BLASTX nr result
ID: Coptis24_contig00035999
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00035999 (536 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAN66783.1| hypothetical protein VITISV_013510 [Vitis vinifera] 157 9e-37 ref|XP_002304279.1| mtn21-like protein [Populus trichocarpa] gi|... 149 2e-34 ref|XP_002326644.1| mtn21-like protein [Populus trichocarpa] gi|... 149 3e-34 gb|ABD65007.1| integral membrane protein, putative [Brassica ole... 148 6e-34 gb|AFK40368.1| unknown [Lotus japonicus] 146 2e-33 >emb|CAN66783.1| hypothetical protein VITISV_013510 [Vitis vinifera] Length = 829 Score = 157 bits (397), Expect = 9e-37 Identities = 89/188 (47%), Positives = 115/188 (61%), Gaps = 11/188 (5%) Frame = +3 Query: 6 MPNLAPGFIFIIASVVRFEKVDLKCFYSWVKIMGTMLCIVGAILMXXXXXXXXXXTPLKT 185 MPNLAPG IFIIA R EKV++ C YS VKI+GT+LC+VGA++M + L Sbjct: 89 MPNLAPGLIFIIACSFRLEKVNISCMYSQVKIIGTLLCVVGAVVMSLLHSTTEKSSKLSE 148 Query: 186 ASNMETFNQDRIIGTVCLLAG-----------AITLRDFPAPTSLNAITSIVGAVLTFFL 332 FN+++I+G + LLA A TL DFPAP SL AITSI+G LT + Sbjct: 149 I----IFNEEKIVGCLYLLAAVFTLSSNVVLQATTLVDFPAPISLCAITSIIGVFLTMIV 204 Query: 333 QLIIEHGLEIGPPYVSARKLVGYALLGGVVPGAYGSFQASAMKKKGPVFVSTVSPIGTIF 512 + + H + G P +S R +V Y+LLGG V G SF AMKK+GPV VS SPIGT+ Sbjct: 205 EFLQNHKFDTGWPNLSLRDIVFYSLLGGSVSGLCVSFNGWAMKKRGPVLVSMFSPIGTVC 264 Query: 513 SVVISALT 536 SV++S +T Sbjct: 265 SVILSVMT 272 >ref|XP_002304279.1| mtn21-like protein [Populus trichocarpa] gi|222841711|gb|EEE79258.1| mtn21-like protein [Populus trichocarpa] Length = 352 Score = 149 bits (377), Expect = 2e-34 Identities = 84/191 (43%), Positives = 117/191 (61%), Gaps = 14/191 (7%) Frame = +3 Query: 6 MPNLAPGFIFIIASVVRFEKVDLKCFYSWVKIMGTMLCIVGAILMXXXXXXXXXXTPLKT 185 MPNLAPG IFIIA +R EKV L C YS VKI+GT+LC+VGA++M + Sbjct: 112 MPNLAPGLIFIIAWTLRLEKVKLCCVYSKVKIVGTILCVVGALMMSLMSSTESAKESKSS 171 Query: 186 ASNME---TFNQDRIIGTVCLLAG-----------AITLRDFPAPTSLNAITSIVGAVLT 323 S +F++ +I G + L+A A TL DFPAP SL AITS++G ++T Sbjct: 172 ESTPPGDMSFDKHKINGCLYLIAAVFVLSSNVVLQATTLGDFPAPISLCAITSLIGVIIT 231 Query: 324 FFLQLIIEHGLEIGPPYVSARKLVGYALLGGVVPGAYGSFQASAMKKKGPVFVSTVSPIG 503 ++L++ H +++G P + L+ Y++LGG V GA SF AMKK+GPV V+ +PIG Sbjct: 232 AIVELVLNHRVDVGWPLMRLGTLICYSILGGAVGGACVSFNGWAMKKRGPVHVAVFNPIG 291 Query: 504 TIFSVVISALT 536 T+ SVV S +T Sbjct: 292 TVISVVFSVIT 302 >ref|XP_002326644.1| mtn21-like protein [Populus trichocarpa] gi|222833966|gb|EEE72443.1| mtn21-like protein [Populus trichocarpa] Length = 327 Score = 149 bits (375), Expect = 3e-34 Identities = 90/190 (47%), Positives = 114/190 (60%), Gaps = 14/190 (7%) Frame = +3 Query: 6 MPNLAPGFIFIIASVVRFEKVDLKCFYSWVKIMGTMLCIVGAILMXXXXXXXXXXTPLKT 185 MPNLAPG IFIIA +R E+V L C YS VKI GT+LC+VGA++M T K Sbjct: 90 MPNLAPGIIFIIAWTLRLERVKLSCIYSKVKIGGTLLCVVGALIMSLMSSTG---TAKKF 146 Query: 186 ASNMET---FNQDRIIGTVCLLAG-----------AITLRDFPAPTSLNAITSIVGAVLT 323 +SN T F+ +IIG + L+A A TL DFPAP SL AITS++G V+T Sbjct: 147 SSNPPTADMFDVHKIIGCLYLMAAVFVLSSNVVLQATTLVDFPAPMSLCAITSLIGVVIT 206 Query: 324 FFLQLIIEHGLEIGPPYVSARKLVGYALLGGVVPGAYGSFQASAMKKKGPVFVSTVSPIG 503 +QLI H ++ G P V L+ Y++LGG + G SF AMKK+GPV VS SPI Sbjct: 207 ATVQLIQNHKVDFGWPVVRLGDLICYSVLGGAIGGVCVSFNGWAMKKRGPVLVSVFSPIA 266 Query: 504 TIFSVVISAL 533 T+ SVV S + Sbjct: 267 TVISVVFSVI 276 >gb|ABD65007.1| integral membrane protein, putative [Brassica oleracea] Length = 376 Score = 148 bits (373), Expect = 6e-34 Identities = 86/189 (45%), Positives = 116/189 (61%), Gaps = 12/189 (6%) Frame = +3 Query: 6 MPNLAPGFIFIIASVVRFEKVDLKCFYSWVKIMGTMLCIVGAILMXXXXXXXXXXTPLKT 185 MPNLAPG IF IA +VR EK+D+KC YS +KI+GT+LC+ GA+ M Sbjct: 139 MPNLAPGLIFFIAWMVRLEKMDMKCVYSKLKILGTLLCVFGALTMSLMHSASIIQDEKDN 198 Query: 186 ASNMETFNQDRIIGTVCLLAG-----------AITLRDFPAPTSLNAITSIVGAVLTFFL 332 AS + F++DR++G + LL A TL +FPAP SL+AITS++G V+T L Sbjct: 199 AS-IFVFDRDRVVGCMYLLGAVFILSSNVVLQASTLAEFPAPISLSAITSLIGVVITTML 257 Query: 333 QLIIEHGLE-IGPPYVSARKLVGYALLGGVVPGAYGSFQASAMKKKGPVFVSTVSPIGTI 509 QL+ + + +S LVG++LLGG+V GA SF AMKK+GPV VS SPI T+ Sbjct: 258 QLLQNPNTKVVTRSLISISNLVGFSLLGGMVSGACVSFNGWAMKKRGPVMVSMFSPIATV 317 Query: 510 FSVVISALT 536 SV +S +T Sbjct: 318 ISVGLSVVT 326 >gb|AFK40368.1| unknown [Lotus japonicus] Length = 352 Score = 146 bits (369), Expect = 2e-33 Identities = 89/197 (45%), Positives = 110/197 (55%), Gaps = 20/197 (10%) Frame = +3 Query: 6 MPNLAPGFIFIIASVVRFEKVDLKCFYSWVKIMGTMLCIVGAILMXXXXXXXXXXTPLKT 185 MPNLAPG IFIIA + R EKVDL+C YS VKI+GT+LC+VGA+ M P+K Sbjct: 112 MPNLAPGLIFIIAWIFRMEKVDLRCTYSRVKIIGTLLCVVGAVAMSMMQSLSTS-VPIKE 170 Query: 186 AS---------NMETFNQDRIIGTVCLLAG-----------AITLRDFPAPTSLNAITSI 305 + + TF++D+I G + LL A TL DFPAP SL ITS Sbjct: 171 GTVTVQLASPPPVLTFDRDKIFGCIYLLVAIIILSSSIVLQAFTLGDFPAPMSLCVITSF 230 Query: 306 VGAVLTFFLQLIIEHGLEIGPPYVSARKLVGYALLGGVVPGAYGSFQASAMKKKGPVFVS 485 + L QL+ +H G P VS +VGY L G V G SF A++K+GPV VS Sbjct: 231 LAGSLAAVAQLVEDHQFSTGWPIVSVGDMVGYGFLSGAVSGICLSFNGWALEKRGPVLVS 290 Query: 486 TVSPIGTIFSVVISALT 536 SPIGT+ SVV SA T Sbjct: 291 MFSPIGTVCSVVFSAFT 307