BLASTX nr result

ID: Coptis24_contig00036077 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00036077
         (388 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265763.2| PREDICTED: uncharacterized protein LOC100252...    58   7e-07
emb|CBI18590.3| unnamed protein product [Vitis vinifera]               58   7e-07
emb|CAN76156.1| hypothetical protein VITISV_041487 [Vitis vinifera]    58   7e-07
ref|XP_002525000.1| conserved hypothetical protein [Ricinus comm...    57   1e-06

>ref|XP_002265763.2| PREDICTED: uncharacterized protein LOC100252823 [Vitis vinifera]
          Length = 1771

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 47/126 (37%), Positives = 61/126 (48%), Gaps = 2/126 (1%)
 Frame = -3

Query: 386  GTSKPTHSNTFTVPRNNLGYTSLSCQTWDSMDGLN-ERVVAQGNSKYIVRKGDQVSLDTT 210
            GTS    SN     +  L   SLS    D   GLN ER+VA+G++K  +R+ + V   + 
Sbjct: 661  GTSLSASSNARVTQKTELEKASLSR---DHTAGLNKERLVAKGSNKLNIREDNNVVTPSP 717

Query: 209  QISSNANHMASSARVA-NSSLNFLHTPETLDERTQLPCSKTFESLNLENFQKRIMPKGPS 33
             I   A+    +  VA NSSLNF  T   L+   Q P      S+   N +KR MP G S
Sbjct: 718  IIKGKASRGPRTGPVAANSSLNFPRTSGALEGWEQSPGVNKIHSIGATNNRKRPMPTGSS 777

Query: 32   SYPMIQ 15
            S PM Q
Sbjct: 778  SPPMAQ 783


>emb|CBI18590.3| unnamed protein product [Vitis vinifera]
          Length = 1297

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 47/126 (37%), Positives = 61/126 (48%), Gaps = 2/126 (1%)
 Frame = -3

Query: 386 GTSKPTHSNTFTVPRNNLGYTSLSCQTWDSMDGLN-ERVVAQGNSKYIVRKGDQVSLDTT 210
           GTS    SN     +  L   SLS    D   GLN ER+VA+G++K  +R+ + V   + 
Sbjct: 377 GTSLSASSNARVTQKTELEKASLSR---DHTAGLNKERLVAKGSNKLNIREDNNVVTPSP 433

Query: 209 QISSNANHMASSARVA-NSSLNFLHTPETLDERTQLPCSKTFESLNLENFQKRIMPKGPS 33
            I   A+    +  VA NSSLNF  T   L+   Q P      S+   N +KR MP G S
Sbjct: 434 IIKGKASRGPRTGPVAANSSLNFPRTSGALEGWEQSPGVNKIHSIGATNNRKRPMPTGSS 493

Query: 32  SYPMIQ 15
           S PM Q
Sbjct: 494 SPPMAQ 499


>emb|CAN76156.1| hypothetical protein VITISV_041487 [Vitis vinifera]
          Length = 1734

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 47/126 (37%), Positives = 61/126 (48%), Gaps = 2/126 (1%)
 Frame = -3

Query: 386  GTSKPTHSNTFTVPRNNLGYTSLSCQTWDSMDGLN-ERVVAQGNSKYIVRKGDQVSLDTT 210
            GTS    SN     +  L   SLS    D   GLN ER+VA+G++K  +R+ + V   + 
Sbjct: 731  GTSLSASSNARVTQKTELEKASLSR---DHTAGLNKERLVAKGSNKLNIREDNNVVTPSP 787

Query: 209  QISSNANHMASSARVA-NSSLNFLHTPETLDERTQLPCSKTFESLNLENFQKRIMPKGPS 33
             I   A+    +  VA NSSLNF  T   L+   Q P      S+   N +KR MP G S
Sbjct: 788  IIKGKASRGPRTGPVAANSSLNFPRTSGALEGWEQSPGVNKIHSIGATNNRKRPMPTGSS 847

Query: 32   SYPMIQ 15
            S PM Q
Sbjct: 848  SPPMAQ 853


>ref|XP_002525000.1| conserved hypothetical protein [Ricinus communis]
           gi|223535744|gb|EEF37407.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 1304

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 45/129 (34%), Positives = 58/129 (44%), Gaps = 3/129 (2%)
 Frame = -3

Query: 386 GTSKPTHSNTFTVPRNNLGYTSLSCQTWDSMDGLN-ERVVAQGNSKYIVRKGDQVSLDTT 210
           G+  P  SN   +P+N     SL   T D  DGLN ER++A+ N+K  +   + V+  + 
Sbjct: 326 GSLSPASSNPRFIPKNEPDKVSL---TRDYTDGLNKERLLAKANNKLNINNDNNVAGSSP 382

Query: 209 QISSNANHM--ASSARVANSSLNFLHTPETLDERTQLPCSKTFESLNLENFQKRIMPKGP 36
                A+      S   ANSS NF  T    D   Q P      S    N +KR MP G 
Sbjct: 383 MTKGKASRAPRTGSVMAANSSPNFSRTSGPPDGWEQTPSINKVNSFGGTNNRKRSMPAGS 442

Query: 35  SSYPMIQLV 9
           SS PM Q V
Sbjct: 443 SSPPMAQWV 451


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