BLASTX nr result

ID: Coptis24_contig00036137 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00036137
         (421 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276054.1| PREDICTED: uncharacterized protein LOC100258...    92   5e-28
emb|CBI40437.3| unnamed protein product [Vitis vinifera]               92   5e-28
emb|CAN75717.1| hypothetical protein VITISV_007758 [Vitis vinifera]    92   2e-27
ref|XP_003529933.1| PREDICTED: uncharacterized protein LOC100777...    91   6e-25
ref|XP_003622497.1| Transmembrane protein 8B [Medicago truncatul...    93   8e-25

>ref|XP_002276054.1| PREDICTED: uncharacterized protein LOC100258534 [Vitis vinifera]
          Length = 823

 Score = 92.0 bits (227), Expect(2) = 5e-28
 Identities = 42/81 (51%), Positives = 54/81 (66%), Gaps = 1/81 (1%)
 Frame = +1

Query: 100 NSQFLYL-EGIWSFGLRHPVRVDGSYKVQTVMFISTERCPQGCSSHGTCENNLDGHASTL 276
           N   LY+ EG W+FGLR+      +   QT M IS ERCP+ CSSHG C++ +D    T 
Sbjct: 493 NFYILYVREGSWNFGLRYLNSSSSTSTAQTTMSISLERCPKRCSSHGQCQSAVDASGLTF 552

Query: 277 YSYCSCGPDHGGFDCSIEILS 339
           YSYC+C  +HGGFDCS+EI+S
Sbjct: 553 YSYCACDRNHGGFDCSVEIVS 573



 Score = 57.4 bits (137), Expect(2) = 5e-28
 Identities = 25/40 (62%), Positives = 33/40 (82%)
 Frame = +2

Query: 2   ALPSLETWDCYYGNKTISSKGSVLYKLYNSSEKTVSFYIL 121
           ALP+ +TWD +Y NKT SS GS+ + LYNSSE++V+FYIL
Sbjct: 458 ALPTHDTWDYFYANKTSSSDGSMFFMLYNSSEESVNFYIL 497


>emb|CBI40437.3| unnamed protein product [Vitis vinifera]
          Length = 805

 Score = 92.0 bits (227), Expect(2) = 5e-28
 Identities = 42/81 (51%), Positives = 54/81 (66%), Gaps = 1/81 (1%)
 Frame = +1

Query: 100 NSQFLYL-EGIWSFGLRHPVRVDGSYKVQTVMFISTERCPQGCSSHGTCENNLDGHASTL 276
           N   LY+ EG W+FGLR+      +   QT M IS ERCP+ CSSHG C++ +D    T 
Sbjct: 475 NFYILYVREGSWNFGLRYLNSSSSTSTAQTTMSISLERCPKRCSSHGQCQSAVDASGLTF 534

Query: 277 YSYCSCGPDHGGFDCSIEILS 339
           YSYC+C  +HGGFDCS+EI+S
Sbjct: 535 YSYCACDRNHGGFDCSVEIVS 555



 Score = 57.4 bits (137), Expect(2) = 5e-28
 Identities = 25/40 (62%), Positives = 33/40 (82%)
 Frame = +2

Query: 2   ALPSLETWDCYYGNKTISSKGSVLYKLYNSSEKTVSFYIL 121
           ALP+ +TWD +Y NKT SS GS+ + LYNSSE++V+FYIL
Sbjct: 440 ALPTHDTWDYFYANKTSSSDGSMFFMLYNSSEESVNFYIL 479


>emb|CAN75717.1| hypothetical protein VITISV_007758 [Vitis vinifera]
          Length = 728

 Score = 92.0 bits (227), Expect(2) = 2e-27
 Identities = 42/81 (51%), Positives = 54/81 (66%), Gaps = 1/81 (1%)
 Frame = +1

