BLASTX nr result

ID: Coptis24_contig00035915 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00035915
         (329 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN78967.1| hypothetical protein VITISV_027273 [Vitis vinifera]    80   2e-13
ref|XP_002328708.1| predicted protein [Populus trichocarpa] gi|2...    65   6e-09
ref|XP_003614032.1| hypothetical protein MTR_5g043940 [Medicago ...    62   5e-08
emb|CAN71609.1| hypothetical protein VITISV_013246 [Vitis vinifera]    59   4e-07
emb|CAN76141.1| hypothetical protein VITISV_028763 [Vitis vinifera]    58   9e-07

>emb|CAN78967.1| hypothetical protein VITISV_027273 [Vitis vinifera]
          Length = 1163

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 38/94 (40%), Positives = 59/94 (62%)
 Frame = -3

Query: 327  ELDESKKETTLGRIASDEFRNKKTKWKKNFYSRYTTYEERIAHKPEQLSQQEWVNLVQFW 148
            EL+E+ K   L +   + FR+ + K K  +Y+ Y T EER+  +P  LS  +W  L+ FW
Sbjct: 898  ELEETCKSYIL-QCCGNLFRSYRNKMKAKYYNPYNTDEERLCQRPPHLSDDDWRWLIHFW 956

Query: 147  DSPEHQVISERNKRNRSKQIAKHTSGRKGFPEMR 46
             +PE + IS++NK NR+KQ+ KHTS  K + ++R
Sbjct: 957  GTPEAKDISDKNKANRAKQVIKHTSRSKSYAQIR 990


>ref|XP_002328708.1| predicted protein [Populus trichocarpa] gi|222839006|gb|EEE77357.1|
           predicted protein [Populus trichocarpa]
          Length = 327

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 31/89 (34%), Positives = 52/89 (58%)
 Frame = -3

Query: 306 ETTLGRIASDEFRNKKTKWKKNFYSRYTTYEERIAHKPEQLSQQEWVNLVQFWDSPEHQV 127
           +T + R  + ++RN K K K   Y  + T EER+  +  ++  ++W  L+ +W+S E Q+
Sbjct: 75  KTWVLRSLASKWRNWKAKLKSEHYYPHKTDEERLNDRDRRVLPEQWAILISYWNSEEAQL 134

Query: 126 ISERNKRNRSKQIAKHTSGRKGFPEMRAQ 40
            S +NK NRS Q + HT+G K F  +R +
Sbjct: 135 RSAKNKANRSNQKSTHTAGSKSFARIREE 163


>ref|XP_003614032.1| hypothetical protein MTR_5g043940 [Medicago truncatula]
           gi|355515367|gb|AES96990.1| hypothetical protein
           MTR_5g043940 [Medicago truncatula]
          Length = 714

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 30/98 (30%), Positives = 57/98 (58%), Gaps = 2/98 (2%)
 Frame = -3

Query: 288 IASDEFRNKKTKWKKNFYSRYTTYEERIAHKPEQLSQQEWVNLVQFWDSPEHQVISERNK 109
           I SD +R  K   KKN +++Y T  ER+ ++PE++ ++++  L+ +W     Q +S +N 
Sbjct: 443 IVSDAWRRYKYLIKKNHFTKYKTMHERLKNRPEEVPEEDFKKLLVYWRDRNSQEVSLQNA 502

Query: 108 RNRSKQIAKHTSGRKGFPEMR--AQIIREEGAPPSQGD 1
           +N ++   +H +G K F  +R   ++  E+  PPSQ +
Sbjct: 503 QNIAQLKWRHRTGNKAFAVIREKMRVSNEDKEPPSQAE 540


>emb|CAN71609.1| hypothetical protein VITISV_013246 [Vitis vinifera]
          Length = 1277

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 32/93 (34%), Positives = 51/93 (54%), Gaps = 2/93 (2%)
 Frame = -3

Query: 327  ELDESKKETTLGRIASDEFRNKKTKWKKNFYSRYTTYEERIAHKPEQLSQQEWVNLVQFW 148
            EL+E+ K   L +   + FR+ + K K  +Y+ Y T EER+ H+P  LS  +W  L+ FW
Sbjct: 994  ELEETXKSYIL-QCCGNLFRSYRNKMKAKYYNPYNTDEERLCHRPPHLSDDDWRWLIHFW 1052

Query: 147  DSPE--HQVISERNKRNRSKQIAKHTSGRKGFP 55
             +PE   Q   +R++ NR +  A   + + G P
Sbjct: 1053 STPEAKAQKKEDRSEPNRIEMFALTHTRKDGTP 1085


>emb|CAN76141.1| hypothetical protein VITISV_028763 [Vitis vinifera]
          Length = 877

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 32/93 (34%), Positives = 51/93 (54%), Gaps = 2/93 (2%)
 Frame = -3

Query: 327 ELDESKKETTLGRIASDEFRNKKTKWKKNFYSRYTTYEERIAHKPEQLSQQEWVNLVQFW 148
           EL+E+ K   L +   + FR+ + K K  +Y+ Y T EER+ H+P  LS  +W  L+ FW
Sbjct: 672 ELEETCKSYIL-QCCGNLFRSYRXKMKAKYYNPYNTDEERLCHRPPHLSDDDWRWLIHFW 730

Query: 147 DSPE--HQVISERNKRNRSKQIAKHTSGRKGFP 55
            +PE   Q   +R++ NR +  A   + + G P
Sbjct: 731 GTPEAKXQKKEDRSEPNRIEMFALTHTRKDGTP 763


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