BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00035938
         (387 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEP33757.1| organelle transcript processing 82, partial [Aeth...   116   2e-24
gb|AEP33763.1| organelle transcript processing 82, partial [Isat...   113   1e-23
gb|AEP33762.1| organelle transcript processing 82, partial [Hesp...   113   1e-23
gb|AEP33771.1| organelle transcript processing 82, partial [Thla...   113   2e-23
gb|AEP33767.1| organelle transcript processing 82, partial [Matt...   113   2e-23

>gb|AEP33757.1| organelle transcript processing 82, partial [Aethionema
           cordifolium]
          Length = 679

 Score =  116 bits (291), Expect = 2e-24
 Identities = 59/127 (46%), Positives = 87/127 (68%), Gaps = 3/127 (2%)
 Frame = +3

Query: 3   SFYTGMRERGMVPNNYTFTFLIKACASSNSS--GPAVHAQSIVFGIPDSDVHVYTSLLNM 176
           + Y  M   G+ PN+YTF FL K+CA S ++  G  +HAQ + +G+   D+HV+TSL++M
Sbjct: 64  NLYVYMISLGLSPNSYTFPFLFKSCAKSKAAQEGKQIHAQILKYGLT-VDLHVHTSLISM 122

Query: 177 YAL-GNVEIARKVFDRMKYKTAATWNSMIVAYTSRGGIEAAKELFDEMPDKDLVSWNVMI 353
           YA  G VE A KVFD   ++   ++ +MI  Y SRG ++ A+++FDE+P KD+VSWN MI
Sbjct: 123 YAQNGIVEDAHKVFDTSSHRDVVSYTAMITGYASRGNMDKAQKMFDEIPIKDVVSWNAMI 182

Query: 354 TGYAKHG 374
           +GYA+ G
Sbjct: 183 SGYAEIG 189


>gb|AEP33763.1| organelle transcript processing 82, partial [Isatis tinctoria]
          Length = 671

 Score =  113 bits (283), Expect = 1e-23
 Identities = 57/127 (44%), Positives = 85/127 (66%), Gaps = 3/127 (2%)
 Frame = +3

Query: 3   SFYTGMRERGMVPNNYTFTFLIKACASSNS--SGPAVHAQSIVFGIPDSDVHVYTSLLNM 176
           + Y  M   G++PN+YTF FL+K+CA S +   G  +H Q +  G  D D++V+TSL++M
Sbjct: 50  TLYVCMVSLGLLPNSYTFPFLLKSCAKSKTFTEGQQIHGQVLKLGF-DLDLYVHTSLISM 108

Query: 177 YALG-NVEIARKVFDRMKYKTAATWNSMIVAYTSRGGIEAAKELFDEMPDKDLVSWNVMI 353
           Y     +E A KVFDR  ++   ++ ++I  Y SRG I +A++LFDE+P KD+VSWN MI
Sbjct: 109 YVQNWRLEDAYKVFDRSSHRDVVSYTALITGYASRGDIRSAQKLFDEIPVKDVVSWNAMI 168

Query: 354 TGYAKHG 374
           +GYA+ G
Sbjct: 169 SGYAETG 175


>gb|AEP33762.1| organelle transcript processing 82, partial [Hesperis matronalis]
          Length = 672

 Score =  113 bits (283), Expect = 1e-23
 Identities = 57/125 (45%), Positives = 86/125 (68%), Gaps = 3/125 (2%)
 Frame = +3

Query: 9   YTGMRERGMVPNNYTFTFLIKACASSNS--SGPAVHAQSIVFGIPDSDVHVYTSLLNMYA 182
           Y  M   G++PN +TF FL+K+CA S +   G  +H   +  G  D D++V+TSL++MYA
Sbjct: 63  YVVMISLGLLPNFFTFPFLLKSCAKSKTFKEGQQIHGHVLKLGF-DLDLYVHTSLISMYA 121

Query: 183 L-GNVEIARKVFDRMKYKTAATWNSMIVAYTSRGGIEAAKELFDEMPDKDLVSWNVMITG 359
             G +E A+KVFDR  ++   ++ ++I  Y SRG IE+A+++FDE+P KD+VSWN MI+G
Sbjct: 122 QNGRLEDAQKVFDRSSHRDVVSYTALITGYASRGYIESAQKMFDEIPIKDVVSWNAMISG 181

Query: 360 YAKHG 374
           YA+ G
Sbjct: 182 YAETG 186


>gb|AEP33771.1| organelle transcript processing 82, partial [Thlaspi arvense]
          Length = 673

 Score =  113 bits (282), Expect = 2e-23
 Identities = 56/125 (44%), Positives = 84/125 (67%), Gaps = 3/125 (2%)
 Frame = +3

Query: 9   YTGMRERGMVPNNYTFTFLIKACASSNS--SGPAVHAQSIVFGIPDSDVHVYTSLLNMYA 182
           Y  M   G++PN+YTF FL+K+CA S +   G  +H   +  G  + D++V+TSL++MYA
Sbjct: 54  YVVMISLGLLPNSYTFPFLLKSCAKSKAFEEGQQIHGHVLKLGY-EPDLYVHTSLISMYA 112

Query: 183 L-GNVEIARKVFDRMKYKTAATWNSMIVAYTSRGGIEAAKELFDEMPDKDLVSWNVMITG 359
             G +E A KVFDR  ++   ++ ++I  Y S G I +A+E+FDE+P KD+VSWN MI+G
Sbjct: 113 QNGRLEDAHKVFDRSSHRDVVSYTALITGYASSGNIRSAQEMFDEIPVKDVVSWNAMISG 172

Query: 360 YAKHG 374
           YA+ G
Sbjct: 173 YAETG 177


>gb|AEP33767.1| organelle transcript processing 82, partial [Matthiola incana]
          Length = 694

 Score =  113 bits (282), Expect = 2e-23
 Identities = 57/125 (45%), Positives = 84/125 (67%), Gaps = 3/125 (2%)
 Frame = +3

Query: 9   YTGMRERGMVPNNYTFTFLIKACASSN--SSGPAVHAQSIVFGIPDSDVHVYTSLLNMYA 182
           Y  M   G++P++YTF FL+K+CA S     G  +H   +  G  D D++V+TSL++MYA
Sbjct: 77  YLVMISLGLLPDSYTFPFLLKSCAKSKIRKEGQQIHGHVLKLGF-DLDIYVHTSLISMYA 135

Query: 183 L-GNVEIARKVFDRMKYKTAATWNSMIVAYTSRGGIEAAKELFDEMPDKDLVSWNVMITG 359
             G +E ARKVFD   ++   ++ ++I  Y SRG IE+A++LFDE+P KD+VSWN MI+G
Sbjct: 136 QNGRLEDARKVFDISSHRDVVSYTALIAGYVSRGYIESAQKLFDEIPGKDVVSWNAMISG 195

Query: 360 YAKHG 374
           Y + G
Sbjct: 196 YVETG 200