BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00036034
         (224 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAJ30047.1| conserved hypothetical protein [Magnetospirillum...   106   2e-21
ref|YP_005041088.1| hypothetical protein AZOLI_p50001 [Azospiril...    89   4e-20
ref|YP_005415571.1| hypothetical protein RSPPHO_03262, partial [...    94   9e-18
ref|YP_005040543.1| hypothetical protein AZOLI_p30001 [Azospiril...    89   4e-16
ref|ZP_02863228.1| conserved hypothetical protein [Clostridium b...    83   2e-14

>emb|CAJ30047.1| conserved hypothetical protein [Magnetospirillum gryphiswaldense
           MSR-1]
          Length = 149

 Score =  106 bits (265), Expect = 2e-21
 Identities = 52/73 (71%), Positives = 58/73 (79%)
 Frame = +3

Query: 6   CHSRSQAGLCHCTRQPMSDRPEPTIARLRYTLGGDRPSQTAHHAGSRSGLHRMRLDIRKI 185
           C   SQA LCHCTRQ +SD+ E TIARLRY+LGGDRPSQT HHAGSR+  H  RLD RK 
Sbjct: 47  CGPHSQASLCHCTRQLISDQLELTIARLRYSLGGDRPSQTTHHAGSRARFHGSRLDTRKQ 106

Query: 186 QGGISRMAPPELA 224
           +GGISRMAP +LA
Sbjct: 107 KGGISRMAPHQLA 119


>ref|YP_005041088.1| hypothetical protein AZOLI_p50001 [Azospirillum lipoferum 4B]
           gi|357428061|emb|CBS91011.1| conserved protein of
           unknown function [Azospirillum lipoferum 4B]
          Length = 113

 Score = 89.0 bits (219), Expect(2) = 4e-20
 Identities = 44/51 (86%), Positives = 44/51 (86%)
 Frame = +1

Query: 1   RTVILAVRRAYAIALDSRCPTGLSPPSRASVTLWEATAPVKLPTMQGPDPG 153
           R V LAVRRAYAIALD R PT LSPPSRASVTLWEATAPVKLP MQGP PG
Sbjct: 19  RLVSLAVRRAYAIALDERFPTALSPPSRASVTLWEATAPVKLPAMQGPGPG 69



 Score = 33.9 bits (76), Expect(2) = 4e-20
 Identities = 17/32 (53%), Positives = 19/32 (59%)
 Frame = +2

Query: 128 PPCRVPIRASPDAVRHQKNSGWYFKDGSTRAG 223
           P  + P   S   VR Q+  GWYFK GSTRAG
Sbjct: 61  PAMQGPGPGSRATVRCQRLQGWYFKVGSTRAG 92


>ref|YP_005415571.1| hypothetical protein RSPPHO_03262, partial [Rhodospirillum
           photometricum DSM 122] gi|378401485|emb|CCG06601.1|
           Putative uncharacterized protein, partial
           [Rhodospirillum photometricum DSM 122]
          Length = 104

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 42/49 (85%), Positives = 45/49 (91%)
 Frame = +3

Query: 3   NCHSRSQAGLCHCTRQPMSDRPEPTIARLRYTLGGDRPSQTAHHAGSRS 149
           N  SRSQAG CHCTRQP+SDRPEPTIARLRY+LGGDRPSQT HHAGSR+
Sbjct: 50  NRRSRSQAGFCHCTRQPISDRPEPTIARLRYSLGGDRPSQTTHHAGSRT 98


>ref|YP_005040543.1| hypothetical protein AZOLI_p30001 [Azospirillum lipoferum 4B]
           gi|357426923|emb|CBS89857.1| conserved protein of
           unknown function [Azospirillum lipoferum 4B]
          Length = 69

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 44/51 (86%), Positives = 44/51 (86%)
 Frame = +1

Query: 1   RTVILAVRRAYAIALDSRCPTGLSPPSRASVTLWEATAPVKLPTMQGPDPG 153
           R V LAVRRAYAIALD R PT LSPPSRASVTLWEATAPVKLP MQGP PG
Sbjct: 19  RLVSLAVRRAYAIALDERFPTALSPPSRASVTLWEATAPVKLPAMQGPGPG 69


>ref|ZP_02863228.1| conserved hypothetical protein [Clostridium botulinum C str.
           Eklund] gi|169294024|gb|EDS76157.1| conserved
           hypothetical protein [Clostridium botulinum C str.
           Eklund]
          Length = 182

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 41/72 (56%), Positives = 49/72 (68%)
 Frame = +3

Query: 6   CHSRSQAGLCHCTRQPMSDRPEPTIARLRYTLGGDRPSQTAHHAGSRSGLHRMRLDIRKI 185
           C  RSQA  C CT + +SDR E T  RLRY LGGDRPSQTAH A S   +H ++L+ +  
Sbjct: 23  CMCRSQAPFCLCTLRAISDRAEGTFGRLRYLLGGDRPSQTAHLAMSCDQIHGLQLEFQYY 82

Query: 186 QGGISRMAPPEL 221
           QGGI RM PP+L
Sbjct: 83  QGGIPRMTPPKL 94