BLASTX nr result

ID: Coptis24_contig00036025 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00036025
         (243 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI34537.3| unnamed protein product [Vitis vinifera]               91   1e-16
ref|XP_003532445.1| PREDICTED: uncharacterized protein LOC100786...    80   1e-13
ref|XP_002518858.1| hypothetical protein RCOM_1312210 [Ricinus c...    72   5e-11
ref|XP_002304329.1| predicted protein [Populus trichocarpa] gi|2...    72   6e-11
ref|XP_004166402.1| PREDICTED: uncharacterized LOC101209453 [Cuc...    70   2e-10

>emb|CBI34537.3| unnamed protein product [Vitis vinifera]
          Length = 148

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 45/76 (59%), Positives = 53/76 (69%)
 Frame = -2

Query: 236 KEKTTEWHALYXXXXXXXXXKYHDGILRLVVGLSHTKQVFLYDDSDKLLESRFLKKDEVV 57
           K   TEW ALY         KYHDG LRL +G S  +QV LYD S KLL+SRFLKKDEV+
Sbjct: 29  KSTVTEWQALYTTQITQKAKKYHDGFLRLSIGGSQGRQVMLYDASKKLLDSRFLKKDEVI 88

Query: 56  RCGETLTFEGYLVDIG 9
           R GE+LTF+ +LVD+G
Sbjct: 89  RSGESLTFDAHLVDVG 104


>ref|XP_003532445.1| PREDICTED: uncharacterized protein LOC100786754 [Glycine max]
          Length = 387

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 40/76 (52%), Positives = 50/76 (65%)
 Frame = -2

Query: 236 KEKTTEWHALYXXXXXXXXXKYHDGILRLVVGLSHTKQVFLYDDSDKLLESRFLKKDEVV 57
           K  T EW  LY         KYHDG LRLV+  S   QV L+D S KLL+SRFLKKD+V+
Sbjct: 43  KTSTEEWFVLYTTQVTQKAKKYHDGFLRLVLRGSSGVQVMLFDTSRKLLDSRFLKKDDVI 102

Query: 56  RCGETLTFEGYLVDIG 9
           + GE++ F+ YL+DIG
Sbjct: 103 KSGESIAFDSYLIDIG 118


>ref|XP_002518858.1| hypothetical protein RCOM_1312210 [Ricinus communis]
           gi|223541845|gb|EEF43391.1| hypothetical protein
           RCOM_1312210 [Ricinus communis]
          Length = 520

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 35/72 (48%), Positives = 46/72 (63%)
 Frame = -2

Query: 224 TEWHALYXXXXXXXXXKYHDGILRLVVGLSHTKQVFLYDDSDKLLESRFLKKDEVVRCGE 45
           TEW  +Y         KYHDG LRL    S  +Q+ LYD+  ++L+SRFL KDEV+R  E
Sbjct: 140 TEWRVMYTTQITQKAKKYHDGFLRLTSSGSFGRQIMLYDERREVLDSRFLTKDEVLRSHE 199

Query: 44  TLTFEGYLVDIG 9
           ++TF  +LVDIG
Sbjct: 200 SITFNAHLVDIG 211



 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 32/76 (42%), Positives = 40/76 (52%)
 Frame = -2

Query: 233 EKTTEWHALYXXXXXXXXXKYHDGILRLVVGLSHTKQVFLYDDSDKLLESRFLKKDEVVR 54
           E    W   Y          Y DG L   +    T +V L+DD +KLLE + LK +EVV 
Sbjct: 2   ESKKRWSVTYTKHMKQKRKVYQDGFLDHHIA---TNKVKLFDDCEKLLECKILKGEEVVS 58

Query: 53  CGETLTFEGYLVDIGN 6
             +TLTF GYLVDIG+
Sbjct: 59  SDQTLTFSGYLVDIGD 74



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 29/71 (40%), Positives = 37/71 (52%)
 Frame = -2

Query: 221 EWHALYXXXXXXXXXKYHDGILRLVVGLSHTKQVFLYDDSDKLLESRFLKKDEVVRCGET 42
           EWH LY         K+H+GILRL    S   QV L ++   +L S+FL   E VR G T
Sbjct: 255 EWHTLYTSQITQKAKKFHNGILRLTTSGSCRMQVTLLNEDKTILSSKFLNLSEDVRSGST 314

Query: 41  LTFEGYLVDIG 9
                YLV++G
Sbjct: 315 FVLPKYLVEVG 325


>ref|XP_002304329.1| predicted protein [Populus trichocarpa] gi|222841761|gb|EEE79308.1|
           predicted protein [Populus trichocarpa]
          Length = 543

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 35/75 (46%), Positives = 46/75 (61%)
 Frame = -2

Query: 233 EKTTEWHALYXXXXXXXXXKYHDGILRLVVGLSHTKQVFLYDDSDKLLESRFLKKDEVVR 54
           +  TEW  LY         KYHDG LRL    S   Q+ LYD S + L+ RFLKKDE++ 
Sbjct: 174 KSATEWQVLYTTQMTQKTKKYHDGFLRLASRESLGTQIMLYDASKRQLDCRFLKKDEIIS 233

Query: 53  CGETLTFEGYLVDIG 9
            GE+++F+ +LVDIG
Sbjct: 234 SGESISFDAHLVDIG 248



 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 31/79 (39%), Positives = 42/79 (53%)
 Frame = -2

Query: 242 EEKEKTTEWHALYXXXXXXXXXKYHDGILRLVVGLSHTKQVFLYDDSDKLLESRFLKKDE 63
           ++K+    W   Y          Y DG L L      T +V L+D+ +KLLE R LK +E
Sbjct: 7   KKKKNKQRWSVTYTKHIKQKRKIYQDGFLDLHFS---TNKVMLFDECEKLLECRILKDEE 63

Query: 62  VVRCGETLTFEGYLVDIGN 6
           VV   ETLTF  +LVD+G+
Sbjct: 64  VVSSSETLTFNSFLVDVGD 82


>ref|XP_004166402.1| PREDICTED: uncharacterized LOC101209453 [Cucumis sativus]
          Length = 394

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 34/76 (44%), Positives = 49/76 (64%)
 Frame = -2

Query: 236 KEKTTEWHALYXXXXXXXXXKYHDGILRLVVGLSHTKQVFLYDDSDKLLESRFLKKDEVV 57
           K + TEW  LY         K+HDG L+L +  S   QV L+D++ KLL+SRF+KK E V
Sbjct: 155 KTEETEWQVLYTTNITQKAKKFHDGFLKLSICGSLGSQVMLFDENRKLLDSRFIKKHETV 214

Query: 56  RCGETLTFEGYLVDIG 9
           + GE++ F+ +LV+IG
Sbjct: 215 KSGESIAFDAHLVEIG 230



 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 32/74 (43%), Positives = 39/74 (52%)
 Frame = -2

Query: 233 EKTTEWHALYXXXXXXXXXKYHDGILRLVVGLSHTKQVFLYDDSDKLLESRFLKKDEVVR 54
           E T  W   Y          YHDG L +    + T    LYD+ +KLLE R LK+DEV+ 
Sbjct: 3   EITNRWKVTYTKHLKQKRKVYHDGFLDIHRSSNKT---MLYDECEKLLECRMLKQDEVIC 59

Query: 53  CGETLTFEGYLVDI 12
            GETL F  +LVDI
Sbjct: 60  SGETLIFNSFLVDI 73


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