BLASTX nr result

ID: Coptis24_contig00036050 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00036050
         (765 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002519100.1| multidrug resistance pump, putative [Ricinus...   407   e-111
ref|XP_002458553.1| hypothetical protein SORBIDRAFT_03g035610 [S...   380   e-103
gb|AFW84961.1| putative MATE efflux family protein [Zea mays]         376   e-102
ref|NP_001146663.1| uncharacterized protein LOC100280263 [Zea ma...   376   e-102
ref|NP_001050703.1| Os03g0626700 [Oryza sativa Japonica Group] g...   372   e-101

>ref|XP_002519100.1| multidrug resistance pump, putative [Ricinus communis]
           gi|223541763|gb|EEF43311.1| multidrug resistance pump,
           putative [Ricinus communis]
          Length = 496

 Score =  407 bits (1045), Expect = e-111
 Identities = 194/255 (76%), Positives = 228/255 (89%)
 Frame = -1

Query: 765 LGMGSALETLCGQAVGAGQVNMLGIYMQRSWIITCITALILTPTYVFASPLLKFFRQSKD 586
           LGMGSALETLCGQAVGAGQ+NMLG+YMQ+SWIIT + AL L P Y+FASPLL+   Q KD
Sbjct: 92  LGMGSALETLCGQAVGAGQLNMLGVYMQKSWIITGVAALFLAPFYIFASPLLQLLHQDKD 151

Query: 585 ISDLAGKYSVLILPQLYAYAINFPIQKFFQSQSRVWVMTWISALVLPFHVLLNWILVTKL 406
           IS+LAGKYS+ +LPQL+A+AINFPIQKF Q+QSRVWVMT IS + L FHVLLNW+LVTKL
Sbjct: 152 ISELAGKYSIWVLPQLFAFAINFPIQKFLQAQSRVWVMTIISVIALAFHVLLNWLLVTKL 211

Query: 405 GYGLVGAAIAGNVSWWLIILAQLIYIISGYFPDAWTGFSMLAFNSLAGFVKLSLASAIML 226
            +GL+GAAIAGN+SW +I+LAQ++Y++SG+FP+AWTGFS  AF SLAGFVKLSLASA+ML
Sbjct: 212 DHGLLGAAIAGNISWLVIVLAQIVYVVSGFFPEAWTGFSCSAFKSLAGFVKLSLASAVML 271

Query: 225 CLELWYYTAVILLVGCLRNPSIAVDAVSICMNLQLWTLMVALGFNVAVSVRVSNELGARE 46
           CLELWY+TAVIL+VG L+NP IAVDA+SICMNLQLWTLM+ALGFN A+SVRVSNELGA  
Sbjct: 272 CLELWYFTAVILMVGWLKNPEIAVDAISICMNLQLWTLMIALGFNAAISVRVSNELGAGN 331

Query: 45  PKAAKFSVVMAVSTS 1
           PKAAKFSV++ V TS
Sbjct: 332 PKAAKFSVMVTVLTS 346


>ref|XP_002458553.1| hypothetical protein SORBIDRAFT_03g035610 [Sorghum bicolor]
           gi|241930528|gb|EES03673.1| hypothetical protein
           SORBIDRAFT_03g035610 [Sorghum bicolor]
          Length = 487

 Score =  380 bits (977), Expect = e-103
 Identities = 179/255 (70%), Positives = 217/255 (85%)
 Frame = -1

Query: 765 LGMGSALETLCGQAVGAGQVNMLGIYMQRSWIITCITALILTPTYVFASPLLKFFRQSKD 586
           LGMGSALETLCGQAVGAGQ+ MLG+YMQRSWII   T+L+L P YVF SP+L+  RQS D
Sbjct: 77  LGMGSALETLCGQAVGAGQLQMLGVYMQRSWIICVATSLVLLPLYVFTSPILRLLRQSAD 136

Query: 585 ISDLAGKYSVLILPQLYAYAINFPIQKFFQSQSRVWVMTWISALVLPFHVLLNWILVTKL 406
           IS ++G+Y+   +PQL+AYA+NFP+QKF+Q+QSRVWVMT IS  VL  H LLNW++V++L
Sbjct: 137 ISAVSGRYARWCVPQLFAYAVNFPMQKFYQAQSRVWVMTAISGAVLAVHALLNWLVVSRL 196

