BLASTX nr result

ID: Coptis24_contig00035925 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00035925
         (328 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270295.2| PREDICTED: receptor-like serine/threonine-pr...   154   7e-36
emb|CBI25711.3| unnamed protein product [Vitis vinifera]              154   7e-36
gb|ADG01664.1| ARK3 [Arabidopsis thaliana] gi|295322442|gb|ADG01...   151   5e-35
ref|XP_002304966.1| predicted protein [Populus trichocarpa] gi|2...   151   5e-35
gb|ADG01682.1| ARK3 [Arabidopsis thaliana]                            150   1e-34

>ref|XP_002270295.2| PREDICTED: receptor-like serine/threonine-protein kinase SD1-8-like
           [Vitis vinifera]
          Length = 866

 Score =  154 bits (389), Expect = 7e-36
 Identities = 64/107 (59%), Positives = 78/107 (72%)
 Frame = +3

Query: 6   LQRLTWLGDKEGWKRYWDAPKDQCDKYKNCGVYGICDATESPICKCTKGFQPRNLREWNL 185
           LQR TW+  ++ W  YW APKDQCD Y+ CG YGICD   SP+CKC +GF+P+N + WNL
Sbjct: 288 LQRYTWIETRQVWNLYWFAPKDQCDDYRECGPYGICDTNSSPVCKCPRGFEPKNPQAWNL 347

Query: 186 RDGSGGCVRKKNFVCGKDDGFLKLKGMKLPDTSKTFVDTSMNLKECK 326
           RDGS GC RK  F C   DGFL LK MKLP+T  +FVD SM+LK+C+
Sbjct: 348 RDGSDGCSRKTEFDCNNGDGFLALKRMKLPETGSSFVDKSMSLKDCE 394


>emb|CBI25711.3| unnamed protein product [Vitis vinifera]
          Length = 619

 Score =  154 bits (389), Expect = 7e-36
 Identities = 64/107 (59%), Positives = 78/107 (72%)
 Frame = +3

Query: 6   LQRLTWLGDKEGWKRYWDAPKDQCDKYKNCGVYGICDATESPICKCTKGFQPRNLREWNL 185
           LQR TW+  ++ W  YW APKDQCD Y+ CG YGICD   SP+CKC +GF+P+N + WNL
Sbjct: 41  LQRYTWIETRQVWNLYWFAPKDQCDDYRECGPYGICDTNSSPVCKCPRGFEPKNPQAWNL 100

Query: 186 RDGSGGCVRKKNFVCGKDDGFLKLKGMKLPDTSKTFVDTSMNLKECK 326
           RDGS GC RK  F C   DGFL LK MKLP+T  +FVD SM+LK+C+
Sbjct: 101 RDGSDGCSRKTEFDCNNGDGFLALKRMKLPETGSSFVDKSMSLKDCE 147


>gb|ADG01664.1| ARK3 [Arabidopsis thaliana] gi|295322442|gb|ADG01694.1| ARK3
           [Arabidopsis thaliana]
          Length = 432

 Score =  151 bits (382), Expect = 5e-35
 Identities = 63/107 (58%), Positives = 78/107 (72%)
 Frame = +3

Query: 6   LQRLTWLGDKEGWKRYWDAPKDQCDKYKNCGVYGICDATESPICKCTKGFQPRNLREWNL 185
           LQR TW+   + W ++W APKDQCD+YK CGVYG CD+  SP+C C KGF+PRN + W L
Sbjct: 273 LQRFTWIETAQNWNQFWYAPKDQCDEYKECGVYGYCDSNTSPVCNCIKGFKPRNPQVWGL 332

Query: 186 RDGSGGCVRKKNFVCGKDDGFLKLKGMKLPDTSKTFVDTSMNLKECK 326
           RDGS GCVRK    CG  DGF++LK MKLPDT++  VD  + LKEC+
Sbjct: 333 RDGSDGCVRKTLLSCGGGDGFVRLKKMKLPDTTRASVDRGIGLKECE 379


>ref|XP_002304966.1| predicted protein [Populus trichocarpa] gi|222847930|gb|EEE85477.1|
           predicted protein [Populus trichocarpa]
          Length = 834

 Score =  151 bits (382), Expect = 5e-35
 Identities = 64/107 (59%), Positives = 80/107 (74%)
 Frame = +3

Query: 6   LQRLTWLGDKEGWKRYWDAPKDQCDKYKNCGVYGICDATESPICKCTKGFQPRNLREWNL 185
           LQR  W+ + + W ++W APKDQCD YK CG YGICD+  SP+CKC KGFQP+N + W+L
Sbjct: 265 LQRFAWIPETQQWNKFWYAPKDQCDNYKECGAYGICDSNASPVCKCLKGFQPKNHQAWDL 324

Query: 186 RDGSGGCVRKKNFVCGKDDGFLKLKGMKLPDTSKTFVDTSMNLKECK 326
           RDGSGGCVRK N  C KD  FL +K MKLP ++ +FVD SM+LK C+
Sbjct: 325 RDGSGGCVRKTNLECLKDK-FLHMKNMKLPQSTTSFVDRSMSLKNCE 370


>gb|ADG01682.1| ARK3 [Arabidopsis thaliana]
          Length = 432

 Score =  150 bits (379), Expect = 1e-34
 Identities = 63/107 (58%), Positives = 77/107 (71%)
 Frame = +3

Query: 6   LQRLTWLGDKEGWKRYWDAPKDQCDKYKNCGVYGICDATESPICKCTKGFQPRNLREWNL 185
           LQR TW+   + W ++W APKDQCD+YK CGVYG CD+  SP+C C KGF+PRN + W L
Sbjct: 273 LQRFTWIETAQNWNQFWYAPKDQCDEYKECGVYGYCDSNTSPVCNCIKGFKPRNPQVWGL 332

Query: 186 RDGSGGCVRKKNFVCGKDDGFLKLKGMKLPDTSKTFVDTSMNLKECK 326
           RDGS GCVRK    CG  DGF++LK MKLPDT+   VD  + LKEC+
Sbjct: 333 RDGSDGCVRKTLLSCGGGDGFVRLKKMKLPDTTMASVDRGIGLKECE 379


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