BLASTX nr result

ID: Coptis24_contig00036006 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00036006
         (229 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21960.3| unnamed protein product [Vitis vinifera]               83   3e-14
ref|XP_002276308.1| PREDICTED: 1-aminocyclopropane-1-carboxylate...    83   3e-14
ref|XP_003633274.1| PREDICTED: LOW QUALITY PROTEIN: 1-aminocyclo...    80   2e-13
emb|CAN82828.1| hypothetical protein VITISV_043897 [Vitis vinifera]    80   2e-13
ref|XP_002276339.1| PREDICTED: 1-aminocyclopropane-1-carboxylate...    77   1e-12

>emb|CBI21960.3| unnamed protein product [Vitis vinifera]
          Length = 678

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 35/76 (46%), Positives = 54/76 (71%)
 Frame = -2

Query: 228 VPKIFIRPSNELDRKSDSDLTHFQIPIIDLQGIKDDKGMQQVIVKEILSASEKWGFFLVV 49
           +P +FI P    D KS+S ++ F++P+IDL G+KD+  ++  I+ ++  A E WGFF VV
Sbjct: 37  IPLMFIHPRYNPDAKSESAVSQFRVPLIDLDGVKDNATVRAKIIDQVRGACENWGFFQVV 96

Query: 48  NHGVPSSVMEGMIKGV 1
           NHG+P+SV+E MI G+
Sbjct: 97  NHGIPASVLEEMIDGI 112



 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 32/76 (42%), Positives = 51/76 (67%)
 Frame = -2

Query: 228 VPKIFIRPSNELDRKSDSDLTHFQIPIIDLQGIKDDKGMQQVIVKEILSASEKWGFFLVV 49
           +P +FI P    D KS S ++ F++P+IDL G+ D+  ++  I+ ++  A E WGF  VV
Sbjct: 362 IPLMFIHPHYNPDAKSGSAVSQFRVPLIDLDGVNDNATLRAKIIDQVREACENWGFLQVV 421

Query: 48  NHGVPSSVMEGMIKGV 1
           NHG+P+SV+E M+ G+
Sbjct: 422 NHGIPASVLEEMLDGI 437


>ref|XP_002276308.1| PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog 1
           [Vitis vinifera]
          Length = 353

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 35/76 (46%), Positives = 54/76 (71%)
 Frame = -2

Query: 228 VPKIFIRPSNELDRKSDSDLTHFQIPIIDLQGIKDDKGMQQVIVKEILSASEKWGFFLVV 49
           +P +FI P    D KS+S ++ F++P+IDL G+KD+  ++  I+ ++  A E WGFF VV
Sbjct: 37  IPLMFIHPRYNPDAKSESAVSQFRVPLIDLDGVKDNATVRAKIIDQVRGACENWGFFQVV 96

Query: 48  NHGVPSSVMEGMIKGV 1
           NHG+P+SV+E MI G+
Sbjct: 97  NHGIPASVLEEMIDGI 112


>ref|XP_003633274.1| PREDICTED: LOW QUALITY PROTEIN: 1-aminocyclopropane-1-carboxylate
           oxidase homolog 1-like [Vitis vinifera]
          Length = 369

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 33/76 (43%), Positives = 51/76 (67%)
 Frame = -2

Query: 228 VPKIFIRPSNELDRKSDSDLTHFQIPIIDLQGIKDDKGMQQVIVKEILSASEKWGFFLVV 49
           +P +FI P   L+ KS S ++ F++P++DL GI D   ++  I+ ++  A E WGFF  V
Sbjct: 39  IPPMFIHPQYNLNAKSGSAVSQFRVPLVDLDGINDSATLRAKIIDQVREACENWGFFQAV 98

Query: 48  NHGVPSSVMEGMIKGV 1
           NHG+P+SV+E MI G+
Sbjct: 99  NHGIPASVLEEMIDGI 114


>emb|CAN82828.1| hypothetical protein VITISV_043897 [Vitis vinifera]
          Length = 740

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 33/76 (43%), Positives = 51/76 (67%)
 Frame = -2

Query: 228 VPKIFIRPSNELDRKSDSDLTHFQIPIIDLQGIKDDKGMQQVIVKEILSASEKWGFFLVV 49
           +P +FI P   L+ KS S ++ F++P++DL GI D   ++  I+ ++  A E WGFF  V
Sbjct: 422 IPPMFIHPQYNLNAKSGSAVSQFRVPLVDLDGINDSATLRAKIIDQVREACENWGFFQAV 481

Query: 48  NHGVPSSVMEGMIKGV 1
           NHG+P+SV+E MI G+
Sbjct: 482 NHGIPASVLEEMIDGI 497



 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 32/76 (42%), Positives = 51/76 (67%)
 Frame = -2

Query: 228 VPKIFIRPSNELDRKSDSDLTHFQIPIIDLQGIKDDKGMQQVIVKEILSASEKWGFFLVV 49
           +P +FI P    D KS S ++ F++P+IDL G+ D+  ++  I+ ++  A E WGF  VV
Sbjct: 84  IPLMFIHPHYNPDAKSGSAVSQFRVPLIDLDGVNDNATLRAKIIDQVREACENWGFLQVV 143

Query: 48  NHGVPSSVMEGMIKGV 1
           NHG+P+SV+E M+ G+
Sbjct: 144 NHGIPASVLEEMLDGI 159


>ref|XP_002276339.1| PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog 1
           [Vitis vinifera]
          Length = 355

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 32/76 (42%), Positives = 51/76 (67%)
 Frame = -2

Query: 228 VPKIFIRPSNELDRKSDSDLTHFQIPIIDLQGIKDDKGMQQVIVKEILSASEKWGFFLVV 49
           +P +FI P    D KS S ++ F++P+IDL G+ D+  ++  I+ ++  A E WGF  VV
Sbjct: 39  IPLMFIHPHYNPDAKSGSAVSQFRVPLIDLDGVNDNATLRAKIIDQVREACENWGFLQVV 98

Query: 48  NHGVPSSVMEGMIKGV 1
           NHG+P+SV+E M+ G+
Sbjct: 99  NHGIPASVLEEMLDGI 114


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