BLASTX nr result

ID: Coptis24_contig00036127 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00036127
         (364 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003534964.1| PREDICTED: uncharacterized protein LOC100782...    63   3e-08
ref|XP_003546522.1| PREDICTED: uncharacterized protein LOC100817...    58   9e-07
ref|XP_002540459.1| conserved hypothetical protein [Ricinus comm...    58   9e-07
ref|XP_002326304.1| predicted protein [Populus trichocarpa] gi|2...    55   8e-06

>ref|XP_003534964.1| PREDICTED: uncharacterized protein LOC100782725 [Glycine max]
          Length = 206

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 32/61 (52%), Positives = 46/61 (75%)
 Frame = +3

Query: 120 MDVLESQLEAIFFINHLSFDFLTILASSLWTWVAVLTATVSLWKIRAVGVHVHSPQTKSD 299
           M+VL+S +EA+ F N+LSF FLT L ++LWTW+A+LTA +S WKIR+ G     P+T++ 
Sbjct: 1   MNVLDSNVEALAF-NYLSFGFLTAL-NNLWTWLALLTAALSFWKIRSAGCPKPRPKTEAQ 58

Query: 300 A 302
           A
Sbjct: 59  A 59


>ref|XP_003546522.1| PREDICTED: uncharacterized protein LOC100817225 [Glycine max]
          Length = 203

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 30/70 (42%), Positives = 46/70 (65%)
 Frame = +3

Query: 120 MDVLESQLEAIFFINHLSFDFLTILASSLWTWVAVLTATVSLWKIRAVGVHVHSPQTKSD 299
           M+VL+S +EA+ F N+LSF  LT L ++LWTW+A+LTA  S WKIR+ G     P+ ++ 
Sbjct: 1   MNVLDSNVEALAF-NYLSFGLLTAL-NNLWTWLALLTAAFSFWKIRSTGCLKPEPKPEAQ 58

Query: 300 ASHEQQIQEE 329
              +  I+ +
Sbjct: 59  VQAQPSIRPD 68


>ref|XP_002540459.1| conserved hypothetical protein [Ricinus communis]
           gi|223495580|gb|EEF21924.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 194

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 28/61 (45%), Positives = 44/61 (72%)
 Frame = +3

Query: 120 MDVLESQLEAIFFINHLSFDFLTILASSLWTWVAVLTATVSLWKIRAVGVHVHSPQTKSD 299
           M+VL+S+LEA+ F +++SF   T++ ++LWTWVA+LTA VS W+I+  G+    P+  S 
Sbjct: 1   MNVLDSRLEALAF-DYVSFGIFTVV-NNLWTWVALLTAAVSFWRIKTAGLKSEQPRVLSS 58

Query: 300 A 302
           A
Sbjct: 59  A 59


>ref|XP_002326304.1| predicted protein [Populus trichocarpa] gi|222833497|gb|EEE71974.1|
           predicted protein [Populus trichocarpa]
          Length = 170

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 26/49 (53%), Positives = 39/49 (79%)
 Frame = +3

Query: 120 MDVLESQLEAIFFINHLSFDFLTILASSLWTWVAVLTATVSLWKIRAVG 266
           MDVL+S ++A+ F ++++   LTI+ ++LWTWVAV+TA VS W+IRA G
Sbjct: 1   MDVLDSPIDALVF-DYVNLGILTII-NNLWTWVAVITAAVSFWRIRAAG 47


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