BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00035958
         (755 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN60366.1| hypothetical protein VITISV_031870 [Vitis vinifera]   300   2e-79
gb|ABW74566.1| integrase [Boechera divaricarpa]                       292   5e-77
emb|CAN72676.1| hypothetical protein VITISV_020406 [Vitis vinifera]   289   4e-76
gb|AAT38758.1| Putative gag-pol polyprotein, identical [Solanum ...   260   2e-67
emb|CAN60238.1| hypothetical protein VITISV_032906 [Vitis vinifera]   259   3e-67

>emb|CAN60366.1| hypothetical protein VITISV_031870 [Vitis vinifera]
          Length = 1274

 Score =  300 bits (769), Expect = 2e-79
 Identities = 145/239 (60%), Positives = 177/239 (74%)
 Frame = +2

Query: 2    EKLTLTDGTPTADERLFRSMVGGLMYLTHSRPDIMFAVSLVSRFMHIPYVHHLGAAKRIL 181
            EKL   DGT  AD R FRS+VGGL+YLTH+RPDI FAV ++SRFMH P   HLGAAKR+L
Sbjct: 1032 EKLQAEDGTERADARRFRSLVGGLIYLTHTRPDIAFAVGVISRFMHCPSKQHLGAAKRLL 1091

Query: 182  CYIRATTSYGIWYGPVSKFSLVGFADSDWVGSVDDRKSTGSFIFSLGSRAISWLSKKQAT 361
             YI  T  +GIWYG V +F LVG+ DSDW G ++DRKS   ++FSLGS A+ W SKKQA 
Sbjct: 1092 RYIAGTYDFGIWYGHVQEFKLVGYTDSDWAGCLEDRKSXSGYMFSLGSGAVCWSSKKQAV 1151

Query: 362  VALSSCEAEYMAATSTICQAIWMQRILADLHLVQAAPTEIFCNNKATIGITKNPVFHGRT 541
             ALSS EAEY AATS+ CQA+W++RILAD++     PT I+C+NKA I +TKNP +HGRT
Sbjct: 1152 TALSSXEAEYTAATSSXCQAVWLRRILADINQEHEEPTVIYCDNKAAIAMTKNPAYHGRT 1211

Query: 542  KHIELCHHFIRDVVTEGKIVMQYCLTNDQTADGFTKALSYPKFWKFRSSLNVSPFCIKG 718
            KH+++  HFIRD+V EGK+V+QYC TN+Q AD  TKALS  K   FRS L V  F  +G
Sbjct: 1212 KHVDIRVHFIRDLVVEGKVVLQYCNTNEQVADVLTKALSRDKHVYFRSKLGVCNFESRG 1270


>gb|ABW74566.1| integrase [Boechera divaricarpa]
          Length = 1165

 Score =  292 bits (748), Expect = 5e-77
 Identities = 144/235 (61%), Positives = 169/235 (71%)
 Frame = +2

Query: 2    EKLTLTDGTPTADERLFRSMVGGLMYLTHSRPDIMFAVSLVSRFMHIPYVHHLGAAKRIL 181
            EKL   DGT  AD   FRS+VGGL+YLTH+RPDI FAVS +SRFMH P   H GAAKR+L
Sbjct: 923  EKLLAGDGTEKADATKFRSLVGGLIYLTHTRPDICFAVSAISRFMHGPTKQHFGAAKRLL 982

Query: 182  CYIRATTSYGIWYGPVSKFSLVGFADSDWVGSVDDRKSTGSFIFSLGSRAISWLSKKQAT 361
             YI  T  YG+WY  VSKF LVGF DSDW G V DRKST   +F+LGS A+ W SKKQ  
Sbjct: 983  RYIARTAEYGLWYCSVSKFKLVGFTDSDWAGCVQDRKSTSGHVFNLGSGAVCWSSKKQNV 1042

Query: 362  VALSSCEAEYMAATSTICQAIWMQRILADLHLVQAAPTEIFCNNKATIGITKNPVFHGRT 541
             ALSS EAEY AAT+  CQA+W++RILAD+   Q   T IFC+NKATI + KNP +HGRT
Sbjct: 1043 TALSSSEAEYTAATAAACQAVWLRRILADIKQEQEKATTIFCDNKATIAMNKNPAYHGRT 1102

