BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00035931
         (449 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABS32230.1| transducin family protein [Carica papaya] gi|1645...   128   6e-28
ref|XP_002326013.1| predicted protein [Populus trichocarpa] gi|2...   124   1e-26
gb|AAF43237.1|AC012654_21 Contains similarity to the vegetative ...   120   2e-25
ref|NP_177329.2| transducin/WD-40 repeat-containing protein [Ara...   120   2e-25
ref|XP_002327217.1| predicted protein [Populus trichocarpa] gi|2...   120   2e-25

>gb|ABS32230.1| transducin family protein [Carica papaya]
           gi|164522082|gb|ABY60781.1| transducin family protein
           [Carica papaya]
          Length = 408

 Score =  128 bits (321), Expect = 6e-28
 Identities = 64/123 (52%), Positives = 75/123 (60%), Gaps = 1/123 (0%)
 Frame = +1

Query: 79  AVACSPTDSTLVAAGGSGTGAFLWNINQGDQRQVIIGHXXXXXXXXXXXXGKFLACGTGQ 258
           AVACSPTD+ LVA GG     FLW I +GD    ++GH            G+FLA G   
Sbjct: 65  AVACSPTDARLVATGGGDDKGFLWKIGRGDWGSELLGHKDSVSCLAFSTDGQFLASGGLD 124

Query: 259 GRVQVWDICSSSHKRTFDGPE-DIEWVRWHPRGHFVLAGSMDDFTVWLWDIDEDAYLYTF 435
           G VQ+WD  S + K   +GPE  IEWVRWHPRGH VLAGS +D TVW+W+ D  AYL  F
Sbjct: 125 GLVQIWDASSGNIKCALEGPEKGIEWVRWHPRGHLVLAGS-EDCTVWMWNADRGAYLNMF 183

Query: 436 FGH 444
            GH
Sbjct: 184 SGH 186


>ref|XP_002326013.1| predicted protein [Populus trichocarpa] gi|222862888|gb|EEF00395.1|
           predicted protein [Populus trichocarpa]
          Length = 390

 Score =  124 bits (310), Expect = 1e-26
 Identities = 61/123 (49%), Positives = 73/123 (59%), Gaps = 1/123 (0%)
 Frame = +1

Query: 82  VACSPTDSTLVAAGGSGTGAFLWNINQGDQRQVIIGHXXXXXXXXXXXXGKFLACGTGQG 261
           V+CSPTD  LVA GG     FLW I  GD    + GH            G+ LA G   G
Sbjct: 66  VSCSPTDPLLVATGGGDDKGFLWKIGLGDWASELKGHKDSVSCLAFSSDGQLLASGGFDG 125

Query: 262 RVQVWDICSSSHKRTFDGP-EDIEWVRWHPRGHFVLAGSMDDFTVWLWDIDEDAYLYTFF 438
            VQ+WD  S +HK   +GP E IEWVRWHP+GH VLAGS +D +VW+W+ D  AYL +F 
Sbjct: 126 LVQIWDASSGNHKCVLEGPDEGIEWVRWHPKGHLVLAGS-EDKSVWMWNADRGAYLNSFT 184

Query: 439 GHE 447
           GHE
Sbjct: 185 GHE 187


>gb|AAF43237.1|AC012654_21 Contains similarity to the vegetative incompatibility protein
           HET-E-1 from Podospora ansering gi|3023956; It contains
           5 WD40 domains PF|00400 [Arabidopsis thaliana]
          Length = 370

 Score =  120 bits (300), Expect = 2e-25
 Identities = 61/123 (49%), Positives = 75/123 (60%), Gaps = 1/123 (0%)
 Frame = +1

Query: 79  AVACSPTDSTLVAAGGSGTGAFLWNINQGDQRQVIIGHXXXXXXXXXXXXGKFLACGTGQ 258
           A+ACSPTD+TLVA GG    AFLW I  GD    + GH            G+ LA G   
Sbjct: 66  ALACSPTDATLVATGGGDDKAFLWKIGNGDWAAELPGHKDSVSCLAFSYDGQLLASGGLD 125

Query: 259 GRVQVWDICSSSHKRTFDGP-EDIEWVRWHPRGHFVLAGSMDDFTVWLWDIDEDAYLYTF 435
           G VQ++D  S + K   DGP   IEWVRWHPRGH VLAGS +D ++W+W+ D++AYL  F
Sbjct: 126 GVVQIFDASSGTLKCVLDGPGAGIEWVRWHPRGHIVLAGS-EDCSLWMWNADKEAYLNMF 184

Query: 436 FGH 444
            GH
Sbjct: 185 SGH 187


>ref|NP_177329.2| transducin/WD-40 repeat-containing protein [Arabidopsis thaliana]
           gi|19347844|gb|AAL86002.1| unknown protein [Arabidopsis
           thaliana] gi|25054983|gb|AAN71963.1| unknown protein
           [Arabidopsis thaliana] gi|332197118|gb|AEE35239.1|
           transducin/WD-40 repeat-containing protein [Arabidopsis
           thaliana]
          Length = 407

 Score =  120 bits (300), Expect = 2e-25
 Identities = 61/123 (49%), Positives = 75/123 (60%), Gaps = 1/123 (0%)
 Frame = +1

Query: 79  AVACSPTDSTLVAAGGSGTGAFLWNINQGDQRQVIIGHXXXXXXXXXXXXGKFLACGTGQ 258
           A+ACSPTD+TLVA GG    AFLW I  GD    + GH            G+ LA G   
Sbjct: 75  ALACSPTDATLVATGGGDDKAFLWKIGNGDWAAELPGHKDSVSCLAFSYDGQLLASGGLD 134

Query: 259 GRVQVWDICSSSHKRTFDGP-EDIEWVRWHPRGHFVLAGSMDDFTVWLWDIDEDAYLYTF 435
           G VQ++D  S + K   DGP   IEWVRWHPRGH VLAGS +D ++W+W+ D++AYL  F
Sbjct: 135 GVVQIFDASSGTLKCVLDGPGAGIEWVRWHPRGHIVLAGS-EDCSLWMWNADKEAYLNMF 193

Query: 436 FGH 444
            GH
Sbjct: 194 SGH 196


>ref|XP_002327217.1| predicted protein [Populus trichocarpa] gi|222835587|gb|EEE74022.1|
           predicted protein [Populus trichocarpa]
          Length = 378

 Score =  120 bits (300), Expect = 2e-25
 Identities = 61/123 (49%), Positives = 72/123 (58%), Gaps = 1/123 (0%)
 Frame = +1

Query: 82  VACSPTDSTLVAAGGSGTGAFLWNINQGDQRQVIIGHXXXXXXXXXXXXGKFLACGTGQG 261
           VACSP D  LVA GG     FLW I  GD    + GH            G+ LA G   G
Sbjct: 54  VACSPADPLLVATGGGDDKGFLWKIGLGDWAAELKGHKESVSSLTFSSDGQLLASGGFDG 113

Query: 262 RVQVWDICSSSHKRTFDGP-EDIEWVRWHPRGHFVLAGSMDDFTVWLWDIDEDAYLYTFF 438
            VQ+WD  S + K   +GP E IEWVRWHP+GH VLAGS +D TVW+W+ D+ AYL +F 
Sbjct: 114 IVQIWDASSGNLKCVLEGPDEGIEWVRWHPKGHLVLAGS-EDKTVWMWNADKGAYLNSFA 172

Query: 439 GHE 447
           GHE
Sbjct: 173 GHE 175