BLASTX nr result

ID: Coptis24_contig00035933 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00035933
         (685 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267170.2| PREDICTED: protein STRUBBELIG-RECEPTOR FAMIL...   146   4e-33
ref|XP_002331522.1| predicted protein [Populus trichocarpa] gi|2...   139   7e-31
ref|XP_002518426.1| Serine/threonine-protein kinase PBS1, putati...   135   1e-29
ref|XP_004164349.1| PREDICTED: protein STRUBBELIG-RECEPTOR FAMIL...   129   7e-28
ref|XP_004145432.1| PREDICTED: protein STRUBBELIG-RECEPTOR FAMIL...   129   7e-28

>ref|XP_002267170.2| PREDICTED: protein STRUBBELIG-RECEPTOR FAMILY 8-like [Vitis
           vinifera] gi|297741762|emb|CBI32991.3| unnamed protein
           product [Vitis vinifera]
          Length = 729

 Score =  146 bits (368), Expect = 4e-33
 Identities = 94/229 (41%), Positives = 115/229 (50%), Gaps = 1/229 (0%)
 Frame = +2

Query: 2   SYNNFTGDIPXXXXXXXXXXTLYVQNNQLTGSXXXXXXXXXXXXXXXXXRFSGWLPPEFI 181
           S NNFTGD+P          TLY+QNNQLTG                   FSGW+P E  
Sbjct: 187 SVNNFTGDLPNSFTSLSNLSTLYLQNNQLTGPLSVLTGLPLTDLNVANNNFSGWIPSELR 246

Query: 182 LIPNLIYDXXXXXXXXXXXXXXXXXXXXXXXXXXXXHNGTHRNAAQGSNGQGSDSVRNRS 361
            I   IYD                            H+         S+GQ S+S  N +
Sbjct: 247 SIRKFIYDGNSFDNGPAPPPPPYTPPPPSRSRSNRTHSPPEARTPSSSDGQSSNS-DNGN 305

Query: 362 KGLTVGPIVGIVLGTVLVSLFVMVAFVFCLRKDSKGKHEKESNAQASVGTIHANAHKGNG 541
           KGL +GPI+GIVLG++LV L  ++A VFC+RK  K    K + A+ SVG++     K N 
Sbjct: 306 KGLAIGPIIGIVLGSLLV-LVALIALVFCVRKAKK----KGTGARPSVGSVPVVTEKVNT 360

Query: 542 EA-RGKNIKSMATVADLKPLPAEKLVGERELGNNGSGNRVKSPITATSY 685
           E  + +  K  ATV DLKP PAE L+ ER  G NGSG RVKSPITATSY
Sbjct: 361 ETMQEQRTKFTATVTDLKPPPAENLMVERVQGKNGSGKRVKSPITATSY 409


>ref|XP_002331522.1| predicted protein [Populus trichocarpa] gi|222873746|gb|EEF10877.1|
           predicted protein [Populus trichocarpa]
          Length = 672

 Score =  139 bits (349), Expect = 7e-31
 Identities = 89/228 (39%), Positives = 115/228 (50%)
 Frame = +2

Query: 2   SYNNFTGDIPXXXXXXXXXXTLYVQNNQLTGSXXXXXXXXXXXXXXXXXRFSGWLPPEFI 181
           S+N+F+GD+P          TL VQNNQLTGS                  FSGW+P E  
Sbjct: 136 SFNSFSGDLPSSFNSLSNLSTLNVQNNQLTGSLNVLTGLPLTTLNVANNNFSGWIPQELS 195

Query: 182 LIPNLIYDXXXXXXXXXXXXXXXXXXXXXXXXXXXXHNGTHRNAAQGSNGQGSDSVRNRS 361
            IPN IYD                            H G+       S+GQ S S     
Sbjct: 196 SIPNFIYDGNSFDNGPSPPPPPYTPPPPGKSHRNRTHPGSGAPVTPSSDGQPSQS----D 251

Query: 362 KGLTVGPIVGIVLGTVLVSLFVMVAFVFCLRKDSKGKHEKESNAQASVGTIHANAHKGNG 541
           KG++VG IVG+ LG++++ L V++A VFC++K       KE    A+ G+  A+      
Sbjct: 252 KGISVGAIVGVALGSLVLVLIVLLALVFCIKKHKS----KEIGPLATRGSRPADTDDNMQ 307

Query: 542 EARGKNIKSMATVADLKPLPAEKLVGERELGNNGSGNRVKSPITATSY 685
           E+R   +K+MA V DLKP PAEKLV ER  GN+GS  R+KSPITATSY
Sbjct: 308 ESR---VKNMAAVTDLKPPPAEKLVVERLQGNSGSIKRMKSPITATSY 352


>ref|XP_002518426.1| Serine/threonine-protein kinase PBS1, putative [Ricinus communis]
           gi|223542271|gb|EEF43813.1| Serine/threonine-protein
           kinase PBS1, putative [Ricinus communis]
          Length = 640

 Score =  135 bits (339), Expect = 1e-29
 Identities = 85/237 (35%), Positives = 117/237 (49%), Gaps = 9/237 (3%)
 Frame = +2

Query: 2   SYNNFTGDIPXXXXXXXXXXTLYVQNNQLTGSXXXXXXXXXXXXXXXXXRFSGWLPPEFI 181
           S+NNF+G++P          T Y+QNNQLTGS                   +GW+P E  
Sbjct: 92  SFNNFSGNLPSSFSSLSNLSTFYIQNNQLTGSLDVLAGLPLTTLNVANNHLTGWIPRELN 151

