG 249
           CGRRS+    + N   LV++VW+L+G
Sbjct: 567 CGRRSVEPKAKENQIRLVEWVWDLYG 592


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