BLASTX nr result

ID: Coptis24_contig00036100 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00036100
         (448 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32420.3| unnamed protein product [Vitis vinifera]               40   6e-06
ref|XP_002285223.1| PREDICTED: calmodulin-like protein 1 [Vitis ...    40   7e-06
emb|CAN70198.1| hypothetical protein VITISV_021219 [Vitis vinifera]    40   7e-06

>emb|CBI32420.3| unnamed protein product [Vitis vinifera]
          Length = 291

 Score = 39.7 bits (91), Expect(2) = 6e-06
 Identities = 22/43 (51%), Positives = 26/43 (60%), Gaps = 3/43 (6%)
 Frame = -3

Query: 191 VLRPLEKQILEMEVTKAF---DADGDSFIDFKKLKNLHKKGYG 72
           VL  L K+ +  EV K F   D DGD FIDFK+   +HKKG G
Sbjct: 70  VLGALVKEGVRTEVEKIFQVADLDGDGFIDFKEFVEVHKKGGG 112



 Score = 35.0 bits (79), Expect(2) = 6e-06
 Identities = 21/46 (45%), Positives = 31/46 (67%), Gaps = 2/46 (4%)
 Frame = -2

Query: 363 YNLS*R-LPSKPTRR-GSQEGQWSGLPFSFQTNVEEMKQVFDRFDA 232
           YN+S R    KP+R   S++ Q S LP  F  N++E+K+VFD+FD+
Sbjct: 11  YNISKRKYLRKPSRLFSSRDRQNSDLPPIFHLNMDELKKVFDKFDS 56


>ref|XP_002285223.1| PREDICTED: calmodulin-like protein 1 [Vitis vinifera]
          Length = 182

 Score = 39.7 bits (91), Expect(2) = 7e-06
 Identities = 22/43 (51%), Positives = 26/43 (60%), Gaps = 3/43 (6%)
 Frame = -3

Query: 191 VLRPLEKQILEMEVTKAF---DADGDSFIDFKKLKNLHKKGYG 72
           VL  L K+ +  EV K F   D DGD FIDFK+   +HKKG G
Sbjct: 70  VLGALVKEGVRTEVEKIFQVADLDGDGFIDFKEFVEVHKKGGG 112



 Score = 35.0 bits (79), Expect(2) = 7e-06
 Identities = 21/46 (45%), Positives = 31/46 (67%), Gaps = 2/46 (4%)
 Frame = -2

Query: 363 YNLS*R-LPSKPTRR-GSQEGQWSGLPFSFQTNVEEMKQVFDRFDA 232
           YN+S R    KP+R   S++ Q S LP  F  N++E+K+VFD+FD+
Sbjct: 11  YNISKRKYLRKPSRLFSSRDRQNSDLPPIFHLNMDELKKVFDKFDS 56


>emb|CAN70198.1| hypothetical protein VITISV_021219 [Vitis vinifera]
          Length = 182

 Score = 39.7 bits (91), Expect(2) = 7e-06
 Identities = 22/43 (51%), Positives = 26/43 (60%), Gaps = 3/43 (6%)
 Frame = -3

Query: 191 VLRPLEKQILEMEVTKAF---DADGDSFIDFKKLKNLHKKGYG 72
           VL  L K+ +  EV K F   D DGD FIDFK+   +HKKG G
Sbjct: 70  VLGALVKEGVRTEVEKIFQVADLDGDGFIDFKEFVEVHKKGGG 112



 Score = 35.0 bits (79), Expect(2) = 7e-06
 Identities = 21/46 (45%), Positives = 31/46 (67%), Gaps = 2/46 (4%)
 Frame = -2

Query: 363 YNLS*R-LPSKPTRR-GSQEGQWSGLPFSFQTNVEEMKQVFDRFDA 232
           YN+S R    KP+R   S++ Q S LP  F  N++E+K+VFD+FD+
Sbjct: 11  YNISKRKYLRKPSRLFSSRDRQNSDLPPIFHLNMDELKKVFDKFDS 56


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