Query: 405 GYGLVGAAIAGNVSWWLIILAQLIYIISGYFPDAWTGFSMLAFNSLAGFVKLSLASAIML 226
           G GLVGAA+ G+VSWWL+ +AQ +Y++ G FP AWTGFS  AF SL GFV+LS+ASA+ML
Sbjct: 197 GRGLVGAAVVGDVSWWLVNVAQFVYLVGGSFPGAWTGFSRKAFASLGGFVRLSIASAVML 256

Query: 225 CLELWYYTAVILLVGCLRNPSIAVDAVSICMNLQLWTLMVALGFNVAVSVRVSNELGARE 46
           CLE+WYYTAV++LVGCL+NP I VDA+SICMN QLWTLMVA+GFN AVSVRVSNELGA  
Sbjct: 257 CLEMWYYTAVLILVGCLKNPEIQVDAISICMNYQLWTLMVAVGFNAAVSVRVSNELGANH 316

Query: 45  PKAAKFSVVMAVSTS 1
           PKAAKFSVV+A +TS
Sbjct: 317 PKAAKFSVVVATATS 331


>gb|AFW84961.1| putative MATE efflux family protein [Zea mays]
          Length = 554

 Score =  376 bits (966), Expect = e-102
 Identities = 178/255 (69%), Positives = 213/255 (83%)
 Frame = -1

Query: 765 LGMGSALETLCGQAVGAGQVNMLGIYMQRSWIITCITALILTPTYVFASPLLKFFRQSKD 586
           LGMGSALETLCGQAVGAGQ+ MLG+YMQRSWII   T+L L P YVF SPLL+  RQS D
Sbjct: 139 LGMGSALETLCGQAVGAGQLQMLGVYMQRSWIICLATSLALLPLYVFTSPLLRMLRQSAD 198

Query: 585 ISDLAGKYSVLILPQLYAYAINFPIQKFFQSQSRVWVMTWISALVLPFHVLLNWILVTKL 406
           IS +AG+Y+   +PQL+AYA+NFPIQKF+Q+QSRVW MT IS   L  H LL+W++V +L
Sbjct: 199 ISAVAGRYARWCVPQLFAYAVNFPIQKFYQAQSRVWAMTAISGAALAVHALLSWLVVARL 258

Query: 405 GYGLVGAAIAGNVSWWLIILAQLIYIISGYFPDAWTGFSMLAFNSLAGFVKLSLASAIML 226
           G GL GAA+ G+VSWWL+ +AQ +Y++ G FPDAWTGFS  AF+SL GFV+LS+ASA+ML
Sbjct: 259 GRGLAGAAVVGDVSWWLVNVAQFVYLVGGSFPDAWTGFSRKAFDSLGGFVRLSVASAVML 318

Query: 225 CLELWYYTAVILLVGCLRNPSIAVDAVSICMNLQLWTLMVALGFNVAVSVRVSNELGARE 46
           CLE+WYYTAV++LVGCL+NP I VDA+SICMN QLWTLMVA+GFN AVSVRVSNELGA  
Sbjct: 319 CLEMWYYTAVLILVGCLKNPEIQVDAISICMNYQLWTLMVAVGFNAAVSVRVSNELGANH 378

Query: 45  PKAAKFSVVMAVSTS 1
           PKAA+FSVV+A  TS
Sbjct: 379 PKAARFSVVVATVTS 393


>ref|NP_001146663.1| uncharacterized protein LOC100280263 [Zea mays]
           gi|219888227|gb|ACL54488.1| unknown [Zea mays]
          Length = 490

 Score =  376 bits (966), Expect = e-102
 Identities = 178/255 (69%), Positives = 213/255 (83%)
 Frame = -1

Query: 765 LGMGSALETLCGQAVGAGQVNMLGIYMQRSWIITCITALILTPTYVFASPLLKFFRQSKD 586
           LGMGSALETLCGQAVGAGQ+ MLG+YMQRSWII   T+L L P YVF SPLL+  RQS D
Sbjct: 75  LGMGSALETLCGQAVGAGQLQMLGVYMQRSWIICLATSLALLPLYVFTSPLLRMLRQSAD 134

