BLASTX nr result

ID: Coptis24_contig00036059 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00036059
         (636 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004171859.1| PREDICTED: thionin-like protein 2-like [Cucu...    75   1e-11
ref|XP_002284798.1| PREDICTED: uncharacterized protein LOC100256...    69   7e-10
ref|XP_002528184.1| conserved hypothetical protein [Ricinus comm...    68   2e-09
ref|XP_002528183.1| conserved hypothetical protein [Ricinus comm...    65   8e-09
ref|XP_004171124.1| PREDICTED: thionin-like protein 2-like [Cucu...    64   3e-08

>ref|XP_004171859.1| PREDICTED: thionin-like protein 2-like [Cucumis sativus]
          Length = 108

 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 34/83 (40%), Positives = 50/83 (60%), Gaps = 10/83 (12%)
 Frame = -1

Query: 414 CFVKCNSICRLPPEL----CASRCLKQCLFHDTSDIH------HYYCKLGCETAKCTSVS 265
           C+ KC  +C + P +    C ++CL  CLF  +S +       HY+CKLGC T++CT  S
Sbjct: 25  CYAKCFIVCAITPGIPVGTCGAKCLADCLFIASSPMDLNYMDTHYFCKLGCATSRCTKFS 84

Query: 264 TLENPAGKEAVEECANSCSEICT 196
           T ++PA K+ VE C N+C + CT
Sbjct: 85  TKKDPAEKK-VESCVNTCDQTCT 106


>ref|XP_002284798.1| PREDICTED: uncharacterized protein LOC100256715 [Vitis vinifera]
          Length = 127

 Score = 68.9 bits (167), Expect = 7e-10
 Identities = 36/83 (43%), Positives = 48/83 (57%), Gaps = 10/83 (12%)
 Frame = -1

Query: 414 CFVKCNSICRLPPE----LCASRCLKQCLFH------DTSDIHHYYCKLGCETAKCTSVS 265
           C+ KC   C + P      C+  CLK C+        +T+D   Y+CKLGC ++ CT++S
Sbjct: 30  CYTKCFIFCIITPNNTAFSCSLECLKDCVIPSHPLDIETADTT-YFCKLGCASSLCTNLS 88

Query: 264 TLENPAGKEAVEECANSCSEICT 196
           T +NPAG E VE C NSCS  CT
Sbjct: 89  TKKNPAG-EKVESCVNSCSNKCT 110


>ref|XP_002528184.1| conserved hypothetical protein [Ricinus communis]
           gi|223532396|gb|EEF34191.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 116

 Score = 67.8 bits (164), Expect = 2e-09
 Identities = 35/94 (37%), Positives = 48/94 (51%), Gaps = 6/94 (6%)
 Frame = -1

Query: 453 ATQTYAVCPDLPTCFVKCNSICRLPP--ELCASRCLKQCLFHDT----SDIHHYYCKLGC 292
           A Q+ A   D  TC   C   C +PP   +C + CL +C+ H +    +D  H +C +GC
Sbjct: 19  AGQSNAWFKDFKTCLKDCLVQCAIPPWTPICPASCLAKCIIHPSYTTSTDTTHQFCTVGC 78

Query: 291 ETAKCTSVSTLENPAGKEAVEECANSCSEICTGN 190
            T+ C+ + T  NP   E VE C N CS  CT N
Sbjct: 79  ATSLCSKLITNPNP-NLEQVESCVNGCSGTCTKN 111


>ref|XP_002528183.1| conserved hypothetical protein [Ricinus communis]
           gi|223532395|gb|EEF34190.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 107

 Score = 65.5 bits (158), Expect = 8e-09
 Identities = 33/94 (35%), Positives = 48/94 (51%), Gaps = 6/94 (6%)
 Frame = -1

Query: 453 ATQTYAVCPDLPTCFVKCNSICRLPP--ELCASRCLKQCLFHDT----SDIHHYYCKLGC 292
           A Q+ A   D  TC   C   C +PP   +C + CL +C+ H +    +D  H +C +GC
Sbjct: 10  AGQSNAWFKDFKTCLKDCLVQCAIPPWTPICPASCLAKCIIHPSYTTSTDTTHQFCTVGC 69

Query: 291 ETAKCTSVSTLENPAGKEAVEECANSCSEICTGN 190
            T+ C+ + T  NP   + VE C N CS  CT +
Sbjct: 70  ATSLCSKLITNPNP-NLDQVENCVNGCSGTCTNS 102


>ref|XP_004171124.1| PREDICTED: thionin-like protein 2-like [Cucumis sativus]
          Length = 119

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 32/90 (35%), Positives = 48/90 (53%), Gaps = 15/90 (16%)
 Frame = -1

Query: 414 CFVKCNSICRLPPEL----CASRCLKQCLFH----DTSDI-------HHYYCKLGCETAK 280
           C+  C  IC + P +    C  RCL+ C+      D +D+       +H++CKLGC  + 
Sbjct: 31  CYATCFVICAITPGVAFSDCPLRCLQACIVPSFPIDDADVVHRQQQQNHFFCKLGCAASS 90

Query: 279 CTSVSTLENPAGKEAVEECANSCSEICTGN 190
           CT  ST +NP G+  V  C +SCS+ C+ N
Sbjct: 91  CTKFSTKQNP-GERKVGRCVDSCSQTCSMN 119


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