BLASTX nr result
ID: Coptis24_contig00036101
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00036101 (580 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003631223.1| PREDICTED: protein NIM1-INTERACTING 2-like [... 69 8e-10 ref|XP_002312395.1| predicted protein [Populus trichocarpa] gi|2... 65 1e-08 gb|ABK96493.1| unknown [Populus trichocarpa x Populus deltoides] 58 1e-06 ref|XP_003631222.1| PREDICTED: uncharacterized protein LOC100243... 57 3e-06 >ref|XP_003631223.1| PREDICTED: protein NIM1-INTERACTING 2-like [Vitis vinifera] Length = 103 Score = 68.6 bits (166), Expect = 8e-10 Identities = 39/78 (50%), Positives = 49/78 (62%), Gaps = 1/78 (1%) Frame = -2 Query: 363 FFAIIRRFHSAVRYFKKENDKGKGKLTEKSASWKPDFLVRELE-ECNGVMKNKGKKEERV 187 FFAI+RR H AV+YF EN G G ++ WKP F + + E N V K KKEE V Sbjct: 30 FFAILRRIHVAVKYF--ENSNGPGMAAKR---WKPSFEREDFQVEANDVKIGKKKKEEGV 84 Query: 186 EENGGLDLNLDPESDPNS 133 EEN GLDLN+ PE++ +S Sbjct: 85 EENKGLDLNVGPETEDSS 102 >ref|XP_002312395.1| predicted protein [Populus trichocarpa] gi|222852215|gb|EEE89762.1| predicted protein [Populus trichocarpa] Length = 115 Score = 64.7 bits (156), Expect = 1e-08 Identities = 44/119 (36%), Positives = 63/119 (52%), Gaps = 5/119 (4%) Frame = -2 Query: 483 KRKREGEINER----KTKKRGDNGGQXXXXXXXXXXXXXXXXXEFFAIIRRFHSAVRYFK 316 K++++GE+N++ + K + DNGGQ FFAI+ R H AV+YFK Sbjct: 5 KKRKQGELNDKVPDAQKKAQEDNGGQRQTAEATNAEVDE-----FFAILERIHVAVKYFK 59 Query: 315 KENDKGKGKLTEKSASWKPDFLVRELE-ECNGVMKNKGKKEERVEENGGLDLNLDPESD 142 + N+ G+ +S L LE E +G+ + KKEE VEEN G DLN DPE + Sbjct: 60 EANEDGRNLAEVRS-------LESGLEVEGSGMKVSDIKKEEGVEENVGFDLNADPEPE 111 >gb|ABK96493.1| unknown [Populus trichocarpa x Populus deltoides] Length = 115 Score = 58.2 bits (139), Expect = 1e-06 Identities = 41/119 (34%), Positives = 62/119 (52%), Gaps = 5/119 (4%) Frame = -2 Query: 483 KRKREGEINER----KTKKRGDNGGQXXXXXXXXXXXXXXXXXEFFAIIRRFHSAVRYFK 316 K++++GE+N++ + K + DNGGQ FFAI+ R H AV+YF+ Sbjct: 5 KKRKQGELNDKVPDAQKKAQEDNGGQRQTAEATNAEVDE-----FFAILERIHVAVKYFE 59 Query: 315 KENDKGKGKLTEKSASWKPDFLVRELE-ECNGVMKNKGKKEERVEENGGLDLNLDPESD 142 + ++ + +S L LE E +G+ + KKEE VEEN G DLN DPE + Sbjct: 60 EAHEDRRNLAEVRS-------LESGLEVEGSGMKVSDIKKEEGVEENVGFDLNADPEPE 111 >ref|XP_003631222.1| PREDICTED: uncharacterized protein LOC100243974 [Vitis vinifera] gi|147785689|emb|CAN70911.1| hypothetical protein VITISV_043913 [Vitis vinifera] Length = 121 Score = 56.6 bits (135), Expect = 3e-06 Identities = 31/77 (40%), Positives = 44/77 (57%) Frame = -2 Query: 363 FFAIIRRFHSAVRYFKKENDKGKGKLTEKSASWKPDFLVRELEECNGVMKNKGKKEERVE 184 F+AI+RR H+AV YF+K G+ + K + W+ LEE G K K+ E VE Sbjct: 40 FYAILRRIHAAVTYFEKGTGDGR-RSPVKGSKWRQGLEKEILEEVKGAGGEKLKRIEDVE 98 Query: 183 ENGGLDLNLDPESDPNS 133 EN G DLN++P D ++ Sbjct: 99 ENVGFDLNVNPGFDEDA 115