Query: 542  KHIELCHHFIRDVVTEGKIVMQYCLTNDQTADGFTKALSYPKFWKFRSSLNVSPF 706
            KHI +  HFIRD+V+EG + ++YC TN+Q+AD  TKALS  KF  FRS L V  F
Sbjct: 1103 KHISIKVHFIRDLVSEGSVTLEYCSTNEQSADVLTKALSRNKFDYFRSKLGVCKF 1157


>emb|CAN72676.1| hypothetical protein VITISV_020406 [Vitis vinifera]
          Length = 1183

 Score =  289 bits (740), Expect = 4e-76
 Identities = 141/239 (58%), Positives = 173/239 (72%)
 Frame = +2

Query: 2    EKLTLTDGTPTADERLFRSMVGGLMYLTHSRPDIMFAVSLVSRFMHIPYVHHLGAAKRIL 181
            EKL   DGT  AD R FRS+VGGL+YLTH+RPD  FAV ++SRFMH P   HLGAAKR+L
Sbjct: 941  EKLQAEDGTERADARRFRSLVGGLIYLTHTRPDXAFAVGVISRFMHCPSKQHLGAAKRLL 1000

Query: 182  CYIRATTSYGIWYGPVSKFSLVGFADSDWVGSVDDRKSTGSFIFSLGSRAISWLSKKQAT 361
             YI  T  + IWYG V +F LVG+ DSDW G ++DRKST  ++FSLGS A+ W SKKQA 
Sbjct: 1001 RYIAGTYDFRIWYGHVQEFKLVGYTDSDWAGCLEDRKSTSGYMFSLGSGAVCWSSKKQAV 1060

Query: 362  VALSSCEAEYMAATSTICQAIWMQRILADLHLVQAAPTEIFCNNKATIGITKNPVFHGRT 541
             ALSS EAEY AATS+ CQA+W++RIL D++      T I+C+NKA I +TKNP +HGRT
Sbjct: 1061 TALSSSEAEYTAATSSACQAVWLRRILVDINQEHEEXTVIYCDNKAAIAMTKNPAYHGRT 1120

Query: 542  KHIELCHHFIRDVVTEGKIVMQYCLTNDQTADGFTKALSYPKFWKFRSSLNVSPFCIKG 718
            KH+++  HFIRD+V EG +V+QYC TN+Q AD  TKALS  K   FRS L V  F  +G
Sbjct: 1121 KHVBIRVHFIRDLVVEGXVVLQYCNTNEQVADVRTKALSRDKHVYFRSKLGVCNFESRG 1179


>gb|AAT38758.1| Putative gag-pol polyprotein, identical [Solanum demissum]
          Length = 1333

 Score =  260 bits (664), Expect = 2e-67
 Identities = 128/239 (53%), Positives = 165/239 (69%)
 Frame = +2

Query: 2    EKLTLTDGTPTADERLFRSMVGGLMYLTHSRPDIMFAVSLVSRFMHIPYVHHLGAAKRIL 181
            EKL   DGT  A+ +LFRS+VGGL YLTH+RPDI F+VS+VSRF+  P   H GAAKR+L
Sbjct: 1092 EKLQRADGTEKANPKLFRSLVGGLNYLTHTRPDIAFSVSVVSRFLQSPTKQHFGAAKRVL 1151

Query: 182  CYIRATTSYGIWYGPVSKFSLVGFADSDWVGSVDDRKSTGSFIFSLGSRAISWLSKKQAT 361
             Y+  TT +GIWY     F LVGF DSD+ G +DDRKST    FS GS  ++W SKKQ T
Sbjct: 1152 RYVAGTTDFGIWYSKAPNFRLVGFTDSDYAGCLDDRKSTSGSCFSFGSGVVTWSSKKQET 1211