Query: 100 NSQFLYL-EGIWSFGLRHPVRVDGSYKVQTVMFISTERCPQGCSSHGTCENNLDGHASTL 276
           N   LY+ EG W+FGLR+      +   QT M IS ERCP+ CSSHG C++ +D    T 
Sbjct: 398 NFYILYVREGSWNFGLRYLNSSSSTSTAQTTMSISLERCPKRCSSHGQCQSAVDASGLTF 457

Query: 277 YSYCSCGPDHGGFDCSIEILS 339
           YSYC+C  +HGGFDCS+EI+S
Sbjct: 458 YSYCACDRNHGGFDCSVEIVS 478



 Score = 55.1 bits (131), Expect(2) = 2e-27
 Identities = 24/40 (60%), Positives = 32/40 (80%)
 Frame = +2

Query: 2   ALPSLETWDCYYGNKTISSKGSVLYKLYNSSEKTVSFYIL 121
           ALP+ +TWD +Y NK  SS GS+ + LYNSSE++V+FYIL
Sbjct: 363 ALPTHDTWDYFYANKXSSSDGSMFFMLYNSSEESVNFYIL 402


>ref|XP_003529933.1| PREDICTED: uncharacterized protein LOC100777848 [Glycine max]
          Length = 825

 Score = 91.3 bits (225), Expect(2) = 6e-25
 Identities = 42/73 (57%), Positives = 48/73 (65%)
 Frame = +1

Query: 121 EGIWSFGLRHPVRVDGSYKVQTVMFISTERCPQGCSSHGTCENNLDGHASTLYSYCSCGP 300
           EG W  GLRH      S K QTVM IS E CP+ CSSHG C+ + D    T YS+CSC  
Sbjct: 502 EGTWGIGLRHLYIGSDSLKAQTVMSISLEGCPKQCSSHGDCKYSFDASGLTSYSFCSCDR 561

Query: 301 DHGGFDCSIEILS 339
           +HGGFDCSIEI+S
Sbjct: 562 NHGGFDCSIEIVS 574



 Score = 47.8 bits (112), Expect(2) = 6e-25
 Identities = 20/39 (51%), Positives = 27/39 (69%)
 Frame = +2

Query: 5   LPSLETWDCYYGNKTISSKGSVLYKLYNSSEKTVSFYIL 121
           LPSL +WD YY N+T  S  SV + LY+SS+  + FYI+
Sbjct: 460 LPSLHSWDYYYANRTRKSDQSVFFMLYDSSDDEIDFYII 498


>ref|XP_003622497.1| Transmembrane protein 8B [Medicago truncatula]
           gi|355497512|gb|AES78715.1| Transmembrane protein 8B
           [Medicago truncatula]
          Length = 839

 Score = 93.2 bits (230), Expect(2) = 8e-25
 Identities = 44/84 (52%), Positives = 54/84 (64%), Gaps = 3/84 (3%)
 Frame = +1

Query: 97  KNSQFLYL---EGIWSFGLRHPVRVDGSYKVQTVMFISTERCPQGCSSHGTCENNLDGHA 267
           KN  F  +   EG W+FGLRH      S K QT+M IS E CP+ CSSHG C+ + D   
Sbjct: 500 KNIDFYIIYAREGTWNFGLRHVNTSSDSLKQQTIMSISLEGCPKQCSSHGDCKYSFDATG 559

Query: 268 STLYSYCSCGPDHGGFDCSIEILS 339
            T YS+CSC  +HGGFDCS+EI+S
Sbjct: 560 LTSYSFCSCDRNHGGFDCSVEIVS 583



 Score = 45.4 bits (106), Expect(2) = 8e-25
 Identities = 19/39 (48%), Positives = 27/39 (69%)
 Frame = +2

Query: 5   LPSLETWDCYYGNKTISSKGSVLYKLYNSSEKTVSFYIL 121
           LPS++  D YY NKT  S  S+ + LY+SS+K + FYI+
Sbjct: 469 LPSVDNRDYYYANKTTKSNQSMFFMLYDSSDKNIDFYII 507


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