BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00035918
         (396 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003614764.1| hypothetical protein MTR_5g058930 [Medicago ...    67   2e-09
gb|ABD33259.2| non-LTR retroelement reverse transcriptase-like p...    66   3e-09
ref|XP_003629423.1| hypothetical protein MTR_8g077330 [Medicago ...    64   1e-08
ref|XP_003598208.1| hypothetical protein MTR_3g008460 [Medicago ...    64   1e-08
ref|XP_002299084.1| predicted protein [Populus trichocarpa] gi|2...    63   2e-08

>ref|XP_003614764.1| hypothetical protein MTR_5g058930 [Medicago truncatula]
           gi|355516099|gb|AES97722.1| hypothetical protein
           MTR_5g058930 [Medicago truncatula]
          Length = 154

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 31/90 (34%), Positives = 48/90 (53%)
 Frame = +3

Query: 33  PETENHLFFRCNFASTVWNLLLQRMGFNRAVALTWEGELEWVVSVTRGKGCIQDGFRIVW 212
           PET NHLFF C+    VW+ + QR+G +                +T         F+++W
Sbjct: 31  PETTNHLFFSCDIFGIVWHRVYQRLGVSFISPNASRDHFHQFGHMTGFPRATHSFFKVIW 90

Query: 213 NAFMYMIWKARNDRIFNNKNADAHQMLENV 302
           +A ++ +WK RN++IF NK  D  Q+L+NV
Sbjct: 91  HACVWTVWKERNNKIFKNKAWDLTQLLDNV 120


>gb|ABD33259.2| non-LTR retroelement reverse transcriptase-like protein, related
           [Medicago truncatula]
          Length = 196

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 33/100 (33%), Positives = 50/100 (50%)
 Frame = +3

Query: 12  CVLCWLMPETENHLFFRCNFASTVWNLLLQRMGFNRAVALTWEGELEWVVSVTRGKGCIQ 191
           CVLC    ET +HLFF C++A  VW  +++ M      +  W   L+++ S       + 
Sbjct: 78  CVLCTKENETHSHLFFSCDYADAVWKGVMRWMNMTVNTS-NWHSILQYIQSHCNSNNGMH 136

Query: 192 DGFRIVWNAFMYMIWKARNDRIFNNKNADAHQMLENVIRD 311
              R+V +  +Y+IWK RNDR F N      Q+L  +  D
Sbjct: 137 QAHRMVLSETLYVIWKERNDRKFQNCYRSVQQLLNQIKMD 176


>ref|XP_003629423.1| hypothetical protein MTR_8g077330 [Medicago truncatula]
           gi|355523445|gb|AET03899.1| hypothetical protein
           MTR_8g077330 [Medicago truncatula]
          Length = 194

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 32/99 (32%), Positives = 55/99 (55%), Gaps = 1/99 (1%)
 Frame = +3

Query: 9   TCVLCWLMPETENHLFFRCNFASTVWNLLLQRMGFNRAVALTWEGELE-WVVSVTRGKGC 185
           TCVLC    E+  +LF  C  AS VW +++  +G N  +       LE W   +   K  
Sbjct: 37  TCVLCDEFVESLTYLFLHCLVASKVWRMIMSSLGINFIIPHNLFVHLECWRGEIVDKK-- 94

Query: 186 IQDGFRIVWNAFMYMIWKARNDRIFNNKNADAHQMLENV 302
           ++ GF ++W+A ++++WK R +RIF N   +  +M+E++
Sbjct: 95  LKKGFMLIWHATIWVMWKTRKERIFKNVVKEVGEMVEDI 133


>ref|XP_003598208.1| hypothetical protein MTR_3g008460 [Medicago truncatula]
           gi|355487256|gb|AES68459.1| hypothetical protein
           MTR_3g008460 [Medicago truncatula]
          Length = 322

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 40/123 (32%), Positives = 61/123 (49%), Gaps = 6/123 (4%)
 Frame = +3

Query: 6   DTCVLCWLMPETENHLFFRCNFASTVWNLLLQRMGFNRAVA----LTWEGELEWVVSVTR 173
           + CV C  + ET +HLF  C+ A  VW  ++  +  N  +     + WE    W      
Sbjct: 124 NNCVWCVEVVETSSHLFLHCDMARNVWLNVMLWLDLNFVMPPNLIIHWEC---WSGGSIN 180

Query: 174 GKGCIQDGFRIVWNAFMYMIWKARNDRIFNNKNADAHQMLENV--IRDTRTKLLGMNITM 347
            K  I  G R++W   +++IWKARN RIFNN+NA   +++E V    D    L+G+ +  
Sbjct: 181 KK--IWKGLRMIWEVVIWVIWKARNGRIFNNENARWDELVEEVWLSIDALRGLVGIGVLW 238

Query: 348 TQG 356
             G
Sbjct: 239 AAG 241


>ref|XP_002299084.1| predicted protein [Populus trichocarpa] gi|222846342|gb|EEE83889.1|
            predicted protein [Populus trichocarpa]
          Length = 949

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 35/102 (34%), Positives = 53/102 (51%), Gaps = 1/102 (0%)
 Frame = +3

Query: 3    ADTCVLCWLMPETENHLFFRCNFASTVWNLLLQRMGFNRAVALTWEGELEWVVSVTR-GK 179
            + TCVLC +  ET +HLFF+C ++S +W  +  +       +LTW G L W  S  R  K
Sbjct: 821  SSTCVLCGMHNETHDHLFFQCTYSSILWGNISAKT-LIAWPSLTWNGLLLWAGSTLRNNK 879

Query: 180  GCIQDGFRIVWNAFMYMIWKARNDRIFNNKNADAHQMLENVI 305
                   R+V +  +Y IW  RN+RIFN     A + ++  +
Sbjct: 880  EFSHIIARLVLSTSVYFIWFERNNRIFNKVFKTAQERMDEAV 921