Query: 362  VALSSCEAEYMAATSTICQAIWMQRILADLHLVQAAPTEIFCNNKATIGITKNPVFHGRT 541
            VALS+ EAEY AA+    QA+W++++L D    Q   TEIF ++K+ I + KNP FHGRT
Sbjct: 1212 VALSTSEAEYTAASLAARQALWLRKLLEDFSYEQKESTEIFSDSKSAIAMAKNPSFHGRT 1271

Query: 542  KHIELCHHFIRDVVTEGKIVMQYCLTNDQTADGFTKALSYPKFWKFRSSLNVSPFCIKG 718
            KHI++ +HFIR +V +G+IV+++C TN+Q AD FTK+L   K   FR  L V  F  +G
Sbjct: 1272 KHIDVQYHFIRTLVADGRIVLKFCSTNEQAADIFTKSLPQAKHEYFRLQLGVCDFESRG 1330


>emb|CAN60238.1| hypothetical protein VITISV_032906 [Vitis vinifera]
          Length = 1430

 Score =  259 bits (663), Expect = 3e-67
 Identities = 129/235 (54%), Positives = 159/235 (67%)
 Frame = +2

Query: 2    EKLTLTDGTPTADERLFRSMVGGLMYLTHSRPDIMFAVSLVSRFMHIPYVHHLGAAKRIL 181
            EKL   DGT  AD R FRS+VGGL+YLTH+RPDI FAV ++SRFMH P   HLGA KR+L
Sbjct: 1192 EKLQAEDGTERADARRFRSLVGGLIYLTHTRPDIAFAVGVISRFMHCPSKQHLGATKRLL 1251

Query: 182  CYIRATTSYGIWYGPVSKFSLVGFADSDWVGSVDDRKSTGSFIFSLGSRAISWLSKKQAT 361
             YI  T  + IW G V +F LVG+ DSDW G ++DRKST  ++FSLGS            
Sbjct: 1252 RYIAGTYDFRIWXGHVQEFKLVGYTDSDWAGCLEDRKSTSGYMFSLGS------------ 1299

Query: 362  VALSSCEAEYMAATSTICQAIWMQRILADLHLVQAAPTEIFCNNKATIGITKNPVFHGRT 541
                   AEY  ATS+ CQA+W++RILAD++     PT I+C+NKA I +TKNP +HGRT
Sbjct: 1300 -------AEYTVATSSACQAVWLRRILADINQEHEEPTVIYCDNKAAIAMTKNPAYHGRT 1352

Query: 542  KHIELCHHFIRDVVTEGKIVMQYCLTNDQTADGFTKALSYPKFWKFRSSLNVSPF 706
            KH+++  HFIRD+V EGK+V+QYC TN+Q AD  TKALS  K   FRS L V  F
Sbjct: 1353 KHVDIRVHFIRDLVVEGKVVLQYCNTNEQVADVLTKALSRDKHVYFRSKLGVCNF 1407



 Score =  154 bits (388), Expect = 3e-35
 Identities = 76/154 (49%), Positives = 95/154 (61%)
 Frame = +2

Query: 134 MHIPYVHHLGAAKRILCYIRATTSYGIWYGPVSKFSLVGFADSDWVGSVDDRKSTGSFIF 313
           MH     HLGAA R+L YI  T  + IWYG V +F LVG+ DSDW G V           
Sbjct: 1   MHCSSKQHLGAAXRLLRYIAGTYDFRIWYGHVQEFKLVGYTDSDWAGXV----------- 49

Query: 314 SLGSRAISWLSKKQATVALSSCEAEYMAATSTICQAIWMQRILADLHLVQAAPTEIFCNN 493
                   W SKKQA   LSS EAEY A TS+ CQA+W++RIL D++      T I+C+N
Sbjct: 50  -------CWXSKKQAVTXLSSSEAEYTAXTSSACQAVWLRRILXDINQEHEEXTVIYCDN 102

Query: 494 KATIGITKNPVFHGRTKHIELCHHFIRDVVTEGK 595
           KA I +TKNP +HGRTKH+++  HFIRD+V EG+
Sbjct: 103 KAAIAMTKNPAYHGRTKHVDIRVHFIRDLVVEGE 136