BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00036065
         (681 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283111.2| PREDICTED: DNA topoisomerase 6 subunit B [Vi...   364   1e-98
emb|CBI16435.3| unnamed protein product [Vitis vinifera]              364   1e-98
ref|XP_004142138.1| PREDICTED: DNA topoisomerase 6 subunit B-lik...   363   1e-98
ref|XP_003543556.1| PREDICTED: DNA topoisomerase 6 subunit B-lik...   363   2e-98
ref|XP_003543555.1| PREDICTED: DNA topoisomerase 6 subunit B-lik...   363   2e-98

>ref|XP_002283111.2| PREDICTED: DNA topoisomerase 6 subunit B [Vitis vinifera]
          Length = 656

 Score =  364 bits (934), Expect = 1e-98
 Identities = 181/211 (85%), Positives = 192/211 (90%)
 Frame = -2

Query: 635 MDTAGSSESPIEPKKRNSKTPKKAKESVLKQKSPAEFFAENKNIAGFDNPGKSLYTTVRE 456
           M+T GSSE P EPKK  SKT +K KE+ LKQKSPAEFFAENKNIAGFDNPGKSLYTTVRE
Sbjct: 1   METGGSSEIPTEPKKTKSKTARKPKENPLKQKSPAEFFAENKNIAGFDNPGKSLYTTVRE 60

Query: 455 LVENCLDSAESISELPIIEVTIEEIGKIKFNSMIGLVDRERVDEALYDDFESVKAREKRL 276
           LVEN LDSAESISELP +E+TIEEIGK KFNSMIGLVDRER+DE LYDDFE+ KAREKRL
Sbjct: 61  LVENSLDSAESISELPEVEITIEEIGKSKFNSMIGLVDRERIDEELYDDFETAKAREKRL 120

Query: 275 AKEARNQEIQAKNATLGKKTKEPSALKGIKGRGEASFFRVTCKDNGKGMAHDDIPNMFGR 96
           AKEAR QE+QAKNA LGKK KEP A KG+KGRGEASF+RVTCKDNG+GM HDDIPNMFGR
Sbjct: 121 AKEARTQELQAKNAALGKKVKEPQASKGMKGRGEASFYRVTCKDNGRGMPHDDIPNMFGR 180

Query: 95  VLSGTKYGLKQTRGKFGLGAKMALIWSKMST 3
           VLSGTKYGLKQTRGKFGLGAKMALIWSKMST
Sbjct: 181 VLSGTKYGLKQTRGKFGLGAKMALIWSKMST 211


>emb|CBI16435.3| unnamed protein product [Vitis vinifera]
          Length = 673

 Score =  364 bits (934), Expect = 1e-98
 Identities = 181/211 (85%), Positives = 192/211 (90%)
 Frame = -2

Query: 635 MDTAGSSESPIEPKKRNSKTPKKAKESVLKQKSPAEFFAENKNIAGFDNPGKSLYTTVRE 456
           M+T GSSE P EPKK  SKT +K KE+ LKQKSPAEFFAENKNIAGFDNPGKSLYTTVRE
Sbjct: 1   METGGSSEIPTEPKKTKSKTARKPKENPLKQKSPAEFFAENKNIAGFDNPGKSLYTTVRE 60

Query: 455 LVENCLDSAESISELPIIEVTIEEIGKIKFNSMIGLVDRERVDEALYDDFESVKAREKRL 276
           LVEN LDSAESISELP +E+TIEEIGK KFNSMIGLVDRER+DE LYDDFE+ KAREKRL
Sbjct: 61  LVENSLDSAESISELPEVEITIEEIGKSKFNSMIGLVDRERIDEELYDDFETAKAREKRL 120

Query: 275 AKEARNQEIQAKNATLGKKTKEPSALKGIKGRGEASFFRVTCKDNGKGMAHDDIPNMFGR 96
           AKEAR QE+QAKNA LGKK KEP A KG+KGRGEASF+RVTCKDNG+GM HDDIPNMFGR
Sbjct: 121 AKEARTQELQAKNAALGKKVKEPQASKGMKGRGEASFYRVTCKDNGRGMPHDDIPNMFGR 180

Query: 95  VLSGTKYGLKQTRGKFGLGAKMALIWSKMST 3
           VLSGTKYGLKQTRGKFGLGAKMALIWSKMST
Sbjct: 181 VLSGTKYGLKQTRGKFGLGAKMALIWSKMST 211


>ref|XP_004142138.1| PREDICTED: DNA topoisomerase 6 subunit B-like [Cucumis sativus]
           gi|449525918|ref|XP_004169963.1| PREDICTED: DNA
           topoisomerase 6 subunit B-like [Cucumis sativus]
          Length = 696

 Score =  363 bits (933), Expect = 1e-98
 Identities = 181/211 (85%), Positives = 193/211 (91%)
 Frame = -2

Query: 635 MDTAGSSESPIEPKKRNSKTPKKAKESVLKQKSPAEFFAENKNIAGFDNPGKSLYTTVRE 456
           M+  G SESP EPKK  SKTP+K KES+LKQKSPAEFFAENKNIAGFDNPGK LYTTVRE
Sbjct: 1   MEAGGGSESPDEPKKGKSKTPRKPKESILKQKSPAEFFAENKNIAGFDNPGKCLYTTVRE 60

