BLASTX nr result

ID: Coptis24_contig00035939 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00035939
         (367 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFJ21664.1| cullin 1-like protein A [Prunus avium]                 174   7e-42
gb|AFW82618.1| hypothetical protein ZEAMMB73_584416 [Zea mays] g...   174   9e-42
gb|AFW82617.1| hypothetical protein ZEAMMB73_584416 [Zea mays]        174   9e-42
ref|XP_002440598.1| hypothetical protein SORBIDRAFT_09g003820 [S...   174   9e-42
ref|XP_002516899.1| Cullin-1, putative [Ricinus communis] gi|223...   174   9e-42

>gb|AFJ21664.1| cullin 1-like protein A [Prunus avium]
          Length = 738

 Score =  174 bits (441), Expect = 7e-42
 Identities = 78/121 (64%), Positives = 93/121 (76%)
 Frame = -2

Query: 366 EKGITKLMKILEGYPELPLNSEEYMQLYTTVYTLCTQRPPHDYSQQLYDQYYRAFDAYFA 187
           +KGITKL KILEG PE   NSEEYM LYTT+Y +CTQ+PP+DYSQQLYD+Y  AF+ Y  
Sbjct: 16  QKGITKLKKILEGIPEPQFNSEEYMMLYTTIYNMCTQKPPNDYSQQLYDKYREAFEEYIT 75

Query: 186 SIVLPSIQEKHGECTLRDLVKRWANHKTLLNWIIPFFHYLDRFFVTRMKLEPLKNVGLLC 7
           S VLPS++EKH E  LR+LVKRWANHK ++ W+  FFHYLDR+F+ R  L  L  VGL C
Sbjct: 76  STVLPSLREKHDEFMLRELVKRWANHKVMVRWLSRFFHYLDRYFIARRSLPALNEVGLTC 135

Query: 6   F 4
           F
Sbjct: 136 F 136


>gb|AFW82618.1| hypothetical protein ZEAMMB73_584416 [Zea mays]
           gi|413949970|gb|AFW82619.1| hypothetical protein
           ZEAMMB73_584416 [Zea mays]
          Length = 235

 Score =  174 bits (440), Expect = 9e-42
 Identities = 75/121 (61%), Positives = 96/121 (79%)
 Frame = -2

Query: 366 EKGITKLMKILEGYPELPLNSEEYMQLYTTVYTLCTQRPPHDYSQQLYDQYYRAFDAYFA 187
           +KGITKL  ILEG PE   +SE+YM LYTT+Y +CTQ+PPHDYSQQLYD+Y  +F+ Y  
Sbjct: 19  QKGITKLKNILEGKPEPQFSSEDYMMLYTTIYNMCTQKPPHDYSQQLYDKYRESFEEYIT 78

Query: 186 SIVLPSIQEKHGECTLRDLVKRWANHKTLLNWIIPFFHYLDRFFVTRMKLEPLKNVGLLC 7
           S+VLPS++EKH E  LR+LV+RW+NHK ++ W+  FFHYLDR+F++R  L PLK VGL C
Sbjct: 79  SMVLPSLREKHDEFMLRELVQRWSNHKVMVRWLSRFFHYLDRYFISRRSLTPLKEVGLTC 138

Query: 6   F 4
           F
Sbjct: 139 F 139


>gb|AFW82617.1| hypothetical protein ZEAMMB73_584416 [Zea mays]
          Length = 744

 Score =  174 bits (440), Expect = 9e-42
 Identities = 75/121 (61%), Positives = 96/121 (79%)
 Frame = -2

Query: 366 EKGITKLMKILEGYPELPLNSEEYMQLYTTVYTLCTQRPPHDYSQQLYDQYYRAFDAYFA 187
           +KGITKL  ILEG PE   +SE+YM LYTT+Y +CTQ+PPHDYSQQLYD+Y  +F+ Y  
Sbjct: 19  QKGITKLKNILEGKPEPQFSSEDYMMLYTTIYNMCTQKPPHDYSQQLYDKYRESFEEYIT 78

Query: 186 SIVLPSIQEKHGECTLRDLVKRWANHKTLLNWIIPFFHYLDRFFVTRMKLEPLKNVGLLC 7
           S+VLPS++EKH E  LR+LV+RW+NHK ++ W+  FFHYLDR+F++R  L PLK VGL C
Sbjct: 79  SMVLPSLREKHDEFMLRELVQRWSNHKVMVRWLSRFFHYLDRYFISRRSLTPLKEVGLTC 138

Query: 6   F 4
           F
Sbjct: 139 F 139


>ref|XP_002440598.1| hypothetical protein SORBIDRAFT_09g003820 [Sorghum bicolor]
           gi|241945883|gb|EES19028.1| hypothetical protein
           SORBIDRAFT_09g003820 [Sorghum bicolor]
          Length = 744

 Score =  174 bits (440), Expect = 9e-42
 Identities = 75/121 (61%), Positives = 96/121 (79%)
 Frame = -2

Query: 366 EKGITKLMKILEGYPELPLNSEEYMQLYTTVYTLCTQRPPHDYSQQLYDQYYRAFDAYFA 187
           +KGITKL  ILEG PE   +SE+YM LYTT+Y +CTQ+PPHDYSQQLYD+Y  +F+ Y  
Sbjct: 19  QKGITKLKNILEGKPEPQFSSEDYMMLYTTIYNMCTQKPPHDYSQQLYDKYRESFEEYIT 78

Query: 186 SIVLPSIQEKHGECTLRDLVKRWANHKTLLNWIIPFFHYLDRFFVTRMKLEPLKNVGLLC 7
           S+VLPS++EKH E  LR+LV+RW+NHK ++ W+  FFHYLDR+F++R  L PLK VGL C
Sbjct: 79  SMVLPSLREKHDEFMLRELVQRWSNHKVMVRWLSRFFHYLDRYFISRRSLTPLKEVGLTC 138

Query: 6   F 4
           F
Sbjct: 139 F 139


>ref|XP_002516899.1| Cullin-1, putative [Ricinus communis] gi|223543987|gb|EEF45513.1|
           Cullin-1, putative [Ricinus communis]
          Length = 744

 Score =  174 bits (440), Expect = 9e-42
 Identities = 76/121 (62%), Positives = 93/121 (76%)
 Frame = -2

Query: 366 EKGITKLMKILEGYPELPLNSEEYMQLYTTVYTLCTQRPPHDYSQQLYDQYYRAFDAYFA 187
           +KGITKL  ILEG PE   +SE+YM LYTT+Y +CTQ+PPHDYSQQLYD+Y  +F+ Y  
Sbjct: 19  QKGITKLKNILEGLPEPQFSSEDYMMLYTTIYNMCTQKPPHDYSQQLYDKYRESFEEYIT 78

Query: 186 SIVLPSIQEKHGECTLRDLVKRWANHKTLLNWIIPFFHYLDRFFVTRMKLEPLKNVGLLC 7
           S VLPS++EKH E  LR+LVKRWANHK ++ W+  FFHYLDR+F+ R  L PL  VGL C
Sbjct: 79  STVLPSLREKHDEFMLRELVKRWANHKVMVRWLSRFFHYLDRYFIARRSLPPLNEVGLTC 138

Query: 6   F 4
           F
Sbjct: 139 F 139


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