BLASTX nr result

ID: Coptis24_contig00036047 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00036047
         (273 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510601.1| tetracycline transporter, putative [Ricinus ...   130   8e-29
ref|XP_002306959.1| predicted protein [Populus trichocarpa] gi|2...   129   2e-28
ref|XP_003527649.1| PREDICTED: hippocampus abundant transcript-l...   127   9e-28
ref|XP_003523261.1| PREDICTED: hippocampus abundant transcript-l...   125   5e-27
ref|XP_002284761.1| PREDICTED: hippocampus abundant transcript 1...   124   1e-26

>ref|XP_002510601.1| tetracycline transporter, putative [Ricinus communis]
           gi|223551302|gb|EEF52788.1| tetracycline transporter,
           putative [Ricinus communis]
          Length = 442

 Score =  130 bits (328), Expect = 8e-29
 Identities = 61/91 (67%), Positives = 79/91 (86%)
 Frame = +1

Query: 1   SLTFTQAAVVAFFSSLAESGLQASLLFYLKAQFQFNKDQFADLMLIAGLAGAISQLLLMP 180
           S+TFTQAA+VAFF +L+E GL ASL++YLKA+F FNK+QFADLM+I+G+AG ISQLLLMP
Sbjct: 239 SVTFTQAAIVAFFINLSEVGLHASLMYYLKARFHFNKNQFADLMVISGIAGTISQLLLMP 298

Query: 181 MLAPCLDEVKLLRIGLFAACANIFLYSVSWS 273
           +LAP L E +LL +GLF  C ++FLYS++WS
Sbjct: 299 LLAPALGEARLLSVGLFFTCIHMFLYSIAWS 329


>ref|XP_002306959.1| predicted protein [Populus trichocarpa] gi|222856408|gb|EEE93955.1|
           predicted protein [Populus trichocarpa]
          Length = 447

 Score =  129 bits (325), Expect = 2e-28
 Identities = 61/91 (67%), Positives = 77/91 (84%)
 Frame = +1

Query: 1   SLTFTQAAVVAFFSSLAESGLQASLLFYLKAQFQFNKDQFADLMLIAGLAGAISQLLLMP 180
           S+T +QAAVVAFF SLAE GL ASLL+YLKA+F FNKDQFADLM+I G+AG +SQL+LMP
Sbjct: 244 SVTLSQAAVVAFFYSLAEVGLHASLLYYLKARFHFNKDQFADLMVITGIAGTLSQLVLMP 303

Query: 181 MLAPCLDEVKLLRIGLFAACANIFLYSVSWS 273
           +LAP L E +LL +GLF  C ++FLYS++W+
Sbjct: 304 ILAPALGEARLLAVGLFFTCVHVFLYSIAWT 334


>ref|XP_003527649.1| PREDICTED: hippocampus abundant transcript-like protein 1-like
           [Glycine max]
          Length = 432

 Score =  127 bits (319), Expect = 9e-28
 Identities = 60/91 (65%), Positives = 78/91 (85%)
 Frame = +1

Query: 1   SLTFTQAAVVAFFSSLAESGLQASLLFYLKAQFQFNKDQFADLMLIAGLAGAISQLLLMP 180
           SLT TQAA+VAFF+SLA+ GL  SLL++LKAQF F+K+QFADLM+I+G+AG +SQLLLMP
Sbjct: 240 SLTITQAAIVAFFNSLADVGLHGSLLYFLKAQFHFDKNQFADLMVISGIAGTVSQLLLMP 299

Query: 181 MLAPCLDEVKLLRIGLFAACANIFLYSVSWS 273
           +LAP L E +LL +GLF  C ++FLYS++WS
Sbjct: 300 ILAPILGEARLLSVGLFFHCIHMFLYSIAWS 330


>ref|XP_003523261.1| PREDICTED: hippocampus abundant transcript-like protein 1-like
           [Glycine max]
          Length = 432

 Score =  125 bits (313), Expect = 5e-27
 Identities = 59/91 (64%), Positives = 77/91 (84%)
 Frame = +1

Query: 1   SLTFTQAAVVAFFSSLAESGLQASLLFYLKAQFQFNKDQFADLMLIAGLAGAISQLLLMP 180
           SLT  QAA+VAFF+SLA+ GL  SLL++LKAQF F+K+QFADLM+I+G+AG +SQLLLMP
Sbjct: 240 SLTINQAAIVAFFNSLADVGLHGSLLYFLKAQFHFDKNQFADLMVISGIAGTVSQLLLMP 299

Query: 181 MLAPCLDEVKLLRIGLFAACANIFLYSVSWS 273
           +LAP L E +LL +GLF  C ++FLYS++WS
Sbjct: 300 ILAPILGETRLLSVGLFFHCVHMFLYSMAWS 330


>ref|XP_002284761.1| PREDICTED: hippocampus abundant transcript 1 protein [Vitis
           vinifera] gi|302141709|emb|CBI18912.3| unnamed protein
           product [Vitis vinifera]
          Length = 442

 Score =  124 bits (310), Expect = 1e-26
 Identities = 58/91 (63%), Positives = 77/91 (84%)
 Frame = +1

Query: 1   SLTFTQAAVVAFFSSLAESGLQASLLFYLKAQFQFNKDQFADLMLIAGLAGAISQLLLMP 180
           S TFT+AA+VAFFS+L + GL  SL++YLKA+F FNK QFADLM+I+G+AG ISQL+LMP
Sbjct: 239 SSTFTKAAIVAFFSNLGDVGLHTSLMYYLKARFHFNKHQFADLMMISGIAGTISQLVLMP 298

Query: 181 MLAPCLDEVKLLRIGLFAACANIFLYSVSWS 273
           +LAP + E KLL IGL  +C+++FLYS++WS
Sbjct: 299 ILAPTIGEEKLLAIGLLFSCSHMFLYSIAWS 329


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