BLASTX nr result

ID: Coptis24_contig00036012 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00036012
         (398 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADP20179.1| gag-pol polyprotein [Silene latifolia]                 177   6e-43
ref|XP_003556952.1| PREDICTED: uncharacterized protein LOC100792...   177   8e-43
ref|XP_003530517.1| PREDICTED: uncharacterized protein LOC100800...   177   8e-43
gb|ADP20178.1| gag-pol polyprotein [Silene latifolia]                 177   8e-43
emb|CAN79321.1| hypothetical protein VITISV_018984 [Vitis vinifera]   175   4e-42

>gb|ADP20179.1| gag-pol polyprotein [Silene latifolia]
          Length = 1475

 Score =  177 bits (450), Expect = 6e-43
 Identities = 83/126 (65%), Positives = 100/126 (79%)
 Frame = -3

Query: 378  VYEWSVMPFSLSNAPSTFMRLMTQVLKPYLNKFCVVYFDDILIYSSSESEHLQHIELLLG 199
            +YEW VMPF LSNAPSTFMRLMT+VL+PYL +F VVYFDDIL+YS S+ EHL+H+++L  
Sbjct: 720  LYEWLVMPFGLSNAPSTFMRLMTEVLRPYLGRFVVVYFDDILVYSPSKEEHLKHLQVLFE 779

Query: 198  VLRTEKLYLQLKKCSFMVDSVVFLGFVVSANGIRVDDSKV*AIIEWPVPSTVTQVRSFHG 19
             LR  KLY +L+KCSFM + V FLGF++S  GI VD  KV AI  WP+P  +T VRSFHG
Sbjct: 780  TLREHKLYGKLEKCSFMQNEVQFLGFIISDRGILVDQEKVKAIKSWPIPKNITDVRSFHG 839

Query: 18   LASFYR 1
            LASFYR
Sbjct: 840  LASFYR 845


>ref|XP_003556952.1| PREDICTED: uncharacterized protein LOC100792366, partial [Glycine
            max]
          Length = 871

 Score =  177 bits (449), Expect = 8e-43
 Identities = 85/126 (67%), Positives = 100/126 (79%)
 Frame = -3

Query: 378  VYEWSVMPFSLSNAPSTFMRLMTQVLKPYLNKFCVVYFDDILIYSSSESEHLQHIELLLG 199
            +YEW VMPF L+NAPSTFMRLM  VL+ ++ KF VVYFDDILIYS+S   H+QH++ +L 
Sbjct: 746  LYEWMVMPFGLTNAPSTFMRLMNHVLREFIGKFVVVYFDDILIYSTSLDLHVQHLQSVLS 805

Query: 198  VLRTEKLYLQLKKCSFMVDSVVFLGFVVSANGIRVDDSKV*AIIEWPVPSTVTQVRSFHG 19
            VLR EKLY  L+KCSF  D VVFLGFVVSA G+RVD  KV AI EWP P T+++VR FHG
Sbjct: 806  VLRKEKLYANLEKCSFCTDHVVFLGFVVSAEGVRVDVEKVKAIQEWPTPKTLSEVRGFHG 865

Query: 18   LASFYR 1
            LASFYR
Sbjct: 866  LASFYR 871


>ref|XP_003530517.1| PREDICTED: uncharacterized protein LOC100800881 [Glycine max]
          Length = 1746

 Score =  177 bits (449), Expect = 8e-43
 Identities = 85/126 (67%), Positives = 100/126 (79%)
 Frame = -3

Query: 378  VYEWSVMPFSLSNAPSTFMRLMTQVLKPYLNKFCVVYFDDILIYSSSESEHLQHIELLLG 199
            +YEW VMPF L+NAPSTFMRLM  VL+ ++ KF VVYFDDILIYS+S   H+QH++ +L 
Sbjct: 763  LYEWMVMPFGLTNAPSTFMRLMNHVLREFIGKFVVVYFDDILIYSTSLDLHVQHLQSVLS 822

Query: 198  VLRTEKLYLQLKKCSFMVDSVVFLGFVVSANGIRVDDSKV*AIIEWPVPSTVTQVRSFHG 19
            VLR EKLY  L+KCSF  D VVFLGFVVSA G+RVD  KV AI EWP P T+++VR FHG
Sbjct: 823  VLRKEKLYANLEKCSFCTDHVVFLGFVVSAEGVRVDVEKVKAIQEWPTPKTLSEVRGFHG 882

Query: 18   LASFYR 1
            LASFYR
Sbjct: 883  LASFYR 888


>gb|ADP20178.1| gag-pol polyprotein [Silene latifolia]
          Length = 1518

 Score =  177 bits (449), Expect = 8e-43
 Identities = 80/126 (63%), Positives = 103/126 (81%)
 Frame = -3

Query: 378  VYEWSVMPFSLSNAPSTFMRLMTQVLKPYLNKFCVVYFDDILIYSSSESEHLQHIELLLG 199
            +YEW VMPF LSNAPSTFMRLMT+VL+P L KF VVYFDDIL+YS ++ EHL+H+E++  
Sbjct: 732  LYEWLVMPFGLSNAPSTFMRLMTEVLRPCLGKFAVVYFDDILVYSKTKGEHLKHLEVVFK 791

Query: 198  VLRTEKLYLQLKKCSFMVDSVVFLGFVVSANGIRVDDSKV*AIIEWPVPSTVTQVRSFHG 19
            +LR +KLY +L+KC+FMV+ V FLG+++S  GI VD   + A+  WP P+TVT+VRSFHG
Sbjct: 792  ILREQKLYGKLEKCTFMVEEVAFLGYLISGRGISVDQENIAAMQSWPTPTTVTEVRSFHG 851

Query: 18   LASFYR 1
            LASFYR
Sbjct: 852  LASFYR 857


>emb|CAN79321.1| hypothetical protein VITISV_018984 [Vitis vinifera]
          Length = 1521

 Score =  175 bits (443), Expect = 4e-42
 Identities = 78/126 (61%), Positives = 102/126 (80%)
 Frame = -3

Query: 378  VYEWSVMPFSLSNAPSTFMRLMTQVLKPYLNKFCVVYFDDILIYSSSESEHLQHIELLLG 199
            +YEW VMPF L+NAPSTFMR+MTQVLKP++ +F VVYFDDILIYS S  +H +H++ ++ 
Sbjct: 739  LYEWLVMPFGLTNAPSTFMRIMTQVLKPFIGRFVVVYFDDILIYSRSCEDHEEHLKQVMR 798

Query: 198  VLRTEKLYLQLKKCSFMVDSVVFLGFVVSANGIRVDDSKV*AIIEWPVPSTVTQVRSFHG 19
             LR EK Y+ LKKC+FM  SVVFLGFVVS+ G+  D  K+ AI++WPVP+ + +VRSFHG
Sbjct: 799  TLRAEKFYINLKKCTFMSPSVVFLGFVVSSKGVETDPEKIKAIVDWPVPTNIHEVRSFHG 858

Query: 18   LASFYR 1
            +A+FYR
Sbjct: 859  MATFYR 864


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