BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00035964
         (271 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI25128.3| unnamed protein product [Vitis vinifera]              100   1e-19
ref|XP_002276156.1| PREDICTED: F-box protein SKIP22 [Vitis vinif...   100   1e-19
ref|XP_002522106.1| conserved hypothetical protein [Ricinus comm...    91   7e-17
gb|AFK46566.1| unknown [Medicago truncatula]                           87   1e-15
ref|XP_002327736.1| predicted protein [Populus trichocarpa] gi|2...    87   2e-15

>emb|CBI25128.3| unnamed protein product [Vitis vinifera]
          Length = 508

 Score =  100 bits (249), Expect = 1e-19
 Identities = 52/87 (59%), Positives = 62/87 (71%), Gaps = 6/87 (6%)
 Frame = -2

Query: 258 LDKFCFLPSLEFVCKSMTNA------SSKSFRESKVVEFWRIVKDELALPLLTDLCEKTG 97
           LD++ F P+L+ +     +A      SS S+ E++V EFW+IVKD LALPLLTDLCEK G
Sbjct: 284 LDEYRFAPTLDLMWTHSDSAEEKDRGSSNSYPENEVFEFWKIVKDGLALPLLTDLCEKGG 343

Query: 96  LKPPPCFMRLPAELKLKILEFLPANDL 16
           L PPPC MRLP ELKLKILE LP  DL
Sbjct: 344 LLPPPCLMRLPTELKLKILELLPGVDL 370


>ref|XP_002276156.1| PREDICTED: F-box protein SKIP22 [Vitis vinifera]
           gi|147804806|emb|CAN73524.1| hypothetical protein
           VITISV_010705 [Vitis vinifera]
          Length = 563

 Score =  100 bits (249), Expect = 1e-19
 Identities = 52/87 (59%), Positives = 62/87 (71%), Gaps = 6/87 (6%)
 Frame = -2

Query: 258 LDKFCFLPSLEFVCKSMTNA------SSKSFRESKVVEFWRIVKDELALPLLTDLCEKTG 97
           LD++ F P+L+ +     +A      SS S+ E++V EFW+IVKD LALPLLTDLCEK G
Sbjct: 346 LDEYRFAPTLDLMWTHSDSAEEKDRGSSNSYPENEVFEFWKIVKDGLALPLLTDLCEKGG 405

Query: 96  LKPPPCFMRLPAELKLKILEFLPANDL 16
           L PPPC MRLP ELKLKILE LP  DL
Sbjct: 406 LLPPPCLMRLPTELKLKILELLPGVDL 432


>ref|XP_002522106.1| conserved hypothetical protein [Ricinus communis]
           gi|223538705|gb|EEF40306.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 523

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 47/85 (55%), Positives = 59/85 (69%), Gaps = 4/85 (4%)
 Frame = -2

Query: 270 FRLCLDKFCFLPSLEFVC----KSMTNASSKSFRESKVVEFWRIVKDELALPLLTDLCEK 103
           +R CLDK  ++P++  +     KS T   + S+ E+ V E W+IVKD LALPLL DLCEK
Sbjct: 301 YRSCLDKCRYVPAIGSIWITWDKSDTAYENNSYTENVVFELWKIVKDHLALPLLIDLCEK 360

Query: 102 TGLKPPPCFMRLPAELKLKILEFLP 28
           TGL  PPC MRLPA++K KILE LP
Sbjct: 361 TGLVLPPCLMRLPADIKHKILESLP 385


>gb|AFK46566.1| unknown [Medicago truncatula]
          Length = 462

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 45/84 (53%), Positives = 56/84 (66%)
 Frame = -2

Query: 267 RLCLDKFCFLPSLEFVCKSMTNASSKSFRESKVVEFWRIVKDELALPLLTDLCEKTGLKP 88
           R+ LDK  F   LE + ++     + +    KV E W+IVKD LALPLL DLC+K GL+ 
Sbjct: 261 RVYLDKSRFAKPLELMLENSEFNGNFNDVGDKVFELWKIVKDGLALPLLIDLCDKAGLEL 320

Query: 87  PPCFMRLPAELKLKILEFLPANDL 16
           PPCFMRLP ELKL I E+LP +DL
Sbjct: 321 PPCFMRLPMELKLLIFEYLPGDDL 344


>ref|XP_002327736.1| predicted protein [Populus trichocarpa] gi|222836821|gb|EEE75214.1|
           predicted protein [Populus trichocarpa]
          Length = 545

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 46/88 (52%), Positives = 59/88 (67%), Gaps = 7/88 (7%)
 Frame = -2

Query: 258 LDKFCFLPSLEFVCKSMTN-------ASSKSFRESKVVEFWRIVKDELALPLLTDLCEKT 100
           LD   F+P+++FV ++  N        SS  + E+++ EFW+IVKD LALPLL D+CEK 
Sbjct: 332 LDINKFVPAIDFVWENDKNDGMNGSDRSSILYPENEIFEFWKIVKDGLALPLLIDICEKA 391

Query: 99  GLKPPPCFMRLPAELKLKILEFLPANDL 16
           GL  P C MRLP ELKLKI E LPA D+
Sbjct: 392 GLVLPSCLMRLPTELKLKIFELLPAIDI 419