BLASTX nr result

ID: Coptis24_contig00036101 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00036101
         (580 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631223.1| PREDICTED: protein NIM1-INTERACTING 2-like [...    69   8e-10
ref|XP_002312395.1| predicted protein [Populus trichocarpa] gi|2...    65   1e-08
gb|ABK96493.1| unknown [Populus trichocarpa x Populus deltoides]       58   1e-06
ref|XP_003631222.1| PREDICTED: uncharacterized protein LOC100243...    57   3e-06

>ref|XP_003631223.1| PREDICTED: protein NIM1-INTERACTING 2-like [Vitis vinifera]
          Length = 103

 Score = 68.6 bits (166), Expect = 8e-10
 Identities = 39/78 (50%), Positives = 49/78 (62%), Gaps = 1/78 (1%)
 Frame = -2

Query: 363 FFAIIRRFHSAVRYFKKENDKGKGKLTEKSASWKPDFLVRELE-ECNGVMKNKGKKEERV 187
           FFAI+RR H AV+YF  EN  G G   ++   WKP F   + + E N V   K KKEE V
Sbjct: 30  FFAILRRIHVAVKYF--ENSNGPGMAAKR---WKPSFEREDFQVEANDVKIGKKKKEEGV 84

Query: 186 EENGGLDLNLDPESDPNS 133
           EEN GLDLN+ PE++ +S
Sbjct: 85  EENKGLDLNVGPETEDSS 102


>ref|XP_002312395.1| predicted protein [Populus trichocarpa] gi|222852215|gb|EEE89762.1|
           predicted protein [Populus trichocarpa]
          Length = 115

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 44/119 (36%), Positives = 63/119 (52%), Gaps = 5/119 (4%)
 Frame = -2

Query: 483 KRKREGEINER----KTKKRGDNGGQXXXXXXXXXXXXXXXXXEFFAIIRRFHSAVRYFK 316
           K++++GE+N++    + K + DNGGQ                  FFAI+ R H AV+YFK
Sbjct: 5   KKRKQGELNDKVPDAQKKAQEDNGGQRQTAEATNAEVDE-----FFAILERIHVAVKYFK 59

Query: 315 KENDKGKGKLTEKSASWKPDFLVRELE-ECNGVMKNKGKKEERVEENGGLDLNLDPESD 142
           + N+ G+     +S       L   LE E +G+  +  KKEE VEEN G DLN DPE +
Sbjct: 60  EANEDGRNLAEVRS-------LESGLEVEGSGMKVSDIKKEEGVEENVGFDLNADPEPE 111


>gb|ABK96493.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 115

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 41/119 (34%), Positives = 62/119 (52%), Gaps = 5/119 (4%)
 Frame = -2

Query: 483 KRKREGEINER----KTKKRGDNGGQXXXXXXXXXXXXXXXXXEFFAIIRRFHSAVRYFK 316
           K++++GE+N++    + K + DNGGQ                  FFAI+ R H AV+YF+
Sbjct: 5   KKRKQGELNDKVPDAQKKAQEDNGGQRQTAEATNAEVDE-----FFAILERIHVAVKYFE 59

Query: 315 KENDKGKGKLTEKSASWKPDFLVRELE-ECNGVMKNKGKKEERVEENGGLDLNLDPESD 142
           + ++  +     +S       L   LE E +G+  +  KKEE VEEN G DLN DPE +
Sbjct: 60  EAHEDRRNLAEVRS-------LESGLEVEGSGMKVSDIKKEEGVEENVGFDLNADPEPE 111


>ref|XP_003631222.1| PREDICTED: uncharacterized protein LOC100243974 [Vitis vinifera]
           gi|147785689|emb|CAN70911.1| hypothetical protein
           VITISV_043913 [Vitis vinifera]
          Length = 121

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 31/77 (40%), Positives = 44/77 (57%)
 Frame = -2

Query: 363 FFAIIRRFHSAVRYFKKENDKGKGKLTEKSASWKPDFLVRELEECNGVMKNKGKKEERVE 184
           F+AI+RR H+AV YF+K    G+ +   K + W+       LEE  G    K K+ E VE
Sbjct: 40  FYAILRRIHAAVTYFEKGTGDGR-RSPVKGSKWRQGLEKEILEEVKGAGGEKLKRIEDVE 98

Query: 183 ENGGLDLNLDPESDPNS 133
           EN G DLN++P  D ++
Sbjct: 99  ENVGFDLNVNPGFDEDA 115


Top