BLASTX nr result

ID: Coptis24_contig00035917 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00035917
         (211 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003538878.1| PREDICTED: uncharacterized protein LOC100805...    69   4e-10
ref|XP_003517176.1| PREDICTED: uncharacterized protein LOC100818...    68   9e-10
gb|AFK46137.1| unknown [Lotus japonicus]                               67   2e-09
ref|XP_003612165.1| hypothetical protein MTR_5g022010 [Medicago ...    66   3e-09
ref|NP_001065490.1| Os10g0577400 [Oryza sativa Japonica Group] g...    65   7e-09

>ref|XP_003538878.1| PREDICTED: uncharacterized protein LOC100805416 [Glycine max]
          Length = 346

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 36/57 (63%), Positives = 42/57 (73%), Gaps = 4/57 (7%)
 Frame = +2

Query: 2   PDFEGKHIRFVYNSDGEL-KGEVVVN---SVASPSVLRLKGMPVPEGKHLRFPEEEE 160
           P FEGKH RFVYNSD E+ K EV  N   S +S  +LRLKG+P P+GKHLRF EEE+
Sbjct: 285 PKFEGKHTRFVYNSDDEIVKEEVEENFGESASSTKILRLKGLPTPKGKHLRFYEEED 341


>ref|XP_003517176.1| PREDICTED: uncharacterized protein LOC100818852 [Glycine max]
          Length = 343

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 36/57 (63%), Positives = 42/57 (73%), Gaps = 4/57 (7%)
 Frame = +2

Query: 2   PDFEGKHIRFVYNSDGEL-KGEVVVN---SVASPSVLRLKGMPVPEGKHLRFPEEEE 160
           P FEGKH RF YNSD E+ K EV  N   S +S ++LRLKG+P P+GKHLRF EEEE
Sbjct: 282 PKFEGKHTRFAYNSDDEIVKEEVEENFGESDSSSNILRLKGLPTPKGKHLRFYEEEE 338


>gb|AFK46137.1| unknown [Lotus japonicus]
          Length = 335

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 35/56 (62%), Positives = 39/56 (69%), Gaps = 3/56 (5%)
 Frame = +2

Query: 2   PDFEGKHIRFVYNSDGELKGEVVV---NSVASPSVLRLKGMPVPEGKHLRFPEEEE 160
           P F GKH RFVYNSD EL  EV V    S +S +VL L G+P P+GKHLRF EEEE
Sbjct: 277 PKFSGKHTRFVYNSDEELVEEVEVVMSESDSSDNVLHLMGLPTPKGKHLRFSEEEE 332


>ref|XP_003612165.1| hypothetical protein MTR_5g022010 [Medicago truncatula]
           gi|355513500|gb|AES95123.1| hypothetical protein
           MTR_5g022010 [Medicago truncatula]
          Length = 289

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 35/59 (59%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
 Frame = +2

Query: 2   PDFEGKHIRFVYNSDGELKGEVVVNS--VASPSVLRLKGMPVPEGKHLRFPEEEE*GSN 172
           P F GKH RFVYNSD EL  E    S    S +VL LKG+P P+GKHLRF EEEE G +
Sbjct: 229 PKFAGKHTRFVYNSDDELVSEEEDESGNADSHNVLHLKGLPTPKGKHLRFSEEEEEGKS 287


>ref|NP_001065490.1| Os10g0577400 [Oryza sativa Japonica Group]
           gi|18057160|gb|AAL58183.1|AC027037_5 putative
           hypersensitive reaction and pathogenicity protein [Oryza
           sativa Japonica Group]
           gi|18266645|gb|AAL67591.1|AC018929_13 putative proline
           and glutamic acid rich nuclear protein [Oryza sativa
           Japonica Group] gi|31433675|gb|AAP55159.1| expressed
           protein [Oryza sativa Japonica Group]
           gi|113640022|dbj|BAF27327.1| Os10g0577400 [Oryza sativa
           Japonica Group] gi|125575800|gb|EAZ17084.1| hypothetical
           protein OsJ_32582 [Oryza sativa Japonica Group]
           gi|215768555|dbj|BAH00784.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 350

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 29/53 (54%), Positives = 38/53 (71%)
 Frame = +2

Query: 2   PDFEGKHIRFVYNSDGELKGEVVVNSVASPSVLRLKGMPVPEGKHLRFPEEEE 160
           P F+GKH RF+Y+SDGE++ E V +       + L+G+PVPEGKHLRF E EE
Sbjct: 295 PAFQGKHTRFIYDSDGEMEREDVAHVPVENCTMVLRGLPVPEGKHLRFHEVEE 347


Top