BLASTX nr result

ID: Coptis24_contig00035999 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00035999
         (536 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN66783.1| hypothetical protein VITISV_013510 [Vitis vinifera]   157   9e-37
ref|XP_002304279.1| mtn21-like protein [Populus trichocarpa] gi|...   149   2e-34
ref|XP_002326644.1| mtn21-like protein [Populus trichocarpa] gi|...   149   3e-34
gb|ABD65007.1| integral membrane protein, putative [Brassica ole...   148   6e-34
gb|AFK40368.1| unknown [Lotus japonicus]                              146   2e-33

>emb|CAN66783.1| hypothetical protein VITISV_013510 [Vitis vinifera]
          Length = 829

 Score =  157 bits (397), Expect = 9e-37
 Identities = 89/188 (47%), Positives = 115/188 (61%), Gaps = 11/188 (5%)
 Frame = +3

Query: 6   MPNLAPGFIFIIASVVRFEKVDLKCFYSWVKIMGTMLCIVGAILMXXXXXXXXXXTPLKT 185
           MPNLAPG IFIIA   R EKV++ C YS VKI+GT+LC+VGA++M          + L  
Sbjct: 89  MPNLAPGLIFIIACSFRLEKVNISCMYSQVKIIGTLLCVVGAVVMSLLHSTTEKSSKLSE 148

Query: 186 ASNMETFNQDRIIGTVCLLAG-----------AITLRDFPAPTSLNAITSIVGAVLTFFL 332
                 FN+++I+G + LLA            A TL DFPAP SL AITSI+G  LT  +
Sbjct: 149 I----IFNEEKIVGCLYLLAAVFTLSSNVVLQATTLVDFPAPISLCAITSIIGVFLTMIV 204

Query: 333 QLIIEHGLEIGPPYVSARKLVGYALLGGVVPGAYGSFQASAMKKKGPVFVSTVSPIGTIF 512
           + +  H  + G P +S R +V Y+LLGG V G   SF   AMKK+GPV VS  SPIGT+ 
Sbjct: 205 EFLQNHKFDTGWPNLSLRDIVFYSLLGGSVSGLCVSFNGWAMKKRGPVLVSMFSPIGTVC 264

Query: 513 SVVISALT 536
           SV++S +T
Sbjct: 265 SVILSVMT 272


>ref|XP_002304279.1| mtn21-like protein [Populus trichocarpa]
           gi|222841711|gb|EEE79258.1| mtn21-like protein [Populus
           trichocarpa]
          Length = 352

 Score =  149 bits (377), Expect = 2e-34
 Identities = 84/191 (43%), Positives = 117/191 (61%), Gaps = 14/191 (7%)
 Frame = +3

Query: 6   MPNLAPGFIFIIASVVRFEKVDLKCFYSWVKIMGTMLCIVGAILMXXXXXXXXXXTPLKT 185
           MPNLAPG IFIIA  +R EKV L C YS VKI+GT+LC+VGA++M              +
Sbjct: 112 MPNLAPGLIFIIAWTLRLEKVKLCCVYSKVKIVGTILCVVGALMMSLMSSTESAKESKSS 171

Query: 186 ASNME---TFNQDRIIGTVCLLAG-----------AITLRDFPAPTSLNAITSIVGAVLT 323
            S      +F++ +I G + L+A            A TL DFPAP SL AITS++G ++T
Sbjct: 172 ESTPPGDMSFDKHKINGCLYLIAAVFVLSSNVVLQATTLGDFPAPISLCAITSLIGVIIT 231

Query: 324 FFLQLIIEHGLEIGPPYVSARKLVGYALLGGVVPGAYGSFQASAMKKKGPVFVSTVSPIG 503
             ++L++ H +++G P +    L+ Y++LGG V GA  SF   AMKK+GPV V+  +PIG
Sbjct: 232 AIVELVLNHRVDVGWPLMRLGTLICYSILGGAVGGACVSFNGWAMKKRGPVHVAVFNPIG 291

Query: 504 TIFSVVISALT 536
           T+ SVV S +T
Sbjct: 292 TVISVVFSVIT 302


>ref|XP_002326644.1| mtn21-like protein [Populus trichocarpa]
           gi|222833966|gb|EEE72443.1| mtn21-like protein [Populus
           trichocarpa]
          Length = 327

 Score =  149 bits (375), Expect = 3e-34
 Identities = 90/190 (47%), Positives = 114/190 (60%), Gaps = 14/190 (7%)
 Frame = +3

