BLASTX nr result

ID: Coptis24_contig00036140 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00036140
         (404 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002882796.1| hypothetical protein ARALYDRAFT_318060 [Arab...    99   4e-19
gb|AFK64817.1| translation elongation factor 2 [Prunus persica]        99   5e-19
gb|AFK33772.1| unknown [Lotus japonicus]                               99   5e-19
ref|XP_002513404.1| eukaryotic translation elongation factor, pu...    98   6e-19
ref|XP_003596166.1| Elongation factor EF-2 [Medicago truncatula]...    98   8e-19

>ref|XP_002882796.1| hypothetical protein ARALYDRAFT_318060 [Arabidopsis lyrata subsp.
            lyrata] gi|297328636|gb|EFH59055.1| hypothetical protein
            ARALYDRAFT_318060 [Arabidopsis lyrata subsp. lyrata]
          Length = 832

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 59/132 (44%), Positives = 72/132 (54%)
 Frame = +3

Query: 9    YRGNNQIVFXXXXXXXXXXXXXXPWLLEPSYMVHIQASEEALGAIAILLGKKHGKIRESM 188
            +RG  Q++               P LLEP YMV IQA E ALG I  +L +K G + E M
Sbjct: 689  HRGGGQMISTARRAIYASQLTAKPRLLEPVYMVEIQAPEGALGGIYSVLNQKRGHVFEEM 748

Query: 189  LSQNCQTYSIRAVLPGREYYEFCGALSTATSGRAFLLQCAFYQWEPVKSDPLEVGSPAWG 368
                   Y+I+A LP  E + F G L  ATSG+AF  QC F  W+ + SDPLE GS A  
Sbjct: 749  QRPGTPLYNIKAYLPVVESFNFSGQLRAATSGQAF-PQCVFDHWDMMSSDPLEAGSQAAT 807

Query: 369  LVRAIRARQGLK 404
            LV  IR R+GLK
Sbjct: 808  LVADIRKRKGLK 819


>gb|AFK64817.1| translation elongation factor 2 [Prunus persica]
          Length = 843

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 58/132 (43%), Positives = 73/132 (55%)
 Frame = +3

Query: 9    YRGNNQIVFXXXXXXXXXXXXXXPWLLEPSYMVHIQASEEALGAIAILLGKKHGKIRESM 188
            +RG  Q++               P LLEP Y+V IQA E+ALG I  +L +K G + E M
Sbjct: 700  HRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEM 759

Query: 189  LSQNCQTYSIRAVLPGREYYEFCGALSTATSGRAFLLQCAFYQWEPVKSDPLEVGSPAWG 368
                   Y+I+A LP  E + F G L  +TSG+AF  QC F  WE + SDPLE GS A  
Sbjct: 760  QRPGTPLYNIKAYLPVIESFGFSGQLRASTSGQAF-PQCVFDHWEMMSSDPLEAGSQASQ 818

Query: 369  LVRAIRARQGLK 404
            LV  IR R+GLK
Sbjct: 819  LVTDIRKRKGLK 830


>gb|AFK33772.1| unknown [Lotus japonicus]
          Length = 194

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 59/132 (44%), Positives = 73/132 (55%)
 Frame = +3

Query: 9   YRGNNQIVFXXXXXXXXXXXXXXPWLLEPSYMVHIQASEEALGAIAILLGKKHGKIRESM 188
           +RG  QI+               P LLEP Y+V IQA E+ALG I  +L +K G + E M
Sbjct: 51  HRGGGQIIPTARRVFYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEM 110

Query: 189 LSQNCQTYSIRAVLPGREYYEFCGALSTATSGRAFLLQCAFYQWEPVKSDPLEVGSPAWG 368
                  Y+I+A LP  E + F G L  ATSG+AF  QC F  W+ + SDPLE GS A  
Sbjct: 111 QRPGTPLYNIKAYLPVVESFGFSGTLRAATSGQAF-PQCVFDHWDMMSSDPLESGSQAAT 169

Query: 369 LVRAIRARQGLK 404
           LV  IR R+GLK
Sbjct: 170 LVTDIRKRKGLK 181


>ref|XP_002513404.1| eukaryotic translation elongation factor, putative [Ricinus communis]
            gi|223547312|gb|EEF48807.1| eukaryotic translation
            elongation factor, putative [Ricinus communis]
          Length = 843

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 57/132 (43%), Positives = 73/132 (55%)
 Frame = +3

Query: 9    YRGNNQIVFXXXXXXXXXXXXXXPWLLEPSYMVHIQASEEALGAIAILLGKKHGKIRESM 188
            +RG  Q++               P LLEP Y+V IQA E+ALG I  +L +K G + E M
Sbjct: 700  HRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEM 759

Query: 189  LSQNCQTYSIRAVLPGREYYEFCGALSTATSGRAFLLQCAFYQWEPVKSDPLEVGSPAWG 368
                   Y+I+A LP  E + F G L  ATSG+AF  QC F  W+ + SDP+E GS A  
Sbjct: 760  QRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAF-PQCVFDHWDMMSSDPMEAGSQAAQ 818

Query: 369  LVRAIRARQGLK 404
            LV  IR R+GLK
Sbjct: 819  LVTDIRKRKGLK 830


>ref|XP_003596166.1| Elongation factor EF-2 [Medicago truncatula]
            gi|355485214|gb|AES66417.1| Elongation factor EF-2
            [Medicago truncatula]
          Length = 843

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 59/132 (44%), Positives = 72/132 (54%)
 Frame = +3

Query: 9    YRGNNQIVFXXXXXXXXXXXXXXPWLLEPSYMVHIQASEEALGAIAILLGKKHGKIRESM 188
            +RG  QI+               P LLEP YMV IQA E+ALG I  +L +K G + E M
Sbjct: 700  HRGGGQIIPTARRVFYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEM 759

Query: 189  LSQNCQTYSIRAVLPGREYYEFCGALSTATSGRAFLLQCAFYQWEPVKSDPLEVGSPAWG 368
                   Y+I+A LP  E + F   L  ATSG+AF  QC F  W+ + SDPLE GS A  
Sbjct: 760  QRPGTPLYNIKAYLPVIESFGFSSQLRAATSGQAF-PQCVFDHWDMMSSDPLEAGSQAAT 818

Query: 369  LVRAIRARQGLK 404
            LV  IR R+GLK
Sbjct: 819  LVTDIRKRKGLK 830


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