BLASTX nr result

ID: Coptis24_contig00035934 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00035934
         (404 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26755.3| unnamed protein product [Vitis vinifera]              129   2e-28
ref|XP_002285268.1| PREDICTED: glutamate decarboxylase-like [Vit...   129   2e-28
ref|NP_001052919.1| Os04g0447800 [Oryza sativa Japonica Group] g...    82   3e-14
dbj|BAJ96205.1| predicted protein [Hordeum vulgare subsp. vulgare]     82   3e-14
gb|EEE61081.1| hypothetical protein OsJ_14961 [Oryza sativa Japo...    82   3e-14

>emb|CBI26755.3| unnamed protein product [Vitis vinifera]
          Length = 567

 Score =  129 bits (325), Expect = 2e-28
 Identities = 65/108 (60%), Positives = 83/108 (76%), Gaps = 1/108 (0%)
 Frame = +3

Query: 84  RHYGWIVPAYTMPANAQHVTILRVVVREDLGRQLVEKLLSHIESALNELIDTPSVVPRIT 263
           R+YGWIVPAYTMPANA++VT+LRVVVRED GRQLVEKLL HI  AL E+ D  S VP I 
Sbjct: 401 RNYGWIVPAYTMPANAENVTVLRVVVREDFGRQLVEKLLFHIGVALKEVTDAASSVPMIR 460

Query: 264 FTVKIRTTKEKGSYGDDGTIHIPATSVHWEQETPETTHKEV-LIDGKT 404
            TV+++  + + + G +GT+HIPA SVHW+ + PET   +V ++DGKT
Sbjct: 461 LTVEMKADESEMNAG-EGTLHIPAASVHWKHDKPETVDTQVPIMDGKT 507


>ref|XP_002285268.1| PREDICTED: glutamate decarboxylase-like [Vitis vinifera]
          Length = 511

 Score =  129 bits (325), Expect = 2e-28
 Identities = 65/108 (60%), Positives = 83/108 (76%), Gaps = 1/108 (0%)
 Frame = +3

Query: 84  RHYGWIVPAYTMPANAQHVTILRVVVREDLGRQLVEKLLSHIESALNELIDTPSVVPRIT 263
           R+YGWIVPAYTMPANA++VT+LRVVVRED GRQLVEKLL HI  AL E+ D  S VP I 
Sbjct: 401 RNYGWIVPAYTMPANAENVTVLRVVVREDFGRQLVEKLLFHIGVALKEVTDAASSVPMIR 460

Query: 264 FTVKIRTTKEKGSYGDDGTIHIPATSVHWEQETPETTHKEV-LIDGKT 404
            TV+++  + + + G +GT+HIPA SVHW+ + PET   +V ++DGKT
Sbjct: 461 LTVEMKADESEMNAG-EGTLHIPAASVHWKHDKPETVDTQVPIMDGKT 507


>ref|NP_001052919.1| Os04g0447800 [Oryza sativa Japonica Group]
           gi|38344825|emb|CAD40877.2| OSJNBa0064H22.6 [Oryza
           sativa Japonica Group] gi|113564490|dbj|BAF14833.1|
           Os04g0447800 [Oryza sativa Japonica Group]
           gi|116310182|emb|CAH67194.1| OSIGBa0152K17.6 [Oryza
           sativa Indica Group] gi|218194937|gb|EEC77364.1|
           hypothetical protein OsI_16074 [Oryza sativa Indica
           Group]
          Length = 500

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 41/77 (53%), Positives = 55/77 (71%), Gaps = 4/77 (5%)
 Frame = +3

Query: 84  RHYGWIVPAYTMPANAQHVTILRVVVREDLGRQLVEKLLSHIESALNEL-IDTPSVVPRI 260
           R YGWIVPAYTMPA  +H+T+LRVVVRED GR L E+ LSH+  AL+E+ +   + VPR+
Sbjct: 398 RRYGWIVPAYTMPAALEHMTVLRVVVREDFGRPLAERFLSHVRMALDEMDLAARAPVPRV 457

Query: 261 TFTVKI---RTTKEKGS 302
             T+++   RT  E+ S
Sbjct: 458 QLTIELGPARTAGEEAS 474


>dbj|BAJ96205.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 499

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 40/77 (51%), Positives = 56/77 (72%), Gaps = 4/77 (5%)
 Frame = +3

Query: 84  RHYGWIVPAYTMPANAQHVTILRVVVREDLGRQLVEKLLSHIESALNEL-IDTPSVVPRI 260
           R +GWIVPAYTMPAN +H+T+LRVVVRED GR L E+ LSH+  AL+EL +     VP++
Sbjct: 397 RRFGWIVPAYTMPANLEHMTVLRVVVREDFGRPLAERFLSHVRMALSELDLAAKGPVPKM 456

Query: 261 TFTVKI---RTTKEKGS 302
             T+++   R+ +E+ S
Sbjct: 457 RLTIELGPARSAEEEAS 473


>gb|EEE61081.1| hypothetical protein OsJ_14961 [Oryza sativa Japonica Group]
          Length = 519

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 41/77 (53%), Positives = 55/77 (71%), Gaps = 4/77 (5%)
 Frame = +3

Query: 84  RHYGWIVPAYTMPANAQHVTILRVVVREDLGRQLVEKLLSHIESALNEL-IDTPSVVPRI 260
           R YGWIVPAYTMPA  +H+T+LRVVVRED GR L E+ LSH+  AL+E+ +   + VPR+
Sbjct: 417 RRYGWIVPAYTMPAALEHMTVLRVVVREDFGRPLAERFLSHVRMALDEMDLAARAPVPRV 476

Query: 261 TFTVKI---RTTKEKGS 302
             T+++   RT  E+ S
Sbjct: 477 QLTIELGPARTAGEEAS 493


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