BLASTX nr result

ID: Coptis24_contig00036143 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00036143
         (437 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002443435.1| hypothetical protein SORBIDRAFT_08g019436 [S...   147   2e-36
ref|XP_002443644.1| hypothetical protein SORBIDRAFT_08g022750 [S...   143   5e-35
ref|XP_002459817.1| hypothetical protein SORBIDRAFT_02g011180 [S...   145   5e-35
ref|XP_002468682.1| hypothetical protein SORBIDRAFT_01g050160 [S...   145   5e-35
ref|XP_002464683.1| hypothetical protein SORBIDRAFT_01g023250 [S...   145   5e-35

>ref|XP_002443435.1| hypothetical protein SORBIDRAFT_08g019436 [Sorghum bicolor]
           gi|241944128|gb|EES17273.1| hypothetical protein
           SORBIDRAFT_08g019436 [Sorghum bicolor]
          Length = 246

 Score =  147 bits (370), Expect(2) = 2e-36
 Identities = 68/102 (66%), Positives = 82/102 (80%), Gaps = 1/102 (0%)
 Frame = +3

Query: 87  MEPIVWWVSYGATTPLLQSLALKLVGQPCSSSCCERNWSTYSFINSLKRNKITPQRGKDL 266
           + P+ WW ++G   P+L SLA+KL+ QP SSSCCERNWSTYSFI+SLKRN +TP+R +DL
Sbjct: 110 ISPMTWWTNHGQAAPMLMSLAMKLLSQPASSSCCERNWSTYSFIHSLKRNALTPERAEDL 169

Query: 267 VFVHSNLRLLSRKSKEYK-GVTTMWGVGEDTFDSLEGVGILE 389
           VFVH+NLR LSRKS  YK G T MW VG D+FDSL G+GILE
Sbjct: 170 VFVHTNLRHLSRKSDAYKTGETRMWDVGGDSFDSLGGIGILE 211



 Score = 30.8 bits (68), Expect(2) = 2e-36
 Identities = 14/24 (58%), Positives = 18/24 (75%)
 Frame = +2

Query: 365 LGGSWHT*IADLSLDEPEMEAMLF 436
           LGG     +AD+SLDEPE++AM F
Sbjct: 204 LGGIGILEVADMSLDEPELQAMTF 227


>ref|XP_002443644.1| hypothetical protein SORBIDRAFT_08g022750 [Sorghum bicolor]
           gi|241944337|gb|EES17482.1| hypothetical protein
           SORBIDRAFT_08g022750 [Sorghum bicolor]
          Length = 684

 Score =  143 bits (360), Expect(2) = 5e-35
 Identities = 66/102 (64%), Positives = 82/102 (80%), Gaps = 1/102 (0%)
 Frame = +3

Query: 87  MEPIVWWVSYGATTPLLQSLALKLVGQPCSSSCCERNWSTYSFINSLKRNKITPQRGKDL 266
           + P+ WW ++G + P L SLA+KL+ QP SSSCCERNWSTYSF++S+KRN +TP+R +DL
Sbjct: 547 VSPMTWWTNHGQSAPQLMSLAMKLLSQPASSSCCERNWSTYSFVHSVKRNVLTPERAEDL 606

Query: 267 VFVHSNLRLLSRKSKEYK-GVTTMWGVGEDTFDSLEGVGILE 389
           VFVHSNLR LSR++  YK G T MW VG D+FDSL GVGILE
Sbjct: 607 VFVHSNLRHLSRRTDAYKTGETRMWDVGGDSFDSLGGVGILE 648



 Score = 29.6 bits (65), Expect(2) = 5e-35
 Identities = 14/24 (58%), Positives = 18/24 (75%)
 Frame = +2

Query: 365 LGGSWHT*IADLSLDEPEMEAMLF 436
           LGG     +ADLSLDEPE++A+ F
Sbjct: 641 LGGVGILEVADLSLDEPELQAVSF 664


>ref|XP_002459817.1| hypothetical protein SORBIDRAFT_02g011180 [Sorghum bicolor]
           gi|241923194|gb|EER96338.1| hypothetical protein
           SORBIDRAFT_02g011180 [Sorghum bicolor]
          Length = 647

 Score =  145 bits (367), Expect(2) = 5e-35
 Identities = 67/102 (65%), Positives = 82/102 (80%), Gaps = 1/102 (0%)
 Frame = +3

