BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00036021
         (486 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002512377.1| conserved hypothetical protein [Ricinus comm...    70   2e-10
ref|XP_002884503.1| hypothetical protein ARALYDRAFT_896606 [Arab...    68   9e-10
gb|ABF84064.1| TANGLED [Arabidopsis thaliana]                          66   3e-09
emb|CAN81981.1| hypothetical protein VITISV_042629 [Vitis vinifera]    65   8e-09
ref|XP_002328563.1| predicted protein [Populus trichocarpa] gi|2...    64   1e-08

>ref|XP_002512377.1| conserved hypothetical protein [Ricinus communis]
           gi|223548338|gb|EEF49829.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 359

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 53/136 (38%), Positives = 71/136 (52%), Gaps = 2/136 (1%)
 Frame = +1

Query: 19  NSARHKVSCNCENPTVDTS*VLDQVTSIQFQISSQD*ESTYFFNILNKKSPKLSTVTKLR 198
           +S + +  C   +P + T+    Q T  +F I S    S   F +  K SP +S      
Sbjct: 238 DSTQQQKFCRTRSPVISTT---KQTTPHKFLIKSPP--SASKFQVKIKSSPVVS------ 286

Query: 199 RSFSPKPLSPTR-VNIVNKKCQKVSTATKLRRSLSPAKLASRFVSPLKNRMSA-QMGSGF 372
                  +SPTR  N   K   KVSTA+KLRRS SP++LA+R VSPLK R S+ Q   G 
Sbjct: 287 -------ISPTRPANFSKKLSPKVSTASKLRRSFSPSRLANRLVSPLKTRKSSVQKTDGL 339

Query: 373 MSGLKRCPSYNSMKFS 420
           MSGLK+ P+    +FS
Sbjct: 340 MSGLKQRPASMPRRFS 355


>ref|XP_002884503.1| hypothetical protein ARALYDRAFT_896606 [Arabidopsis lyrata subsp.
           lyrata] gi|297330343|gb|EFH60762.1| hypothetical protein
           ARALYDRAFT_896606 [Arabidopsis lyrata subsp. lyrata]
          Length = 481

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 54/129 (41%), Positives = 62/129 (48%), Gaps = 40/129 (31%)
 Frame = +1

Query: 154 LNKKSPKLSTVTKLRRSF-------------------------------------SPKPL 222
           L KKSPKLST  KLRRSF                                     SPK L
Sbjct: 353 LGKKSPKLSTAAKLRRSFTPTRNGSNLARKSSISPKRVTLQAFLSPTRNGNFCKTSPKAL 412

Query: 223 -SPTRVNIVNKKCQKVSTATKLRRSLSPAKLASRFVSPLKNRMSAQM--GSGFMSGLKRC 393
            SPTRVN    K QK+STA KLRRS SP++LA R VSP+K+R S         +SGLK+ 
Sbjct: 413 ISPTRVN----KSQKLSTAAKLRRSFSPSRLAMRLVSPMKSRKSVVKCDDHEMVSGLKQR 468

Query: 394 PSYNSMKFS 420
           P     +FS
Sbjct: 469 PVLVPKRFS 477


>gb|ABF84064.1| TANGLED [Arabidopsis thaliana]
          Length = 473

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 48/124 (38%), Positives = 60/124 (48%), Gaps = 37/124 (29%)
 Frame = +1

Query: 160 KKSPKLSTVTKLRRSFSP----------KPLSPTRVNI---------------------- 243
           K+SPKLST  KLRRSF+P            +SP RV +                      
Sbjct: 346 KRSPKLSTAAKLRRSFTPTRNGSNLARKSSISPKRVTLQAFLSPTRNGNFCKKSPKASIS 405

Query: 244 ---VNKKCQKVSTATKLRRSLSPAKLASRFVSPLKNRMSAQM--GSGFMSGLKRCPSYNS 408
              V  K QK+STA K RRS SP++LA RFVSP+K+R S         +SGLK+ P    
Sbjct: 406 PTRVCNKSQKLSTAAKFRRSFSPSRLAMRFVSPMKSRKSVAKCDDHEMVSGLKQRPVLVP 465