Query: 182 LIPNLIYDXXXXXXXXXXXXXXXXXXXXXXXXXXXXHNGTHRNAAQGSNGQGSDSVRNRS 361
            +PN IYD                            H+G+       S+ Q S+S     
Sbjct: 152 SVPNFIYDGNSFDNGPAPPPPPYTPPPPGRSRNNHSHSGSGTRTPPSSDDQSSES----D 207

Query: 362 KGLTVGPIVGIVLGTVLVSLFVMVAFVFCLRKDSKGKHEKESNAQASVGTIHANAHK--- 532
           KG++VG IVGIVLG+VL+    ++A +FC RK    K +K+  A  S G+  A       
Sbjct: 208 KGMSVGAIVGIVLGSVLLIFIALLAVLFCTRK----KKQKDGGAIVSQGSRSAGTTDSAK 263

Query: 533 ------GNGEARGKNIKSMATVADLKPLPAEKLVGERELGNNGSGNRVKSPITATSY 685
                 G+ E + + +KS+A VADLKP PAEKLV ++  G++GS  R+KSPITATSY
Sbjct: 264 FSSVIAGDTEMQEQRVKSIAAVADLKPPPAEKLVVDKLQGHSGSVKRMKSPITATSY 320


>ref|XP_004164349.1| PREDICTED: protein STRUBBELIG-RECEPTOR FAMILY 8-like [Cucumis
           sativus]
          Length = 647

 Score =  129 bits (323), Expect = 7e-28
 Identities = 83/229 (36%), Positives = 109/229 (47%), Gaps = 1/229 (0%)
 Frame = +2

Query: 2   SYNNFTGDIPXXXXXXXXXXTLYVQNNQLTGSXXXXXXXXXXXXXXXXXRFSGWLPPEFI 181
           S+NNFTGD+P          +L+ QNN+LTGS                  FSGW+P E  
Sbjct: 136 SFNNFTGDLPKSLGTLSNVSSLFFQNNRLTGSLNILIDLPLTTLNVANNNFSGWIPQELK 195

Query: 182 LIPNLIYDXXXXXXXXXXXXXXXXXXXXXXXXXXXXHNGTHRNAAQGSNGQGSDSVRNRS 361
            + + IYD                            H G+        + +GS S  N  
Sbjct: 196 SVESFIYDGNSFDNSPAPPPPPFTPPPPGRSRNSPKHPGSSGGTHTAPSSEGSSSHSN-- 253

Query: 362 KGLTVGPIVGIVLGTVLVSLFVMVAFVFCLRKDS-KGKHEKESNAQASVGTIHANAHKGN 538
           KGL V  IVGIVLG ++  L V+VAF  C +K   K    + S+ + S+GT        N
Sbjct: 254 KGLPVLAIVGIVLGAIIFVLIVLVAFAVCFQKRKRKNIGLRASSGRLSIGT------SVN 307

Query: 539 GEARGKNIKSMATVADLKPLPAEKLVGERELGNNGSGNRVKSPITATSY 685
            E +   +KS+A VAD+KPLPAEK+  ER    NGS  R+K+PITATSY
Sbjct: 308 AEVQEHRVKSVAAVADIKPLPAEKMNPERLQAKNGSVKRIKAPITATSY 356


>ref|XP_004145432.1| PREDICTED: protein STRUBBELIG-RECEPTOR FAMILY 8-like [Cucumis
           sativus]
          Length = 711

 Score =  129 bits (323), Expect = 7e-28
 Identities = 83/229 (36%), Positives = 109/229 (47%), Gaps = 1/229 (0%)
 Frame = +2

Query: 2   SYNNFTGDIPXXXXXXXXXXTLYVQNNQLTGSXXXXXXXXXXXXXXXXXRFSGWLPPEFI 181
           S+NNFTGD+P          +L+ QNN+LTGS                  FSGW+P E  
Sbjct: 171 SFNNFTGDLPKSLGTLSNVSSLFFQNNRLTGSLNILIDLPLTTLNVANNNFSGWIPQELK 230

Query: 182 LIPNLIYDXXXXXXXXXXXXXXXXXXXXXXXXXXXXHNGTHRNAAQGSNGQGSDSVRNRS 361
            + + IYD                            H G+        + +GS S  N  
Sbjct: 231 SVESFIYDGNSFDNSPAPPPPPFTPPPPGRSRNSPKHPGSSGGTHTAPSSEGSSSHSN-- 288

Query: 362 KGLTVGPIVGIVLGTVLVSLFVMVAFVFCLRKDS-KGKHEKESNAQASVGTIHANAHKGN 538
           KGL V  IVGIVLG ++  L V+VAF  C +K   K    + S+ + S+GT        N
Sbjct: 289 KGLPVLAIVGIVLGAIIFVLIVLVAFAVCFQKRKRKNIGLRASSGRLSIGT------SVN 342

Query: 539 GEARGKNIKSMATVADLKPLPAEKLVGERELGNNGSGNRVKSPITATSY 685
            E +   +KS+A VAD+KPLPAEK+  ER    NGS  R+K+PITATSY
Sbjct: 343 AEVQEHRVKSVAAVADIKPLPAEKMNPERLQAKNGSVKRIKAPITATSY 391


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