Query: 585 ISDLAGKYSVLILPQLYAYAINFPIQKFFQSQSRVWVMTWISALVLPFHVLLNWILVTKL 406
           IS +AG+Y+   +PQL+AYA+NFPIQKF+Q+QSRVW MT IS   L  H LL+W++V +L
Sbjct: 135 ISAVAGRYARWCVPQLFAYAVNFPIQKFYQAQSRVWAMTAISGAALAVHALLSWLVVARL 194

Query: 405 GYGLVGAAIAGNVSWWLIILAQLIYIISGYFPDAWTGFSMLAFNSLAGFVKLSLASAIML 226
           G GL GAA+ G+VSWWL+ +AQ +Y++ G FPDAWTGFS  AF+SL GFV+LS+ASA+ML
Sbjct: 195 GRGLAGAAVVGDVSWWLVNVAQFVYLVGGSFPDAWTGFSRKAFDSLGGFVRLSVASAVML 254

Query: 225 CLELWYYTAVILLVGCLRNPSIAVDAVSICMNLQLWTLMVALGFNVAVSVRVSNELGARE 46
           CLE+WYYTAV++LVGCL+NP I VDA+SICMN QLWTLMVA+GFN AVSVRVSNELGA  
Sbjct: 255 CLEMWYYTAVLILVGCLKNPEIQVDAISICMNYQLWTLMVAVGFNAAVSVRVSNELGANH 314

Query: 45  PKAAKFSVVMAVSTS 1
           PKAA+FSVV+A  TS
Sbjct: 315 PKAARFSVVVATVTS 329


>ref|NP_001050703.1| Os03g0626700 [Oryza sativa Japonica Group]
           gi|16924114|gb|AAL31693.1|AC092390_14 putative multidrug
           efflux protein [Oryza sativa Japonica Group]
           gi|37718791|gb|AAR01662.1| putative MATE efflux family
           protein [Oryza sativa Japonica Group]
           gi|108709922|gb|ABF97717.1| MATE efflux family protein,
           expressed [Oryza sativa Japonica Group]
           gi|113549174|dbj|BAF12617.1| Os03g0626700 [Oryza sativa
           Japonica Group]
          Length = 477

 Score =  372 bits (954), Expect = e-101
 Identities = 181/255 (70%), Positives = 216/255 (84%)
 Frame = -1

Query: 765 LGMGSALETLCGQAVGAGQVNMLGIYMQRSWIITCITALILTPTYVFASPLLKFFRQSKD 586
           LGMGSALETLCGQAVGAGQV+MLG+Y+QRSWII   TA+ILTPTYVF + +L   RQ  D
Sbjct: 67  LGMGSALETLCGQAVGAGQVSMLGVYIQRSWIICGATAVILTPTYVFTAGILIGLRQPTD 126

Query: 585 ISDLAGKYSVLILPQLYAYAINFPIQKFFQSQSRVWVMTWISALVLPFHVLLNWILVTKL 406
           I+ +AG Y+  ++PQL+AYA NFP+QKFFQSQS+VW MT IS + L  HV+LN+I +T+L
Sbjct: 127 IAAVAGTYTRWVIPQLFAYAANFPLQKFFQSQSKVWAMTAISGIALALHVVLNYIFLTRL 186

Query: 405 GYGLVGAAIAGNVSWWLIILAQLIYIISGYFPDAWTGFSMLAFNSLAGFVKLSLASAIML 226
           G+GLV AA+ GNV+WWLIILAQ IY++SG FP+AW GFSMLAF +LA FVKLSLASAIML
Sbjct: 187 GHGLVAAALIGNVTWWLIILAQFIYLVSGCFPEAWKGFSMLAFKNLAAFVKLSLASAIML 246

Query: 225 CLELWYYTAVILLVGCLRNPSIAVDAVSICMNLQLWTLMVALGFNVAVSVRVSNELGARE 46
           CLELWYYTAV++LVG L++  + VD +S+C+N QLWTLMVALGFN AVSVRVSNELGA  
Sbjct: 247 CLELWYYTAVLILVGLLKDAKLQVDVMSVCINYQLWTLMVALGFNAAVSVRVSNELGANR 306

Query: 45  PKAAKFSVVMAVSTS 1
           PKAAKF+V MAVSTS
Sbjct: 307 PKAAKFAVAMAVSTS 321


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