BLASTX nr result

ID: Coptis24_contig00036014 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00036014
         (227 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN68940.1| hypothetical protein VITISV_028995 [Vitis vinifera]    75   7e-12
ref|XP_002321027.1| predicted protein [Populus trichocarpa] gi|2...    73   3e-11
ref|XP_002520664.1| conserved hypothetical protein [Ricinus comm...    72   6e-11
ref|XP_002269678.2| PREDICTED: uncharacterized protein LOC100245...    71   8e-11
emb|CAN68941.1| hypothetical protein VITISV_028996 [Vitis vinifera]    71   8e-11

>emb|CAN68940.1| hypothetical protein VITISV_028995 [Vitis vinifera]
          Length = 379

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 32/75 (42%), Positives = 50/75 (66%)
 Frame = +2

Query: 2   LDFFNSIGISGPELAQIISMNPDILLKSLENKIIPSIAFLKGIFHTESDVITVLKHSKWV 181
           L+FF S+G SGP++A I+S NP IL + L+N +IP+  FLK +     +V+ VL+ + W+
Sbjct: 101 LEFFRSVGFSGPDIAGILSSNPYILKRGLQNNLIPTYTFLKSVVMVNENVVRVLRKTHWI 160

Query: 182 IYKDPQKRLAPNIAL 226
             +  QK + PNIA+
Sbjct: 161 TVQSVQKAITPNIAI 175


>ref|XP_002321027.1| predicted protein [Populus trichocarpa] gi|222861800|gb|EEE99342.1|
           predicted protein [Populus trichocarpa]
          Length = 400

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 32/75 (42%), Positives = 50/75 (66%)
 Frame = +2

Query: 2   LDFFNSIGISGPELAQIISMNPDILLKSLENKIIPSIAFLKGIFHTESDVITVLKHSKWV 181
           LDFF S+G+S P LA+ +S +P +L +SLEN+I+PS  FLK I  ++  +++  K + W+
Sbjct: 133 LDFFLSLGMSRPHLARTLSSDPTLLTRSLENQIVPSYNFLKTILRSDEKIVSAFKRTTWI 192

Query: 182 IYKDPQKRLAPNIAL 226
             +D  K L PN+ L
Sbjct: 193 FLEDLSKNLIPNLEL 207


>ref|XP_002520664.1| conserved hypothetical protein [Ricinus communis]
           gi|223540049|gb|EEF41626.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 406

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 34/75 (45%), Positives = 49/75 (65%)
 Frame = +2

Query: 2   LDFFNSIGISGPELAQIISMNPDILLKSLENKIIPSIAFLKGIFHTESDVITVLKHSKWV 181
           L+FF SIG S   LA+ +S +P +L +SLEN+IIPS  FLK I  ++  +++ LK + W+
Sbjct: 134 LEFFYSIGASNSALARALSSDPTLLTRSLENQIIPSYNFLKSILLSDEKIVSALKRTTWI 193

Query: 182 IYKDPQKRLAPNIAL 226
             +D  K L PNI L
Sbjct: 194 FLEDHSKNLIPNIEL 208


>ref|XP_002269678.2| PREDICTED: uncharacterized protein LOC100245941 [Vitis vinifera]
          Length = 352

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 32/75 (42%), Positives = 49/75 (65%)
 Frame = +2

Query: 2   LDFFNSIGISGPELAQIISMNPDILLKSLENKIIPSIAFLKGIFHTESDVITVLKHSKWV 181
           L+FF S+G SGP+LA I+  +P IL +SLEN +IPS  FLK +     +++   K + W+
Sbjct: 101 LEFFRSVGFSGPDLASIVVSSPIILRRSLENHVIPSYNFLKSVVMVNENIVRAFKKTFWI 160

Query: 182 IYKDPQKRLAPNIAL 226
             ++ Q  +APNIA+
Sbjct: 161 SGQNVQNAIAPNIAI 175


>emb|CAN68941.1| hypothetical protein VITISV_028996 [Vitis vinifera]
          Length = 2634