Query: 6   MPNLAPGFIFIIASVVRFEKVDLKCFYSWVKIMGTMLCIVGAILMXXXXXXXXXXTPLKT 185
           MPNLAPG IFIIA  +R E+V L C YS VKI GT+LC+VGA++M          T  K 
Sbjct: 90  MPNLAPGIIFIIAWTLRLERVKLSCIYSKVKIGGTLLCVVGALIMSLMSSTG---TAKKF 146

Query: 186 ASNMET---FNQDRIIGTVCLLAG-----------AITLRDFPAPTSLNAITSIVGAVLT 323
           +SN  T   F+  +IIG + L+A            A TL DFPAP SL AITS++G V+T
Sbjct: 147 SSNPPTADMFDVHKIIGCLYLMAAVFVLSSNVVLQATTLVDFPAPMSLCAITSLIGVVIT 206

Query: 324 FFLQLIIEHGLEIGPPYVSARKLVGYALLGGVVPGAYGSFQASAMKKKGPVFVSTVSPIG 503
             +QLI  H ++ G P V    L+ Y++LGG + G   SF   AMKK+GPV VS  SPI 
Sbjct: 207 ATVQLIQNHKVDFGWPVVRLGDLICYSVLGGAIGGVCVSFNGWAMKKRGPVLVSVFSPIA 266

Query: 504 TIFSVVISAL 533
           T+ SVV S +
Sbjct: 267 TVISVVFSVI 276


>gb|ABD65007.1| integral membrane protein, putative [Brassica oleracea]
          Length = 376

 Score =  148 bits (373), Expect = 6e-34
 Identities = 86/189 (45%), Positives = 116/189 (61%), Gaps = 12/189 (6%)
 Frame = +3

Query: 6   MPNLAPGFIFIIASVVRFEKVDLKCFYSWVKIMGTMLCIVGAILMXXXXXXXXXXTPLKT 185
           MPNLAPG IF IA +VR EK+D+KC YS +KI+GT+LC+ GA+ M               
Sbjct: 139 MPNLAPGLIFFIAWMVRLEKMDMKCVYSKLKILGTLLCVFGALTMSLMHSASIIQDEKDN 198

Query: 186 ASNMETFNQDRIIGTVCLLAG-----------AITLRDFPAPTSLNAITSIVGAVLTFFL 332
           AS +  F++DR++G + LL             A TL +FPAP SL+AITS++G V+T  L
Sbjct: 199 AS-IFVFDRDRVVGCMYLLGAVFILSSNVVLQASTLAEFPAPISLSAITSLIGVVITTML 257

Query: 333 QLIIEHGLE-IGPPYVSARKLVGYALLGGVVPGAYGSFQASAMKKKGPVFVSTVSPIGTI 509
           QL+     + +    +S   LVG++LLGG+V GA  SF   AMKK+GPV VS  SPI T+
Sbjct: 258 QLLQNPNTKVVTRSLISISNLVGFSLLGGMVSGACVSFNGWAMKKRGPVMVSMFSPIATV 317

Query: 510 FSVVISALT 536
            SV +S +T
Sbjct: 318 ISVGLSVVT 326


>gb|AFK40368.1| unknown [Lotus japonicus]
          Length = 352

 Score =  146 bits (369), Expect = 2e-33
 Identities = 89/197 (45%), Positives = 110/197 (55%), Gaps = 20/197 (10%)
 Frame = +3

Query: 6   MPNLAPGFIFIIASVVRFEKVDLKCFYSWVKIMGTMLCIVGAILMXXXXXXXXXXTPLKT 185
           MPNLAPG IFIIA + R EKVDL+C YS VKI+GT+LC+VGA+ M           P+K 
Sbjct: 112 MPNLAPGLIFIIAWIFRMEKVDLRCTYSRVKIIGTLLCVVGAVAMSMMQSLSTS-VPIKE 170

Query: 186 AS---------NMETFNQDRIIGTVCLLAG-----------AITLRDFPAPTSLNAITSI 305
            +          + TF++D+I G + LL             A TL DFPAP SL  ITS 
Sbjct: 171 GTVTVQLASPPPVLTFDRDKIFGCIYLLVAIIILSSSIVLQAFTLGDFPAPMSLCVITSF 230

Query: 306 VGAVLTFFLQLIIEHGLEIGPPYVSARKLVGYALLGGVVPGAYGSFQASAMKKKGPVFVS 485
           +   L    QL+ +H    G P VS   +VGY  L G V G   SF   A++K+GPV VS
Sbjct: 231 LAGSLAAVAQLVEDHQFSTGWPIVSVGDMVGYGFLSGAVSGICLSFNGWALEKRGPVLVS 290

Query: 486 TVSPIGTIFSVVISALT 536
             SPIGT+ SVV SA T
Sbjct: 291 MFSPIGTVCSVVFSAFT 307