Query: 409 MKFS 420
            +FS
Sbjct: 466 KRFS 469



 Score = 47.4 bits (111), Expect(2) = 3e-07
 Identities = 27/44 (61%), Positives = 32/44 (72%), Gaps = 8/44 (18%)
 Frame = +2

Query: 32  TRSPVIARTR-------QWTPHKFLIKSPPSN-SKFQVKIKSPP 139
           T SPVIAR         + TP+KFLIKSPP++ SKFQVKI+SPP
Sbjct: 258 TMSPVIARNEISSIKNNKETPYKFLIKSPPTSASKFQVKIRSPP 301



 Score = 31.6 bits (70), Expect(2) = 3e-07
 Identities = 18/53 (33%), Positives = 27/53 (50%)
 Frame = +1

Query: 160 KKSPKLSTVTKLRRSFSPKPLSPTRVNIVNKKCQKVSTATKLRRSLSPAKLAS 318
           +KSP+ S       +   K  S + +    K+  K+STA KLRRS +P +  S
Sbjct: 316 RKSPRGSRSPTRTVNLGKKSASISPIRNTGKRSPKLSTAAKLRRSFTPTRNGS 368


>emb|CAN81981.1| hypothetical protein VITISV_042629 [Vitis vinifera]
          Length = 1239

 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 38/82 (46%), Positives = 51/82 (62%), Gaps = 3/82 (3%)
 Frame = +1

Query: 163  KSPKLSTVTKLRRSFSPKPLSPTRVNIVNKKCQ-KVSTATKLRRSLSPAKLASRFVSPLK 339
            KSP  ++ ++++    P  +SPTR   + KK   KVS A K RRS SP++LA+R VSPLK
Sbjct: 1144 KSPPSASKSQVKIKNLPVSISPTRSTALGKKSSPKVSAAVKFRRSFSPSRLANRLVSPLK 1203

Query: 340  NRMSAQMGSG--FMSGLKRCPS 399
            NR   Q   G   MSGLK+ P+
Sbjct: 1204 NRKCVQKSDGLMMMSGLKQRPA 1225



 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 28/38 (73%), Positives = 33/38 (86%)
 Frame = +2

Query: 32   TRSPVIARTRQWTPHKFLIKSPPSNSKFQVKIKSPPIS 145
            TRSPV+A+TR+  PHKFLIKSPPS SK QVKIK+ P+S
Sbjct: 1126 TRSPVLAKTRE-LPHKFLIKSPPSASKSQVKIKNLPVS 1162


>ref|XP_002328563.1| predicted protein [Populus trichocarpa] gi|222838278|gb|EEE76643.1|
           predicted protein [Populus trichocarpa]
          Length = 357

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 48/134 (35%), Positives = 65/134 (48%)
 Frame = +1

Query: 19  NSARHKVSCNCENPTVDTS*VLDQVTSIQFQISSQD*ESTYFFNILNKKSPKLSTVTKLR 198
           +SA+ +  C   +P +  +    Q T  +F I S    S   F +  K  P LS      
Sbjct: 237 DSAQQQKFCKTRSPVIARN--KKQTTPHKFLIKSPPSGSK--FQVKIKNPPVLS------ 286

Query: 199 RSFSPKPLSPTRVNIVNKKCQKVSTATKLRRSLSPAKLASRFVSPLKNRMSAQMGSGFMS 378
                  LSPTR   ++KK  K STA+K RRS SP++LA + +SPLK R   Q     MS
Sbjct: 287 -------LSPTRPTNLSKKSPKSSTASKFRRSFSPSRLAHKLMSPLKGRKIVQKSDVLMS 339

Query: 379 GLKRCPSYNSMKFS 420
           GLK+ P     +FS
Sbjct: 340 GLKQRPIATPRRFS 353