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 32/75 (42%), Positives = 49/75 (65%)
 Frame = +2

Query: 2   LDFFNSIGISGPELAQIISMNPDILLKSLENKIIPSIAFLKGIFHTESDVITVLKHSKWV 181
           L+FF S+G SGP+LA I+  +P IL +SLEN +IPS  FLK +     +++   K + W+
Sbjct: 601 LEFFRSVGFSGPDLASIVVSSPIILRRSLENHVIPSYNFLKSVVMVNENIVRAFKKTFWI 660

Query: 182 IYKDPQKRLAPNIAL 226
             ++ Q  +APNIA+
Sbjct: 661 SGQNVQNAIAPNIAI 675



 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 32/75 (42%), Positives = 47/75 (62%)
 Frame = +2

Query: 2    LDFFNSIGISGPELAQIISMNPDILLKSLENKIIPSIAFLKGIFHTESDVITVLKHSKWV 181
            L+FF S+G SGP+LA I++ +P IL +SLEN +IPS  FLK +      ++  L  S W+
Sbjct: 2356 LEFFRSVGFSGPDLASIVAASPQILRRSLENHVIPSYNFLKSVVIVNEKIVRALSKSYWL 2415

Query: 182  IYKDPQKRLAPNIAL 226
              +  Q  +APNI +
Sbjct: 2416 NGQTLQNTIAPNIEI 2430



 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 32/75 (42%), Positives = 46/75 (61%)
 Frame = +2

Query: 2    LDFFNSIGISGPELAQIISMNPDILLKSLENKIIPSIAFLKGIFHTESDVITVLKHSKWV 181
            L+FF S+G SG +LA I+   P IL +SLEN +IPS  FLK +     +++  L  S W+
Sbjct: 1336 LEFFCSVGFSGXDLASIVVAGPQILKRSLENHVIPSYNFLKSVLMVNENIVRALNKSYWL 1395

Query: 182  IYKDPQKRLAPNIAL 226
              +  Q  +APNIA+
Sbjct: 1396 HGQSLQNIMAPNIAI 1410



 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 30/75 (40%), Positives = 46/75 (61%)
 Frame = +2

Query: 2    LDFFNSIGISGPELAQIISMNPDILLKSLENKIIPSIAFLKGIFHTESDVITVLKHSKWV 181
            L+FF S+G SGP+LA I++ +P IL +SLEN +IPS  FLK +     +++  L  S W+
Sbjct: 974  LEFFRSVGFSGPDLASIVAASPQILRRSLENHVIPSYNFLKSVVMVNENIVRALNKSYWL 1033

Query: 182  IYKDPQKRLAPNIAL 226
              +     + PNI +
Sbjct: 1034 NGQSLPNIIVPNIEI 1048



 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 31/74 (41%), Positives = 44/74 (59%)
 Frame = +2

Query: 2    LDFFNSIGISGPELAQIISMNPDILLKSLENKIIPSIAFLKGIFHTESDVITVLKHSKWV 181
            L+FF S+G SGP+LA II   P IL +SLEN +IP+  FLK +     ++   L+ + W+
Sbjct: 1867 LEFFRSVGFSGPDLAGIIVAKPSILKRSLENHVIPNYNFLKSVGMINENIARALRRTYWL 1926

Query: 182  IYKDPQKRLAPNIA 223
              +  Q    PNIA
Sbjct: 1927 TGQSVQTTNVPNIA 1940



 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 29/75 (38%), Positives = 44/75 (58%)
 Frame = +2

Query: 2   LDFFNSIGISGPELAQIISMNPDILLKSLENKIIPSIAFLKGIFHTESDVITVLKHSKWV 181
           L+FF S G SGP+L +I+  +P IL +SLEN +IPS  FLK +     +++     S W+
Sbjct: 120 LEFFXSAGFSGPDLVRIVVGSPSILKRSLENHLIPSYNFLKSMDMVHENIVKAFSRSYWL 179

Query: 182 IYKDPQKRLAPNIAL 226
             K  Q  +A N+ +
Sbjct: 180 TGKSVQDTIASNVEI 194


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