BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00036036
         (315 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN67343.1| hypothetical protein VITISV_038220 [Vitis vinifera]    81   1e-13
ref|XP_003567531.1| PREDICTED: pentatricopeptide repeat-containi...    80   1e-13
emb|CBI21510.3| unnamed protein product [Vitis vinifera]               78   7e-13
ref|XP_002276001.1| PREDICTED: pentatricopeptide repeat-containi...    78   7e-13
ref|XP_004148468.1| PREDICTED: pentatricopeptide repeat-containi...    77   2e-12

>emb|CAN67343.1| hypothetical protein VITISV_038220 [Vitis vinifera]
          Length = 732

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 40/65 (61%), Positives = 49/65 (75%)
 Frame = -1

Query: 312 EAEKVRRRMDCSEVLKEPGNSWIEVNKAVHVFIAKDKSHNQAELIYSVLDKLTHLIKGVG 133
           + +KVR RMD SEV+KEPG SWIEVN  V+VFIA+  +H +A++I SVLD L   IKG G
Sbjct: 661 DVKKVRDRMDSSEVVKEPGRSWIEVNNKVNVFIARXTTHREADMIGSVLDILIQHIKGAG 720

Query: 132 KVPDA 118
            VPDA
Sbjct: 721 YVPDA 725


>ref|XP_003567531.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g39530-like [Brachypodium distachyon]
          Length = 822

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 35/66 (53%), Positives = 52/66 (78%)
 Frame = -1

Query: 312 EAEKVRRRMDCSEVLKEPGNSWIEVNKAVHVFIAKDKSHNQAELIYSVLDKLTHLIKGVG 133
           +A+K+R+ MDC+ V+KEPG SWIEV K VH FIA+ + H +A++IYS+LD+LT ++K  G
Sbjct: 739 DAQKLRQGMDCAGVVKEPGYSWIEVMKEVHTFIARGREHPEADVIYSLLDELTSILKNGG 798

Query: 132 KVPDAN 115
            +PD +
Sbjct: 799 YLPDTS 804


>emb|CBI21510.3| unnamed protein product [Vitis vinifera]
          Length = 746

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 41/65 (63%), Positives = 49/65 (75%)
 Frame = -1

Query: 312 EAEKVRRRMDCSEVLKEPGNSWIEVNKAVHVFIAKDKSHNQAELIYSVLDKLTHLIKGVG 133
           + +KVR RMD SEV+KEPG SWIEVN  V+VFIA+D +H +A+ I SVLD L   IKG G
Sbjct: 674 DVKKVRDRMDSSEVVKEPGRSWIEVNNKVNVFIARDTTHREAD-IGSVLDILIQHIKGAG 732

Query: 132 KVPDA 118
            VPDA
Sbjct: 733 YVPDA 737


>ref|XP_002276001.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g39530-like [Vitis vinifera]
          Length = 825

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 41/65 (63%), Positives = 49/65 (75%)
 Frame = -1

Query: 312 EAEKVRRRMDCSEVLKEPGNSWIEVNKAVHVFIAKDKSHNQAELIYSVLDKLTHLIKGVG 133
           + +KVR RMD SEV+KEPG SWIEVN  V+VFIA+D +H +A+ I SVLD L   IKG G
Sbjct: 753 DVKKVRDRMDSSEVVKEPGRSWIEVNNKVNVFIARDTTHREAD-IGSVLDILIQHIKGAG 811

Query: 132 KVPDA 118
            VPDA
Sbjct: 812 YVPDA 816


>ref|XP_004148468.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g39530-like [Cucumis sativus]
           gi|449515698|ref|XP_004164885.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At4g39530-like [Cucumis sativus]
          Length = 837

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 34/68 (50%), Positives = 50/68 (73%)
 Frame = -1

Query: 315 GEAEKVRRRMDCSEVLKEPGNSWIEVNKAVHVFIAKDKSHNQAELIYSVLDKLTHLIKGV 136
           G+ +++R +MD + V+KEPG SWIEVN  VH+F+++DK H++ +LIY  LD+LT  +K V
Sbjct: 765 GDVKRLRLKMDVNGVVKEPGQSWIEVNGEVHIFVSRDKVHDETDLIYLALDELTTQMKDV 824

Query: 135 GKVPDANI 112
           G V D  I
Sbjct: 825 GCVHDTTI 832