Query: 455 LVENCLDSAESISELPIIEVTIEEIGKIKFNSMIGLVDRERVDEALYDDFESVKAREKRL 276
           LVEN LDSAESISELP++E+TIEEI K KFNSMIGLVDRERVDE LYDD+E+ KAREKRL
Sbjct: 61  LVENSLDSAESISELPVVEITIEEILKTKFNSMIGLVDRERVDEELYDDYETAKAREKRL 120

Query: 275 AKEARNQEIQAKNATLGKKTKEPSALKGIKGRGEASFFRVTCKDNGKGMAHDDIPNMFGR 96
           AKEAR QEIQAKNA LGKK +EP+A KG+KGRGEASF+RVTCKDNGKGM HDDIPNMFGR
Sbjct: 121 AKEARAQEIQAKNAALGKKGREPAASKGMKGRGEASFYRVTCKDNGKGMPHDDIPNMFGR 180

Query: 95  VLSGTKYGLKQTRGKFGLGAKMALIWSKMST 3
           VLSGTKYGLKQTRGKFGLGAKMALIWSKMST
Sbjct: 181 VLSGTKYGLKQTRGKFGLGAKMALIWSKMST 211


>ref|XP_003543556.1| PREDICTED: DNA topoisomerase 6 subunit B-like isoform 2 [Glycine
           max]
          Length = 656

 Score =  363 bits (931), Expect = 2e-98
 Identities = 182/211 (86%), Positives = 193/211 (91%)
 Frame = -2

Query: 635 MDTAGSSESPIEPKKRNSKTPKKAKESVLKQKSPAEFFAENKNIAGFDNPGKSLYTTVRE 456
           MD  GSSESPIE KK  SKTP+K KE++LKQKSPAEFFAENKNIAGFDNPGKSLYTTVRE
Sbjct: 1   MDGDGSSESPIETKKAKSKTPRKPKETILKQKSPAEFFAENKNIAGFDNPGKSLYTTVRE 60

Query: 455 LVENCLDSAESISELPIIEVTIEEIGKIKFNSMIGLVDRERVDEALYDDFESVKAREKRL 276
           LVEN LDSAESISELP++E+TIEEIGK KFNSMIGLVDRERVD ALYDD+E+ KAREKRL
Sbjct: 61  LVENSLDSAESISELPVVEITIEEIGKSKFNSMIGLVDRERVDAALYDDYETEKAREKRL 120

Query: 275 AKEARNQEIQAKNATLGKKTKEPSALKGIKGRGEASFFRVTCKDNGKGMAHDDIPNMFGR 96
           AKEAR QE+QAKNA LGKK K+  A K IKGRGEASF+RVTCKDNGKGM HDDIPNMFGR
Sbjct: 121 AKEARAQEMQAKNAALGKKVKDTPASKAIKGRGEASFYRVTCKDNGKGMPHDDIPNMFGR 180

Query: 95  VLSGTKYGLKQTRGKFGLGAKMALIWSKMST 3
           VLSGTKYGLKQTRGKFGLGAKMALIWSKMST
Sbjct: 181 VLSGTKYGLKQTRGKFGLGAKMALIWSKMST 211


>ref|XP_003543555.1| PREDICTED: DNA topoisomerase 6 subunit B-like isoform 1 [Glycine
           max]
          Length = 673

 Score =  363 bits (931), Expect = 2e-98
 Identities = 182/211 (86%), Positives = 193/211 (91%)
 Frame = -2

Query: 635 MDTAGSSESPIEPKKRNSKTPKKAKESVLKQKSPAEFFAENKNIAGFDNPGKSLYTTVRE 456
           MD  GSSESPIE KK  SKTP+K KE++LKQKSPAEFFAENKNIAGFDNPGKSLYTTVRE
Sbjct: 1   MDGDGSSESPIETKKAKSKTPRKPKETILKQKSPAEFFAENKNIAGFDNPGKSLYTTVRE 60

Query: 455 LVENCLDSAESISELPIIEVTIEEIGKIKFNSMIGLVDRERVDEALYDDFESVKAREKRL 276
           LVEN LDSAESISELP++E+TIEEIGK KFNSMIGLVDRERVD ALYDD+E+ KAREKRL
Sbjct: 61  LVENSLDSAESISELPVVEITIEEIGKSKFNSMIGLVDRERVDAALYDDYETEKAREKRL 120

Query: 275 AKEARNQEIQAKNATLGKKTKEPSALKGIKGRGEASFFRVTCKDNGKGMAHDDIPNMFGR 96
           AKEAR QE+QAKNA LGKK K+  A K IKGRGEASF+RVTCKDNGKGM HDDIPNMFGR
Sbjct: 121 AKEARAQEMQAKNAALGKKVKDTPASKAIKGRGEASFYRVTCKDNGKGMPHDDIPNMFGR 180

Query: 95  VLSGTKYGLKQTRGKFGLGAKMALIWSKMST 3
           VLSGTKYGLKQTRGKFGLGAKMALIWSKMST
Sbjct: 181 VLSGTKYGLKQTRGKFGLGAKMALIWSKMST 211