BLASTX nr result

ID: Coptis24_contig00036126 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00036126
         (499 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002313411.1| copper transporter [Populus trichocarpa] gi|...   112   3e-23
emb|CBI16036.3| unnamed protein product [Vitis vinifera]              112   4e-23
ref|XP_002280132.1| PREDICTED: copper transporter 1 [Vitis vinif...   112   4e-23
ref|XP_002313412.1| copper transporter [Populus trichocarpa] gi|...   112   4e-23
ref|XP_002280121.1| PREDICTED: copper transporter 6 [Vitis vinif...   111   7e-23

>ref|XP_002313411.1| copper transporter [Populus trichocarpa]
           gi|118485983|gb|ABK94836.1| unknown [Populus
           trichocarpa] gi|222849819|gb|EEE87366.1| copper
           transporter [Populus trichocarpa]
          Length = 162

 Score =  112 bits (280), Expect = 3e-23
 Identities = 58/112 (51%), Positives = 78/112 (69%), Gaps = 3/112 (2%)
 Frame = -1

Query: 370 MQMTFYWGKDSELLFSGFPG---EKTGMYXXXXXXXXXXXXXXXXLSHTRLTKGGGTNYV 200
           M MTF+WGK +E+LFSG+PG   ++  MY                LSH +L K G +N+V
Sbjct: 36  MHMTFFWGKSTEILFSGWPGSSDKRPHMYFVALLFVFVLSILVEWLSHCQLMKPG-SNHV 94

Query: 199 ANALVQTFIHGVRVGLAFLVMLAVMSFNVGVLIAAVSGHTIGFLFFGTALFR 44
           A  LVQT +H +RVGLA++VMLA+MSFN GV +AAV+GHT+GFLFFG+ +F+
Sbjct: 95  AAGLVQTLLHALRVGLAYMVMLAIMSFNGGVFLAAVAGHTLGFLFFGSRVFK 146


>emb|CBI16036.3| unnamed protein product [Vitis vinifera]
          Length = 160

 Score =  112 bits (279), Expect = 4e-23
 Identities = 55/109 (50%), Positives = 74/109 (67%)
 Frame = -1

Query: 370 MQMTFYWGKDSELLFSGFPGEKTGMYXXXXXXXXXXXXXXXXLSHTRLTKGGGTNYVANA 191
           M MTFYWGK +E+LFSG+PG ++GMY                LSH +L K G T +VA  
Sbjct: 34  MHMTFYWGKKAEILFSGWPGTRSGMYALALIVVFVMAIIVEWLSHFQLIKPGST-HVAAG 92

Query: 190 LVQTFIHGVRVGLAFLVMLAVMSFNVGVLIAAVSGHTIGFLFFGTALFR 44
           +VQT +H +R+GL ++VMLA+MSFN G+ + AV+GH +GFL FG+ LFR
Sbjct: 93  VVQTLLHAIRMGLEYMVMLALMSFNGGMFLVAVAGHAVGFLVFGSRLFR 141


>ref|XP_002280132.1| PREDICTED: copper transporter 1 [Vitis vinifera]
           gi|321496076|gb|ADW93915.1| copper transporter [Vitis
           vinifera]
          Length = 177

 Score =  112 bits (279), Expect = 4e-23
 Identities = 55/109 (50%), Positives = 74/109 (67%)
 Frame = -1

Query: 370 MQMTFYWGKDSELLFSGFPGEKTGMYXXXXXXXXXXXXXXXXLSHTRLTKGGGTNYVANA 191
           M MTFYWGK +E+LFSG+PG ++GMY                LSH +L K G T +VA  
Sbjct: 51  MHMTFYWGKKAEILFSGWPGTRSGMYALALIVVFVMAIIVEWLSHFQLIKPGST-HVAAG 109

Query: 190 LVQTFIHGVRVGLAFLVMLAVMSFNVGVLIAAVSGHTIGFLFFGTALFR 44
           +VQT +H +R+GL ++VMLA+MSFN G+ + AV+GH +GFL FG+ LFR
Sbjct: 110 VVQTLLHAIRMGLEYMVMLALMSFNGGMFLVAVAGHAVGFLVFGSRLFR 158


>ref|XP_002313412.1| copper transporter [Populus trichocarpa]
           gi|222849820|gb|EEE87367.1| copper transporter [Populus
           trichocarpa]
          Length = 155

 Score =  112 bits (279), Expect = 4e-23
 Identities = 57/107 (53%), Positives = 70/107 (65%)
 Frame = -1

Query: 364 MTFYWGKDSELLFSGFPGEKTGMYXXXXXXXXXXXXXXXXLSHTRLTKGGGTNYVANALV 185
           MTF+WGKD+ +LFSG+PG  TGMY                LSH RL K G  N VA  L+
Sbjct: 32  MTFFWGKDTLILFSGWPGTSTGMYVLALVFIFVLAVLVEWLSHCRLVKPGSNN-VAAGLI 90

Query: 184 QTFIHGVRVGLAFLVMLAVMSFNVGVLIAAVSGHTIGFLFFGTALFR 44
           Q  +H VRVGLA++VMLAVMSFN GV I AV+GH +GF  FG+ +F+
Sbjct: 91  QALMHAVRVGLAYMVMLAVMSFNGGVFIVAVAGHLVGFFIFGSRVFK 137


>ref|XP_002280121.1| PREDICTED: copper transporter 6 [Vitis vinifera]
           gi|321496078|gb|ADW93916.1| copper transporter [Vitis
           vinifera]
          Length = 151

 Score =  111 bits (277), Expect = 7e-23
 Identities = 55/109 (50%), Positives = 74/109 (67%)
 Frame = -1

Query: 370 MQMTFYWGKDSELLFSGFPGEKTGMYXXXXXXXXXXXXXXXXLSHTRLTKGGGTNYVANA 191
           M MTFYWGK++E+LFSG+PG ++GMY                LS+ RL K G T + A  
Sbjct: 30  MHMTFYWGKEAEILFSGWPGARSGMYALALIVVFVMGIIVEWLSYCRLIKPGST-HAAAG 88

Query: 190 LVQTFIHGVRVGLAFLVMLAVMSFNVGVLIAAVSGHTIGFLFFGTALFR 44
           LVQT +H +R+GLA++VMLA+MSFN GV + AV+GH +GFL FG+ + R
Sbjct: 89  LVQTLLHTIRIGLAYMVMLALMSFNGGVFLVAVAGHAVGFLVFGSRVCR 137