BLASTX nr result

ID: Coptis24_contig00036056 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00036056
         (274 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003529518.1| PREDICTED: DNA replication licensing factor ...   184   5e-45
ref|XP_003609791.1| DNA replication licensing factor mcm2 [Medic...   184   5e-45
gb|ACN78877.2| minichromosome maintenance 2 protein [Pisum sativum]   184   5e-45
dbj|BAC53939.1| MCM protein-like protein [Nicotiana tabacum]          184   6e-45
ref|XP_003550565.1| PREDICTED: DNA replication licensing factor ...   183   1e-44

>ref|XP_003529518.1| PREDICTED: DNA replication licensing factor mcm2-like [Glycine max]
          Length = 929

 Score =  184 bits (468), Expect = 5e-45
 Identities = 89/91 (97%), Positives = 91/91 (100%)
 Frame = -2

Query: 273 FGGQEKNVEGKHRLRGDINVLLLGDPGTAKSQFLKYVEKTGQRAVYTTGKGASAVGLTAA 94
           FGGQEKNVEGKHRLRGDINVLLLGDPGTAKSQFLKYVEKTGQRAVYTTGKGASAVGLTAA
Sbjct: 520 FGGQEKNVEGKHRLRGDINVLLLGDPGTAKSQFLKYVEKTGQRAVYTTGKGASAVGLTAA 579

Query: 93  VHKDPITKEWTLEGGALVLADRGICLIDEFD 1
           VHKDP+T+EWTLEGGALVLADRGICLIDEFD
Sbjct: 580 VHKDPVTREWTLEGGALVLADRGICLIDEFD 610


>ref|XP_003609791.1| DNA replication licensing factor mcm2 [Medicago truncatula]
           gi|355510846|gb|AES91988.1| DNA replication licensing
           factor mcm2 [Medicago truncatula]
          Length = 883

 Score =  184 bits (468), Expect = 5e-45
 Identities = 89/91 (97%), Positives = 91/91 (100%)
 Frame = -2

Query: 273 FGGQEKNVEGKHRLRGDINVLLLGDPGTAKSQFLKYVEKTGQRAVYTTGKGASAVGLTAA 94
           FGGQEKNVEGKHRLRGDINVLLLGDPGTAKSQFLKYVEKTGQRAVYTTGKGASAVGLTAA
Sbjct: 478 FGGQEKNVEGKHRLRGDINVLLLGDPGTAKSQFLKYVEKTGQRAVYTTGKGASAVGLTAA 537

Query: 93  VHKDPITKEWTLEGGALVLADRGICLIDEFD 1
           VHKDP+T+EWTLEGGALVLADRGICLIDEFD
Sbjct: 538 VHKDPVTREWTLEGGALVLADRGICLIDEFD 568


>gb|ACN78877.2| minichromosome maintenance 2 protein [Pisum sativum]
          Length = 933

 Score =  184 bits (468), Expect = 5e-45
 Identities = 89/91 (97%), Positives = 91/91 (100%)
 Frame = -2

Query: 273 FGGQEKNVEGKHRLRGDINVLLLGDPGTAKSQFLKYVEKTGQRAVYTTGKGASAVGLTAA 94
           FGGQEKNVEGKHRLRGDINVLLLGDPGTAKSQFLKYVEKTGQRAVYTTGKGASAVGLTAA
Sbjct: 527 FGGQEKNVEGKHRLRGDINVLLLGDPGTAKSQFLKYVEKTGQRAVYTTGKGASAVGLTAA 586

Query: 93  VHKDPITKEWTLEGGALVLADRGICLIDEFD 1
           VHKDP+T+EWTLEGGALVLADRGICLIDEFD
Sbjct: 587 VHKDPVTREWTLEGGALVLADRGICLIDEFD 617


>dbj|BAC53939.1| MCM protein-like protein [Nicotiana tabacum]
          Length = 865

 Score =  184 bits (467), Expect = 6e-45
 Identities = 88/91 (96%), Positives = 91/91 (100%)
 Frame = -2

Query: 273 FGGQEKNVEGKHRLRGDINVLLLGDPGTAKSQFLKYVEKTGQRAVYTTGKGASAVGLTAA 94
           FGGQEKNVEGKHRLRGDIN+LLLGDPGTAKSQFLKYVEKTGQRAVYTTGKGASAVGLTAA
Sbjct: 454 FGGQEKNVEGKHRLRGDINILLLGDPGTAKSQFLKYVEKTGQRAVYTTGKGASAVGLTAA 513

Query: 93  VHKDPITKEWTLEGGALVLADRGICLIDEFD 1
           VHKDP+T+EWTLEGGALVLADRGICLIDEFD
Sbjct: 514 VHKDPVTREWTLEGGALVLADRGICLIDEFD 544


>ref|XP_003550565.1| PREDICTED: DNA replication licensing factor mcm2-like [Glycine max]
          Length = 935

 Score =  183 bits (465), Expect = 1e-44
 Identities = 88/91 (96%), Positives = 91/91 (100%)
 Frame = -2

Query: 273 FGGQEKNVEGKHRLRGDINVLLLGDPGTAKSQFLKYVEKTGQRAVYTTGKGASAVGLTAA 94
           FGGQEKNVEGKHRLRGDINVLLLGDPGTAKSQFLKYVEKTGQRAVYTTGKGASAVGLTAA
Sbjct: 526 FGGQEKNVEGKHRLRGDINVLLLGDPGTAKSQFLKYVEKTGQRAVYTTGKGASAVGLTAA 585

Query: 93  VHKDPITKEWTLEGGALVLADRGICLIDEFD 1
           VHKDP+T+EWTLEGGALVLAD+GICLIDEFD
Sbjct: 586 VHKDPVTREWTLEGGALVLADKGICLIDEFD 616


Top