Query: 87  MEPIVWWVSYGATTPLLQSLALKLVGQPCSSSCCERNWSTYSFINSLKRNKITPQRGKDL 266
           + P+ WW ++G   PLL SLA+KL+ QP SSSCCERNWSTYSFI+S+ RN +TP+R +DL
Sbjct: 512 LSPMTWWTNHGQYAPLLMSLAMKLLSQPASSSCCERNWSTYSFIHSVSRNALTPERAEDL 571

Query: 267 VFVHSNLRLLSRKSKEYK-GVTTMWGVGEDTFDSLEGVGILE 389
           VFVH+NLRLLSR+S  YK G T MW VG D+FDSL G+GILE
Sbjct: 572 VFVHTNLRLLSRRSDAYKAGETRMWDVGGDSFDSLGGIGILE 613



 Score = 26.9 bits (58), Expect(2) = 5e-35
 Identities = 12/24 (50%), Positives = 18/24 (75%)
 Frame = +2

Query: 365 LGGSWHT*IADLSLDEPEMEAMLF 436
           LGG     +A+LS+DEPE++A+ F
Sbjct: 606 LGGIGILEVANLSVDEPELQAVTF 629


>ref|XP_002468682.1| hypothetical protein SORBIDRAFT_01g050160 [Sorghum bicolor]
           gi|241922536|gb|EER95680.1| hypothetical protein
           SORBIDRAFT_01g050160 [Sorghum bicolor]
          Length = 647

 Score =  145 bits (367), Expect(2) = 5e-35
 Identities = 67/102 (65%), Positives = 82/102 (80%), Gaps = 1/102 (0%)
 Frame = +3

Query: 87  MEPIVWWVSYGATTPLLQSLALKLVGQPCSSSCCERNWSTYSFINSLKRNKITPQRGKDL 266
           + P+ WW ++G   PLL SLA+KL+ QP SSSCCERNWSTYSFI+S+ RN +TP+R +DL
Sbjct: 512 LSPMTWWTNHGQYAPLLMSLAMKLLSQPASSSCCERNWSTYSFIHSVSRNALTPERAEDL 571

Query: 267 VFVHSNLRLLSRKSKEYK-GVTTMWGVGEDTFDSLEGVGILE 389
           VFVH+NLRLLSR+S  YK G T MW VG D+FDSL G+GILE
Sbjct: 572 VFVHTNLRLLSRRSDAYKAGETRMWDVGGDSFDSLGGIGILE 613



 Score = 26.9 bits (58), Expect(2) = 5e-35
 Identities = 12/24 (50%), Positives = 18/24 (75%)
 Frame = +2

Query: 365 LGGSWHT*IADLSLDEPEMEAMLF 436
           LGG     +A+LS+DEPE++A+ F
Sbjct: 606 LGGIGILEVANLSVDEPELQAVTF 629


>ref|XP_002464683.1| hypothetical protein SORBIDRAFT_01g023250 [Sorghum bicolor]
           gi|241918537|gb|EER91681.1| hypothetical protein
           SORBIDRAFT_01g023250 [Sorghum bicolor]
          Length = 647

 Score =  145 bits (367), Expect(2) = 5e-35
 Identities = 67/102 (65%), Positives = 82/102 (80%), Gaps = 1/102 (0%)
 Frame = +3

Query: 87  MEPIVWWVSYGATTPLLQSLALKLVGQPCSSSCCERNWSTYSFINSLKRNKITPQRGKDL 266
           + P+ WW ++G   PLL SLA+KL+ QP SSSCCERNWSTYSFI+S+ RN +TP+R +DL
Sbjct: 512 LSPMTWWTNHGQYAPLLMSLAMKLLSQPASSSCCERNWSTYSFIHSVSRNALTPERAEDL 571

Query: 267 VFVHSNLRLLSRKSKEYK-GVTTMWGVGEDTFDSLEGVGILE 389
           VFVH+NLRLLSR+S  YK G T MW VG D+FDSL G+GILE
Sbjct: 572 VFVHTNLRLLSRRSDAYKAGETRMWDVGGDSFDSLGGIGILE 613



 Score = 26.9 bits (58), Expect(2) = 5e-35
 Identities = 12/24 (50%), Positives = 18/24 (75%)
 Frame = +2

Query: 365 LGGSWHT*IADLSLDEPEMEAMLF 436
           LGG     +A+LS+DEPE++A+ F
Sbjct: 606 LGGIGILEVANLSVDEPELQAVTF 629


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